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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1441 A_BomoFB_comp10327_c1_seq5
1176bp
 reverse_transcriptase_[Bombyx_mori]
FPKM:2.28 TPM:2.50
1442 A_BomoFB_comp10327_c1_seq6
512bp
 reverse_transcriptase_[Bombyx_mori]
FPKM:17.43 TPM:19.09
1443 A_BomoFB_comp10327_c2_seq1
369bp
FPKM:0.87 TPM:0.96
1444 A_BomoFB_comp10328_c0_seq1
290bp
 reverse_transcriptase_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:6.87 TPM:7.53
1445 A_BomoFB_comp10328_c0_seq2
211bp
 reverse_transcriptase_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:10.83 TPM:11.86
1446 A_BomoFB_comp10328_c0_seq3
249bp
 reverse_transcriptase_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:0.30 TPM:0.33
1447 A_BomoFB_comp10328_c0_seq4
231bp
 reverse_transcriptase_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:0.00 TPM:0.00
1448 A_BomoFB_comp10328_c0_seq5
389bp
 reverse_transcriptase_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:16.14 TPM:17.68
1449 A_BomoFB_comp103293_c0_seq1
1883bp
 PREDICTED:_ATP-dependent_RNA_helicase_DDX24_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003724 F RNA helicase activity
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005730 C nucleolus
GO:0010501 P RNA secondary structure unwinding
GO:0016020 C membrane
GO:0016070 P RNA metabolic process
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
FPKM:3.03 TPM:3.32
1450 A_BomoFB_comp10329_c0_seq1
533bp
 hypothetical_protein_H310_09960_[Aphanomyces_invadans]
FPKM:0.00 TPM:0.00
1451 A_BomoFB_comp10329_c0_seq2
469bp
 PREDICTED:_transmembrane_and_TPR_repeat-containing_protein_1-like_[Bombyx_mori]
FPKM:2.85 TPM:3.12
1452 A_BomoFB_comp10329_c0_seq3
227bp
 heat-shock_protein_Hsp20_[Meiothermus_silvanus]
FPKM:0.00 TPM:0.00
1453 A_BomoFB_comp10329_c0_seq4
810bp
FPKM:12.47 TPM:13.66
1454 A_BomoFB_comp10329_c0_seq5
210bp
 heat-shock_protein_Hsp20_[Meiothermus_silvanus]
FPKM:0.00 TPM:0.00
1455 A_BomoFB_comp10329_c0_seq6
259bp
FPKM:20.53 TPM:22.49
1456 A_BomoFB_comp1033067_c0_seq1
207bp
 hemolin_[Bombyx_mori]
GO:0002376 P immune system process
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0045087 P innate immune response
FPKM:1.55 TPM:1.70
1457 A_BomoFB_comp10330_c0_seq1
1367bp
 PREDICTED:_SAYSvFN_domain-containing_protein_1_[Amyelois_transitella]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0043231 C intracellular membrane-bounded organelle
FPKM:2.43 TPM:2.66
1458 A_BomoFB_comp10330_c0_seq10
703bp
FPKM:0.00 TPM:0.00
1459 A_BomoFB_comp10330_c0_seq11
639bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC105841478_[Bombyx_mori]
FPKM:0.00 TPM:0.00
1460 A_BomoFB_comp10330_c0_seq12
436bp
 hypothetical_protein_M437DRAFT_48791_[Aureobasidium_melanogenum_CBS_110374]
FPKM:2.15 TPM:2.35
1461 A_BomoFB_comp10330_c0_seq2
1565bp
 PREDICTED:_SAYSvFN_domain-containing_protein_1_[Amyelois_transitella]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0043231 C intracellular membrane-bounded organelle
FPKM:0.35 TPM:0.39
1462 A_BomoFB_comp10330_c0_seq3
1144bp
 PREDICTED:_SAYSvFN_domain-containing_protein_1_[Amyelois_transitella]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0043231 C intracellular membrane-bounded organelle
FPKM:0.00 TPM:0.00
1463 A_BomoFB_comp10330_c0_seq4
416bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC105841478_[Bombyx_mori]
FPKM:2.56 TPM:2.81
1464 A_BomoFB_comp10330_c0_seq5
505bp
FPKM:0.00 TPM:0.00
1465 A_BomoFB_comp10330_c0_seq6
224bp
 hypothetical_protein_PV04_07601_[Capronia_semiimmersa]
FPKM:2.24 TPM:2.46
1466 A_BomoFB_comp10330_c0_seq7
720bp
FPKM:2.32 TPM:2.54
1467 A_BomoFB_comp10330_c0_seq8
837bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC105841478_[Bombyx_mori]
FPKM:0.00 TPM:0.00
1468 A_BomoFB_comp10330_c0_seq9
522bp
FPKM:0.00 TPM:0.00
1469 A_BomoFB_comp10330_c1_seq1
268bp
FPKM:1.86 TPM:2.03
1470 A_BomoFB_comp10331_c0_seq1
1260bp
 PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_16_[Bombyx_mori]
GO:0004843 F thiol-dependent deubiquitinase
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008270 F zinc ion binding
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0036459 F thiol-dependent deubiquitinase
GO:0046872 F metal ion binding
FPKM:1.20 TPM:1.32
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