SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp10331_c0_seq1
Scaffold_idBomo_Chr3
NCBI non-redundant
(nr)		PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_16_[Bombyx_mori]
Ontology
GO:0004843 F thiol-dependent deubiquitinase
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008270 F zinc ion binding
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0036459 F thiol-dependent deubiquitinase
GO:0046872 F metal ion binding
Transcript
Level		FPKM:1.20 TPM:1.32
ORF EntryO_BomoFB13158_5prime_partial:A_BomoFB_comp10331_c0_seq1
Sequence
(Nucleotide)
CCGCGCGGCAGGAAGCAGGGCGAGCCGCGGGCGCCGCGCCGCAGCTTCACGTAGGCGACG
TAGTGTCCGCCGTGCATGCCGCCCGAGTGCTCCACCACGCCGTACAGCGCGTACAGCAGC
GAGGCCTGGCCGCGCACCTTGTCCATGGCGCAGAAGGGCGCCAGGTCCAGGACGGTCGGG
AAGTCCACGTGCTTCGACATCTTGCGGAACATGCATCGCGGCCCGATCTGGAACCGCTTG
AGGTGCAGGATGAGGACGGCGGGCGGGCTGGACACCAGGAACCGCTTCGTCGCGTTTGTG
TAGATCGTCTTCCCGCCCTTGCCGTTGACGCGCTCGGTGCACAGCTCGCAGCCGACCTTG
TTGTTGCCCGTGAGCAGCTCGAGCGCCGTGAACTGCGCGAGGCAGGAGTGCACGCTGCAC
TCGTCCTCGTCGCACACGTAGCGCGGGGAGGGGGGCGCGGGCCGGGGCTGCGGCGCAGGA
GGGGGAGGCTCCTCCAGGTACAGGTTGTCGAGTTGCTCGTTGAGTTCGTTGAGCGTCTTG
GTTTCGAGGAGAGAGTCGTAGCTGTTGTCGACGCTGTTCTCCAGCAGGTTGCGGCACCCC
TGGACGCTGATCCCCCGGGAAACGAGTTCGTTGGTGTACTCCGGTGCGAAGGATATTCTG
GAGGCGGGCCTCTCGTACTCCGGCTTGACGGGCGAGGGCTCGTCGTGGACGGTCTCGGTG
GAGTTGTGCTTGGTGGCCTCGGGGCTGGCGACTCCGGAATCAGGGTTGGACAGGTTCTCG
AGCGGCTCGTACTGGAGCGGGATGGCGACGGGGGGCCCGTCCTTGTCGGTGCGTTCCGGA
GTGTTGTCGGCCTTCTCCTTGTCGAGATGAACGGGGCTGGTGCGGATGGAGTCTGCGCTG
ATGACCTTCTCCGAGTTGTAGCCGGACTCCATGTGGTAGACGGCGAAGTTGGCGGCGGTG
TGCGCGAGCGCGGGGCCGGGCCGCGGCTGCTCCTCCAGGTTGTCCTCCACGTCGGCGTCG
GACTGCTCGGAGGAGGAGTTGCCGTCCTCCTTGGCGGGCCCGCTGGTGTCGGCGCCGCCC
TCGCCCGCGGCTCCTGCGGAAGAGGAAGGGATGTAGTGCACATGTACAGGAGAGCGCGGC
GGCCGCGGGTCCCGGCGCGGGGGTACCTTTGTTCTTCCGGGCTGCTTTCCGAGCGGCGAT
CCGTTCTTTCTTGAGCTGATGCTTCGAAGGCTTATTCTCTTCTTGAGTATTGTACGCATT
(1260 bp)

- SilkBase 1999-2023 -