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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1471 A_BomoFB_comp10331_c0_seq2
2590bp
 PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_16_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003713 F transcription coactivator activity
GO:0004197 F cysteine-type endopeptidase activity
GO:0004843 F thiol-dependent deubiquitinase
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008150 P biological_process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008270 F zinc ion binding
GO:0010468 P regulation of gene expression
GO:0016568 P chromatin organization
GO:0016578 P histone deubiquitination
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0035522 P monoubiquitinated histone H2A deubiquitination
GO:0036459 F thiol-dependent deubiquitinase
GO:0042393 F histone binding
GO:0043130 F ubiquitin binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045901 P positive regulation of translational elongation
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0051289 P protein homotetramerization
GO:0051301 P cell division
GO:0051726 P regulation of cell cycle
GO:0070537 P histone H2A K63-linked deubiquitination
FPKM:9.16 TPM:10.03
1472 A_BomoFB_comp10331_c0_seq3
1459bp
 PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_16_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003713 F transcription coactivator activity
GO:0004197 F cysteine-type endopeptidase activity
GO:0004843 F thiol-dependent deubiquitinase
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008150 P biological_process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008270 F zinc ion binding
GO:0010468 P regulation of gene expression
GO:0016568 P chromatin organization
GO:0016578 P histone deubiquitination
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0035522 P monoubiquitinated histone H2A deubiquitination
GO:0036459 F thiol-dependent deubiquitinase
GO:0042393 F histone binding
GO:0043130 F ubiquitin binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045901 P positive regulation of translational elongation
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0051289 P protein homotetramerization
GO:0051301 P cell division
GO:0051726 P regulation of cell cycle
GO:0070537 P histone H2A K63-linked deubiquitination
FPKM:2.43 TPM:2.67
1473 A_BomoFB_comp103324_c0_seq1
1502bp
 PREDICTED:_uncharacterized_protein_LOC101745524_isoform_X1_[Bombyx_mori]
FPKM:3.83 TPM:4.19
1474 A_BomoFB_comp10332_c0_seq1
1604bp
 PREDICTED:_uncharacterized_protein_LOC105841448_[Bombyx_mori]
FPKM:3.78 TPM:4.14
1475 A_BomoFB_comp10332_c0_seq2
269bp
 PREDICTED:_uncharacterized_protein_LOC105841448_[Bombyx_mori]
FPKM:0.11 TPM:0.12
1476 A_BomoFB_comp10332_c0_seq3
597bp
 PREDICTED:_uncharacterized_protein_LOC105841448_[Bombyx_mori]
FPKM:2.62 TPM:2.87
1477 A_BomoFB_comp103339_c0_seq1
1607bp
 PREDICTED:_phosphatidylinositol_glycan_anchor_biosynthesis_class_U_protein_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006506 P GPI anchor biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042765 C GPI-anchor transamidase complex
FPKM:1.94 TPM:2.13
1478 A_BomoFB_comp10333_c0_seq1
1220bp
 PREDICTED:_uncharacterized_protein_LOC105842478_[Bombyx_mori]
FPKM:1.94 TPM:2.13
1479 A_BomoFB_comp10333_c0_seq2
910bp
 endonuclease_and_reverse_transcriptase-like_protein_[Bombyx_mori]
FPKM:4.18 TPM:4.58
1480 A_BomoFB_comp10333_c0_seq3
978bp
 PREDICTED:_uncharacterized_protein_LOC105842478_[Bombyx_mori]
FPKM:4.91 TPM:5.38
1481 A_BomoFB_comp10333_c1_seq1
652bp
 hypothetical_protein_UR29_C0009G0009_[Candidatus_Woesebacteria_bacterium_GW2011_GWC2_33_12]
FPKM:1.04 TPM:1.14
1482 A_BomoFB_comp10334_c0_seq1
2206bp
 PREDICTED:_cytochrome_P450_CYP9A21_isoform_X2_[Bombyx_mori]
GO:0004497 F monooxygenase activity
GO:0005506 F iron ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 F heme binding
GO:0031090 C organelle membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
FPKM:9.79 TPM:10.72
1483 A_BomoFB_comp10334_c0_seq2
1802bp
 cytochrome_P450_9a20_[Bombyx_mori]
GO:0004497 F monooxygenase activity
GO:0005506 F iron ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 F heme binding
GO:0031090 C organelle membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
FPKM:44.59 TPM:48.85
1484 A_BomoFB_comp10334_c0_seq3
2246bp
 PREDICTED:_cytochrome_P450_CYP9A21_isoform_X2_[Bombyx_mori]
GO:0004497 F monooxygenase activity
GO:0005506 F iron ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 F heme binding
GO:0031090 C organelle membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
FPKM:9.09 TPM:9.96
1485 A_BomoFB_comp10334_c0_seq4
2196bp
 cytochrome_P450_9a20_[Bombyx_mori]
GO:0004497 F monooxygenase activity
GO:0005506 F iron ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 F heme binding
GO:0031090 C organelle membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
FPKM:0.06 TPM:0.06
1486 A_BomoFB_comp10334_c0_seq5
2064bp
 cytochrome_P450_9a20_[Bombyx_mori]
GO:0004497 F monooxygenase activity
GO:0005506 F iron ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 F heme binding
GO:0031090 C organelle membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
FPKM:0.73 TPM:0.80
1487 A_BomoFB_comp10334_c0_seq6
1852bp
 cytochrome_P450_9a20_[Bombyx_mori]
GO:0004497 F monooxygenase activity
GO:0005506 F iron ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 F heme binding
GO:0031090 C organelle membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
FPKM:0.81 TPM:0.89
1488 A_BomoFB_comp10334_c0_seq7
1710bp
 cytochrome_P450_9a20_[Bombyx_mori]
GO:0004497 F monooxygenase activity
GO:0005506 F iron ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 F heme binding
GO:0031090 C organelle membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
FPKM:27.61 TPM:30.25
1489 A_BomoFB_comp10334_c0_seq8
2156bp
 cytochrome_P450_9a20_[Bombyx_mori]
GO:0004497 F monooxygenase activity
GO:0005506 F iron ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 F heme binding
GO:0031090 C organelle membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
FPKM:0.05 TPM:0.05
1490 A_BomoFB_comp10334_c0_seq9
2104bp
 cytochrome_P450_9a20_[Bombyx_mori]
GO:0004497 F monooxygenase activity
GO:0005506 F iron ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 F heme binding
GO:0031090 C organelle membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
FPKM:1.26 TPM:1.38
1491 A_BomoFB_comp10335_c0_seq1
5616bp
 PREDICTED:_uncharacterized_protein_LOC105843014_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0003934 F GTP cyclohydrolase I activity
GO:0005525 F GTP binding
GO:0005737 C cytoplasm
GO:0006728 P pteridine biosynthetic process
GO:0006729 P tetrahydrobiopterin biosynthetic process
GO:0008152 P metabolic process
GO:0008270 F zinc ion binding
GO:0008363 P larval chitin-based cuticle development
GO:0009880 P embryonic pattern specification
GO:0016787 F hydrolase activity
GO:0035185 P preblastoderm mitotic cell cycle
GO:0035998 P 7,8-dihydroneopterin 3'-triphosphate biosynthetic process
GO:0043095 P regulation of GTP cyclohydrolase I activity
GO:0046654 P tetrahydrofolate biosynthetic process
GO:0046872 F metal ion binding
GO:0048067 P cuticle pigmentation
GO:0048072 P compound eye pigmentation
GO:0060308 F GTP cyclohydrolase I regulator activity
GO:2000274 P regulation of epithelial cell migration, open tracheal system
FPKM:0.56 TPM:0.62
1492 A_BomoFB_comp10335_c0_seq2
757bp
FPKM:1.42 TPM:1.55
1493 A_BomoFB_comp10335_c0_seq3
5756bp
 PREDICTED:_uncharacterized_protein_LOC105843014_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0003934 F GTP cyclohydrolase I activity
GO:0005525 F GTP binding
GO:0005737 C cytoplasm
GO:0006728 P pteridine biosynthetic process
GO:0006729 P tetrahydrobiopterin biosynthetic process
GO:0008152 P metabolic process
GO:0008270 F zinc ion binding
GO:0008363 P larval chitin-based cuticle development
GO:0009880 P embryonic pattern specification
GO:0016787 F hydrolase activity
GO:0035185 P preblastoderm mitotic cell cycle
GO:0035998 P 7,8-dihydroneopterin 3'-triphosphate biosynthetic process
GO:0043095 P regulation of GTP cyclohydrolase I activity
GO:0046654 P tetrahydrofolate biosynthetic process
GO:0046872 F metal ion binding
GO:0048067 P cuticle pigmentation
GO:0048072 P compound eye pigmentation
GO:0060308 F GTP cyclohydrolase I regulator activity
GO:2000274 P regulation of epithelial cell migration, open tracheal system
FPKM:9.15 TPM:10.02
1494 A_BomoFB_comp10336_c0_seq1
1158bp
 PREDICTED:_uncharacterized_protein_LOC101742687_isoform_X2_[Bombyx_mori]
FPKM:10.39 TPM:11.39
1495 A_BomoFB_comp10336_c0_seq2
746bp
 PREDICTED:_uncharacterized_protein_LOC101742687_isoform_X2_[Bombyx_mori]
FPKM:24.08 TPM:26.38
1496 A_BomoFB_comp10336_c1_seq1
462bp
FPKM:4.47 TPM:4.90
1497 A_BomoFB_comp10336_c1_seq2
957bp
FPKM:4.56 TPM:5.00
1498 A_BomoFB_comp10336_c1_seq3
800bp
FPKM:4.57 TPM:5.01
1499 A_BomoFB_comp10336_c1_seq4
671bp
FPKM:0.56 TPM:0.62
1500 A_BomoFB_comp10336_c1_seq5
443bp
FPKM:12.73 TPM:13.95
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