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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1801 A_BomoFB_comp10385_c1_seq1
482bp
 cecropin-B_precursor_[Bombyx_mori]
GO:0002376 P immune system process
GO:0005576 C extracellular region
GO:0042742 P defense response to bacterium
GO:0045087 P innate immune response
FPKM:435.70 TPM:477.40
1802 A_BomoFB_comp10386_c0_seq1
658bp
FPKM:1.71 TPM:1.88
1803 A_BomoFB_comp10386_c0_seq2
285bp
FPKM:1.32 TPM:1.44
1804 A_BomoFB_comp10386_c0_seq3
362bp
FPKM:1.05 TPM:1.15
1805 A_BomoFB_comp10386_c0_seq4
4307bp
 PREDICTED:_uncharacterized_protein_LOC105391048_[Plutella_xylostella]
GO:0000166 F nucleotide binding
GO:0000943 C retrotransposon nucleocapsid
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0004540 F ribonuclease activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0019076 P viral release from host cell
GO:0032197 P transposition, RNA-mediated
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
FPKM:5.25 TPM:5.76
1806 A_BomoFB_comp10387_c0_seq1
1886bp
 cytochrome_P450_[Bombyx_mori]
GO:0004497 F monooxygenase activity
GO:0005506 F iron ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 F heme binding
GO:0031090 C organelle membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
GO:0070330 F aromatase activity
FPKM:12.98 TPM:14.22
1807 A_BomoFB_comp10388_c0_seq1
1930bp
 PREDICTED:_rhomboid-related_protein_2-like_isoform_X1_[Bombyx_mori]
FPKM:3.83 TPM:4.19
1808 A_BomoFB_comp10388_c0_seq2
1762bp
 PREDICTED:_rhomboid-related_protein_2-like_isoform_X1_[Bombyx_mori]
FPKM:0.76 TPM:0.83
1809 A_BomoFB_comp103894_c0_seq1
611bp
FPKM:2.66 TPM:2.92
1810 A_BomoFB_comp10389_c0_seq1
504bp
FPKM:4.74 TPM:5.19
1811 A_BomoFB_comp10389_c1_seq1
7533bp
 PREDICTED:_kalirin_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0035023 P regulation of Rho protein signal transduction
GO:0043547 P positive regulation of GTPase activity
FPKM:2.26 TPM:2.47
1812 A_BomoFB_comp10389_c1_seq2
7086bp
 PREDICTED:_kalirin_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0035023 P regulation of Rho protein signal transduction
GO:0043547 P positive regulation of GTPase activity
FPKM:10.50 TPM:11.51
1813 A_BomoFB_comp1038_c0_seq1
247bp
 Uncharacterized_protein_OBRU01_02090_[Operophtera_brumata]
FPKM:2.38 TPM:2.61
1814 A_BomoFB_comp10390_c0_seq1
649bp
 titin1_[Bombyx_mori]
FPKM:11.65 TPM:12.77
1815 A_BomoFB_comp103911_c0_seq1
605bp
 PREDICTED:_DENN_domain-containing_protein_4C_isoform_X4_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0017112 F guanyl-nucleotide exchange factor activity
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0032593 C insulin-responsive compartment
GO:0032869 P cellular response to insulin stimulus
GO:0043547 P positive regulation of GTPase activity
GO:0072659 P protein localization to plasma membrane
FPKM:5.02 TPM:5.50
1816 A_BomoFB_comp10391_c0_seq1
326bp
 hypothetical_protein_KGM_11676_[Danaus_plexippus]
FPKM:0.00 TPM:0.00
1817 A_BomoFB_comp10391_c0_seq2
1607bp
 PREDICTED:_regulator_of_chromosome_condensation-like_[Papilio_xuthus]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0043547 P positive regulation of GTPase activity
GO:0051301 P cell division
FPKM:0.00 TPM:0.00
1818 A_BomoFB_comp10391_c0_seq3
749bp
 hypothetical_protein_KGM_11676_[Danaus_plexippus]
FPKM:1.06 TPM:1.16
1819 A_BomoFB_comp10391_c0_seq4
1184bp
 PREDICTED:_regulator_of_chromosome_condensation-like_[Papilio_xuthus]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0043547 P positive regulation of GTPase activity
GO:0051301 P cell division
FPKM:1.22 TPM:1.34
1820 A_BomoFB_comp10391_c0_seq5
316bp
FPKM:1.62 TPM:1.78
1821 A_BomoFB_comp10391_c0_seq6
387bp
 hypothetical_protein_KGM_11676_[Danaus_plexippus]
FPKM:0.00 TPM:0.00
1822 A_BomoFB_comp10391_c0_seq7
493bp
 hypothetical_protein_KGM_11676_[Danaus_plexippus]
FPKM:0.00 TPM:0.00
1823 A_BomoFB_comp10391_c0_seq8
810bp
 hypothetical_protein_KGM_11676_[Danaus_plexippus]
FPKM:0.00 TPM:0.00
1824 A_BomoFB_comp10391_c0_seq9
1290bp
 PREDICTED:_regulator_of_chromosome_condensation-like_[Papilio_xuthus]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0043547 P positive regulation of GTPase activity
GO:0051301 P cell division
FPKM:4.73 TPM:5.19
1825 A_BomoFB_comp10392_c0_seq1
1225bp
FPKM:5.68 TPM:6.22
1826 A_BomoFB_comp10392_c1_seq1
317bp
 hypothetical_protein_[Paramecium_tetraurelia_strain_d4-2]
FPKM:6.04 TPM:6.61
1827 A_BomoFB_comp10392_c2_seq1
479bp
 olfactory_receptor_[Bombyx_mori]
FPKM:4.44 TPM:4.86
1828 A_BomoFB_comp10392_c2_seq10
3487bp
 PREDICTED:_beta-N-acetylglucosaminidase_1_isoform_X1_[Bombyx_mori]
GO:0000272 P polysaccharide catabolic process
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004563 F beta-N-acetylhexosaminidase activity
GO:0005575 C cellular_component
GO:0005975 P carbohydrate metabolic process
GO:0006032 P chitin catabolic process
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
FPKM:0.00 TPM:0.00
1829 A_BomoFB_comp10392_c2_seq11
2422bp
 PREDICTED:_protein_transport_protein_Sec24A_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0002474 P antigen processing and presentation of peptide antigen via MHC class I
GO:0003674 F molecular_function
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0008270 F zinc ion binding
GO:0012507 C ER to Golgi transport vesicle membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0019886 P antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0030127 C COPII vesicle coat
GO:0045714 P obsolete regulation of low-density lipoprotein particle receptor biosynthetic process
GO:0048208 P COPII vesicle coating
GO:0048471 C perinuclear region of cytoplasm
GO:0050714 P positive regulation of protein secretion
GO:2000189 P cholesterol homeostasis
FPKM:1.07 TPM:1.17
1830 A_BomoFB_comp10392_c2_seq12
452bp
FPKM:2.25 TPM:2.47
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