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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1771 A_BomoFB_comp10378_c0_seq9
646bp
FPKM:0.82 TPM:0.90
1772 A_BomoFB_comp10379_c0_seq1
5718bp
 PREDICTED:_laminin_subunit_beta-1_[Bombyx_mori]
GO:0003143 P embryonic heart tube morphogenesis
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005604 C basement membrane
GO:0005605 C basement membrane
GO:0007155 P cell adhesion
GO:0008406 P gonad development
GO:0009887 P animal organ morphogenesis
GO:0009888 P tissue development
GO:0012505 C endomembrane system
GO:0016477 P cell migration
GO:0030198 P extracellular matrix organization
GO:0031012 C extracellular matrix
GO:0033627 P cell adhesion mediated by integrin
GO:0034446 P substrate adhesion-dependent cell spreading
GO:0045089 P positive regulation of innate immune response
GO:0048513 P animal organ development
GO:0048598 P embryonic morphogenesis
GO:0050829 P defense response to Gram-negative bacterium
GO:0055013 P cardiac muscle cell development
GO:0070831 P basement membrane assembly
FPKM:12.75 TPM:13.97
1773 A_BomoFB_comp10380_c0_seq1
910bp
FPKM:2.29 TPM:2.50
1774 A_BomoFB_comp10380_c0_seq2
771bp
FPKM:0.00 TPM:0.00
1775 A_BomoFB_comp10380_c0_seq3
1448bp
FPKM:0.07 TPM:0.08
1776 A_BomoFB_comp10380_c0_seq4
1567bp
FPKM:1.79 TPM:1.96
1777 A_BomoFB_comp10380_c0_seq5
890bp
FPKM:0.00 TPM:0.00
1778 A_BomoFB_comp10380_c0_seq6
493bp
FPKM:7.00 TPM:7.68
1779 A_BomoFB_comp10380_c0_seq7
374bp
FPKM:1.70 TPM:1.87
1780 A_BomoFB_comp10380_c0_seq8
234bp
FPKM:0.95 TPM:1.05
1781 A_BomoFB_comp10380_c0_seq9
1029bp
FPKM:0.00 TPM:0.00
1782 A_BomoFB_comp10380_c1_seq1
273bp
 hypothetical_protein_SCHCODRAFT_80995_[Schizophyllum_commune_H4-8]
FPKM:4.11 TPM:4.50
1783 A_BomoFB_comp10381_c0_seq1
5020bp
 PREDICTED:_plasma_membrane_calcium-transporting_ATPase_2_isoform_X3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005388 F P-type calcium transporter activity
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006816 P calcium ion transport
GO:0006874 P cellular calcium ion homeostasis
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0030165 F PDZ domain binding
GO:0034220 P ion transmembrane transport
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0070588 P calcium ion transmembrane transport
GO:1903561 C extracellular vesicle
GO:1903779 P regulation of cardiac conduction
FPKM:4.32 TPM:4.73
1784 A_BomoFB_comp10381_c0_seq2
4813bp
 PREDICTED:_plasma_membrane_calcium-transporting_ATPase_2_isoform_X3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005388 F P-type calcium transporter activity
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006816 P calcium ion transport
GO:0006874 P cellular calcium ion homeostasis
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0030165 F PDZ domain binding
GO:0034220 P ion transmembrane transport
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0070588 P calcium ion transmembrane transport
GO:1903561 C extracellular vesicle
GO:1903779 P regulation of cardiac conduction
FPKM:0.75 TPM:0.82
1785 A_BomoFB_comp10381_c0_seq3
5026bp
 PREDICTED:_plasma_membrane_calcium-transporting_ATPase_2_isoform_X3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005388 F P-type calcium transporter activity
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006816 P calcium ion transport
GO:0006874 P cellular calcium ion homeostasis
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0030165 F PDZ domain binding
GO:0034220 P ion transmembrane transport
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0070588 P calcium ion transmembrane transport
GO:1903561 C extracellular vesicle
GO:1903779 P regulation of cardiac conduction
FPKM:1.14 TPM:1.25
1786 A_BomoFB_comp10381_c0_seq4
5176bp
 PREDICTED:_plasma_membrane_calcium-transporting_ATPase_2_isoform_X3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005388 F P-type calcium transporter activity
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006816 P calcium ion transport
GO:0006874 P cellular calcium ion homeostasis
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0030165 F PDZ domain binding
GO:0034220 P ion transmembrane transport
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0070588 P calcium ion transmembrane transport
GO:1903561 C extracellular vesicle
GO:1903779 P regulation of cardiac conduction
FPKM:1.02 TPM:1.12
1787 A_BomoFB_comp10381_c0_seq5
5389bp
 PREDICTED:_plasma_membrane_calcium-transporting_ATPase_2_isoform_X3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005388 F P-type calcium transporter activity
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006816 P calcium ion transport
GO:0006874 P cellular calcium ion homeostasis
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0030165 F PDZ domain binding
GO:0034220 P ion transmembrane transport
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0070588 P calcium ion transmembrane transport
GO:1903561 C extracellular vesicle
GO:1903779 P regulation of cardiac conduction
FPKM:1.48 TPM:1.63
1788 A_BomoFB_comp10381_c0_seq6
3716bp
 PREDICTED:_plasma_membrane_calcium-transporting_ATPase_2_isoform_X3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005388 F P-type calcium transporter activity
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006816 P calcium ion transport
GO:0006874 P cellular calcium ion homeostasis
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0030165 F PDZ domain binding
GO:0034220 P ion transmembrane transport
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0070588 P calcium ion transmembrane transport
GO:1903561 C extracellular vesicle
GO:1903779 P regulation of cardiac conduction
FPKM:0.08 TPM:0.09
1789 A_BomoFB_comp10381_c0_seq7
5233bp
 PREDICTED:_plasma_membrane_calcium-transporting_ATPase_2_isoform_X3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005388 F P-type calcium transporter activity
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006816 P calcium ion transport
GO:0006874 P cellular calcium ion homeostasis
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0030165 F PDZ domain binding
GO:0034220 P ion transmembrane transport
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0070588 P calcium ion transmembrane transport
GO:1903561 C extracellular vesicle
GO:1903779 P regulation of cardiac conduction
FPKM:5.92 TPM:6.48
1790 A_BomoFB_comp10381_c0_seq8
3929bp
 PREDICTED:_plasma_membrane_calcium-transporting_ATPase_2_isoform_X3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005388 F P-type calcium transporter activity
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006816 P calcium ion transport
GO:0006874 P cellular calcium ion homeostasis
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0030165 F PDZ domain binding
GO:0034220 P ion transmembrane transport
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0070588 P calcium ion transmembrane transport
GO:1903561 C extracellular vesicle
GO:1903779 P regulation of cardiac conduction
FPKM:0.16 TPM:0.18
1791 A_BomoFB_comp103825_c0_seq1
1372bp
 PREDICTED:_uncharacterized_protein_LOC101742101_[Bombyx_mori]
FPKM:2.83 TPM:3.10
1792 A_BomoFB_comp1038263_c0_seq1
214bp
 PREDICTED:_WD_repeat_and_FYVE_domain-containing_protein_3_[Bombyx_mori]
GO:0003831 F beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity
GO:0005515 F protein binding
GO:0005545 F 1-phosphatidylinositol binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005737 C cytoplasm
GO:0005776 C autophagosome
GO:0006914 P autophagy
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016234 C inclusion body
GO:0016239 P positive regulation of macroautophagy
GO:0016605 C PML body
GO:0019898 C extrinsic component of membrane
GO:0031965 C nuclear membrane
GO:0034274 C Atg12-Atg5-Atg16 complex
GO:0035973 P aggrephagy
GO:0046872 F metal ion binding
GO:0097635 C extrinsic component of autophagosome membrane
FPKM:2.69 TPM:2.95
1793 A_BomoFB_comp10382_c0_seq1
231bp
 ORF1_[Human_parvovirus_4]
FPKM:0.00 TPM:0.00
1794 A_BomoFB_comp10382_c1_seq1
2130bp
 PREDICTED:_synaptic_vesicle_glycoprotein_2C-like_[Papilio_xuthus]
GO:0004872 F signaling receptor activity
GO:0005215 F transporter activity
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005911 C cell-cell junction
GO:0006810 P transport
GO:0006836 P neurotransmitter transport
GO:0006874 P cellular calcium ion homeostasis
GO:0008021 C synaptic vesicle
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019901 F protein kinase binding
GO:0022857 F transmembrane transporter activity
GO:0030054 C cell junction
GO:0030672 C synaptic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0031594 C neuromuscular junction
GO:0043005 C neuron projection
GO:0045202 C synapse
GO:0048786 C presynaptic active zone
GO:0055085 P transmembrane transport
FPKM:85.78 TPM:93.99
1795 A_BomoFB_comp10383_c0_seq1
676bp
 histone_H1-like_nucleoprotein_HC2_protein_[Medicago_truncatula]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0030490 P maturation of SSU-rRNA
GO:0030686 C 90S preribosome
GO:0048471 C perinuclear region of cytoplasm
FPKM:34.12 TPM:37.38
1796 A_BomoFB_comp1038476_c0_seq1
224bp
FPKM:2.24 TPM:2.46
1797 A_BomoFB_comp10384_c0_seq1
442bp
FPKM:4.61 TPM:5.05
1798 A_BomoFB_comp10384_c0_seq2
5246bp
 PREDICTED:_importin-7_isoform_X1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006606 P protein import into nucleus
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0007165 P signal transduction
GO:0008536 F small GTPase binding
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0042393 F histone binding
GO:0045087 P innate immune response
FPKM:11.54 TPM:12.64
1799 A_BomoFB_comp10384_c1_seq1
551bp
FPKM:1.48 TPM:1.62
1800 A_BomoFB_comp10385_c0_seq1
599bp
 cecropin-A_precursor_[Bombyx_mori]
GO:0002376 P immune system process
GO:0005576 C extracellular region
GO:0042742 P defense response to bacterium
GO:0045087 P innate immune response
FPKM:15.53 TPM:17.02
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