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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1081 A_BomoFB_comp1026_c0_seq1
281bp
 PREDICTED:_facilitated_trehalose_transporter_Tret1-2_homolog_isoform_X2_[Bombyx_mori]
FPKM:2.17 TPM:2.38
1082 A_BomoFB_comp10270_c0_seq1
2294bp
 PiggyBac_transposable_element-derived_protein_4_[Papilio_machaon]
FPKM:2.02 TPM:2.22
1083 A_BomoFB_comp10270_c0_seq2
343bp
 3-oxoacyl-[acyl-carrier-protein]_reductase_FabG_[Toxocara_canis]
FPKM:1.35 TPM:1.48
1084 A_BomoFB_comp10270_c0_seq3
2479bp
 PREDICTED:_piggyBac_transposable_element-derived_protein_4-like_isoform_X1_[Bombyx_mori]
FPKM:0.46 TPM:0.50
1085 A_BomoFB_comp10271_c0_seq1
1883bp
 PREDICTED:_adhesive_plaque_matrix_protein-like_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0008150 P biological_process
FPKM:51.25 TPM:56.16
1086 A_BomoFB_comp10271_c0_seq2
1928bp
 PREDICTED:_adhesive_plaque_matrix_protein-like_[Bombyx_mori]
GO:0005737 C cytoplasm
FPKM:15.96 TPM:17.49
1087 A_BomoFB_comp10271_c0_seq3
1826bp
 PREDICTED:_adhesive_plaque_matrix_protein-like_[Bombyx_mori]
GO:0005737 C cytoplasm
FPKM:18.05 TPM:19.78
1088 A_BomoFB_comp10271_c0_seq4
1915bp
 PREDICTED:_adhesive_plaque_matrix_protein-like_[Bombyx_mori]
GO:0005737 C cytoplasm
FPKM:15.81 TPM:17.32
1089 A_BomoFB_comp10271_c0_seq5
2115bp
 PREDICTED:_adhesive_plaque_matrix_protein-like_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0008150 P biological_process
FPKM:35.79 TPM:39.22
1090 A_BomoFB_comp10271_c0_seq6
2495bp
 PREDICTED:_adhesive_plaque_matrix_protein-like_[Bombyx_mori]
GO:0005737 C cytoplasm
FPKM:163.35 TPM:178.99
1091 A_BomoFB_comp10272_c0_seq1
1302bp
 receptor_for_activated_protein_kinase_C_RACK_1_isoform_1_[Bombyx_mori]
GO:0000398 P mRNA splicing, via spliceosome
GO:0005080 F protein kinase C binding
GO:0005737 C cytoplasm
GO:0005776 C autophagosome
GO:0005829 C cytosol
GO:0005875 C microtubule associated complex
GO:0007626 P locomotory behavior
GO:0009267 P cellular response to starvation
GO:0016243 P regulation of autophagosome size
GO:0018991 P oviposition
GO:0035220 P wing disc development
GO:0042335 P cuticle development
GO:0044829 P positive regulation by host of viral genome replication
GO:0045725 P positive regulation of glycogen biosynthetic process
GO:0046716 P muscle cell cellular homeostasis
GO:0048477 P oogenesis
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
GO:0075522 P IRES-dependent viral translational initiation
FPKM:731.65 TPM:801.68
1092 A_BomoFB_comp10273_c0_seq1
319bp
 reverse_transcriptase_[Bombyx_mori]
FPKM:2.38 TPM:2.61
1093 A_BomoFB_comp10273_c0_seq2
298bp
 reverse_transcriptase_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:16.32 TPM:17.89
1094 A_BomoFB_comp10274_c0_seq1
5829bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_isoform_X1_[Papilio_machaon]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:5.79 TPM:6.35
1095 A_BomoFB_comp102750_c0_seq1
510bp
 PREDICTED:_uncharacterized_protein_LOC105381048_[Plutella_xylostella]
GO:0000166 F nucleotide binding
GO:0000775 C chromosome, centromeric region
GO:0000793 C condensed chromosome
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006259 P DNA metabolic process
GO:0007049 P cell cycle
GO:0007126 P meiotic cell cycle
GO:0008022 F protein C-terminus binding
GO:0008283 P cell population proliferation
GO:0014070 P response to organic cyclic compound
GO:0016020 C membrane
GO:0030212 P hyaluronan metabolic process
GO:0031100 P animal organ regeneration
GO:0034605 P cellular response to heat
GO:0044822 F RNA binding
GO:0072574 P hepatocyte proliferation
GO:1990705 P cholangiocyte proliferation
FPKM:4.81 TPM:5.28
1096 A_BomoFB_comp1027512_c0_seq1
212bp
FPKM:1.40 TPM:1.54
1097 A_BomoFB_comp10275_c0_seq1
4006bp
 PREDICTED:_regulating_synaptic_membrane_exocytosis_protein_2_isoform_X5_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005886 C plasma membrane
GO:0006886 P intracellular protein transport
GO:0010628 P positive regulation of gene expression
GO:0016020 C membrane
GO:0017137 F small GTPase binding
GO:0017156 P calcium-ion regulated exocytosis
GO:0017157 P regulation of exocytosis
GO:0019933 P cAMP-mediated signaling
GO:0030054 C cell junction
GO:0030073 P insulin secretion
GO:0030154 P cell differentiation
GO:0042391 P regulation of membrane potential
GO:0042734 C presynaptic membrane
GO:0044325 F transmembrane transporter binding
GO:0045202 C synapse
GO:0046872 F metal ion binding
GO:0048786 C presynaptic active zone
GO:0048791 P calcium ion-regulated exocytosis of neurotransmitter
GO:0061669 P spontaneous neurotransmitter secretion
GO:0070062 C extracellular exosome
GO:0097151 P positive regulation of inhibitory postsynaptic potential
GO:1903861 P positive regulation of dendrite extension
GO:2000463 P positive regulation of excitatory postsynaptic potential
FPKM:0.65 TPM:0.71
1098 A_BomoFB_comp10275_c0_seq2
4211bp
 PREDICTED:_regulating_synaptic_membrane_exocytosis_protein_2_isoform_X1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005886 C plasma membrane
GO:0006886 P intracellular protein transport
GO:0010628 P positive regulation of gene expression
GO:0016020 C membrane
GO:0017137 F small GTPase binding
GO:0017156 P calcium-ion regulated exocytosis
GO:0017157 P regulation of exocytosis
GO:0019933 P cAMP-mediated signaling
GO:0030054 C cell junction
GO:0030073 P insulin secretion
GO:0030154 P cell differentiation
GO:0042391 P regulation of membrane potential
GO:0042734 C presynaptic membrane
GO:0044325 F transmembrane transporter binding
GO:0045202 C synapse
GO:0046872 F metal ion binding
GO:0048786 C presynaptic active zone
GO:0048791 P calcium ion-regulated exocytosis of neurotransmitter
GO:0061669 P spontaneous neurotransmitter secretion
GO:0070062 C extracellular exosome
GO:0097151 P positive regulation of inhibitory postsynaptic potential
GO:1903861 P positive regulation of dendrite extension
GO:2000463 P positive regulation of excitatory postsynaptic potential
FPKM:3.52 TPM:3.86
1099 A_BomoFB_comp10275_c0_seq3
4151bp
 PREDICTED:_regulating_synaptic_membrane_exocytosis_protein_2_isoform_X5_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005886 C plasma membrane
GO:0006886 P intracellular protein transport
GO:0010628 P positive regulation of gene expression
GO:0016020 C membrane
GO:0017137 F small GTPase binding
GO:0017156 P calcium-ion regulated exocytosis
GO:0017157 P regulation of exocytosis
GO:0019933 P cAMP-mediated signaling
GO:0030054 C cell junction
GO:0030073 P insulin secretion
GO:0030154 P cell differentiation
GO:0042391 P regulation of membrane potential
GO:0042734 C presynaptic membrane
GO:0044325 F transmembrane transporter binding
GO:0045202 C synapse
GO:0046872 F metal ion binding
GO:0048786 C presynaptic active zone
GO:0048791 P calcium ion-regulated exocytosis of neurotransmitter
GO:0061669 P spontaneous neurotransmitter secretion
GO:0070062 C extracellular exosome
GO:0097151 P positive regulation of inhibitory postsynaptic potential
GO:1903861 P positive regulation of dendrite extension
GO:2000463 P positive regulation of excitatory postsynaptic potential
FPKM:5.15 TPM:5.65
1100 A_BomoFB_comp10275_c0_seq4
4066bp
 PREDICTED:_regulating_synaptic_membrane_exocytosis_protein_2_isoform_X1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005886 C plasma membrane
GO:0006886 P intracellular protein transport
GO:0010628 P positive regulation of gene expression
GO:0016020 C membrane
GO:0017137 F small GTPase binding
GO:0017156 P calcium-ion regulated exocytosis
GO:0017157 P regulation of exocytosis
GO:0019933 P cAMP-mediated signaling
GO:0030054 C cell junction
GO:0030073 P insulin secretion
GO:0030154 P cell differentiation
GO:0042391 P regulation of membrane potential
GO:0042734 C presynaptic membrane
GO:0044325 F transmembrane transporter binding
GO:0045202 C synapse
GO:0046872 F metal ion binding
GO:0048786 C presynaptic active zone
GO:0048791 P calcium ion-regulated exocytosis of neurotransmitter
GO:0061669 P spontaneous neurotransmitter secretion
GO:0070062 C extracellular exosome
GO:0097151 P positive regulation of inhibitory postsynaptic potential
GO:1903861 P positive regulation of dendrite extension
GO:2000463 P positive regulation of excitatory postsynaptic potential
FPKM:0.48 TPM:0.52
1101 A_BomoFB_comp10275_c1_seq1
701bp
FPKM:0.73 TPM:0.80
1102 A_BomoFB_comp10276_c0_seq1
1092bp
FPKM:3.70 TPM:4.06
1103 A_BomoFB_comp10276_c0_seq2
973bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:2.82 TPM:3.09
1104 A_BomoFB_comp10276_c0_seq3
1745bp
 PREDICTED:_MRG/MORF4L-binding_protein_isoform_X1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0016568 P chromatin organization
GO:0016573 P histone acetylation
GO:0035267 C NuA4 histone acetyltransferase complex
GO:0040008 P regulation of growth
GO:0043189 C H4/H2A histone acetyltransferase complex
FPKM:0.70 TPM:0.77
1105 A_BomoFB_comp10276_c0_seq4
1757bp
 PREDICTED:_MRG/MORF4L-binding_protein_isoform_X1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0016568 P chromatin organization
GO:0016573 P histone acetylation
GO:0035267 C NuA4 histone acetyltransferase complex
GO:0040008 P regulation of growth
GO:0043189 C H4/H2A histone acetyltransferase complex
FPKM:0.00 TPM:0.00
1106 A_BomoFB_comp10276_c0_seq5
1719bp
 PREDICTED:_MRG/MORF4L-binding_protein_isoform_X1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0016568 P chromatin organization
GO:0016573 P histone acetylation
GO:0035267 C NuA4 histone acetyltransferase complex
GO:0040008 P regulation of growth
GO:0043189 C H4/H2A histone acetyltransferase complex
FPKM:4.01 TPM:4.40
1107 A_BomoFB_comp10276_c0_seq6
1731bp
 PREDICTED:_MRG/MORF4L-binding_protein_isoform_X1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0016568 P chromatin organization
GO:0016573 P histone acetylation
GO:0035267 C NuA4 histone acetyltransferase complex
GO:0040008 P regulation of growth
GO:0043189 C H4/H2A histone acetyltransferase complex
FPKM:0.92 TPM:1.01
1108 A_BomoFB_comp10276_c0_seq7
252bp
 hypothetical_protein_RR48_00002_[Papilio_machaon]
FPKM:7.45 TPM:8.16
1109 A_BomoFB_comp10277_c0_seq1
655bp
 PREDICTED:_uncharacterized_protein_LOC107072460_[Polistes_dominula]
FPKM:4.03 TPM:4.41
1110 A_BomoFB_comp10277_c0_seq2
299bp
FPKM:1.85 TPM:2.03
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