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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1021 A_BomoFB_comp10252_c0_seq2
4016bp
 PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_7-like_isoform_X5_[Bombyx_mori]
GO:0004197 F cysteine-type endopeptidase activity
GO:0004843 F thiol-dependent deubiquitinase
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006283 P transcription-coupled nucleotide-excision repair
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0007275 P multicellular organism development
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0010216 P maintenance of DNA methylation
GO:0016579 P protein deubiquitination
GO:0016605 C PML body
GO:0016787 F hydrolase activity
GO:0031647 P regulation of protein stability
GO:0036459 F thiol-dependent deubiquitinase
GO:0042803 F protein homodimerization activity
GO:0043065 P positive regulation of apoptotic process
GO:0051090 P regulation of DNA-binding transcription factor activity
FPKM:5.87 TPM:6.43
1022 A_BomoFB_comp10253_c0_seq1
918bp
 protein_CREG1_precursor_[Papilio_xuthus]
GO:0003714 F transcription corepressor activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005667 C transcription regulator complex
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0008134 F transcription factor binding
GO:0008283 P cell population proliferation
GO:0010181 F FMN binding
GO:0016491 F oxidoreductase activity
GO:0040008 P regulation of growth
GO:0055114 P obsolete oxidation-reduction process
GO:0070062 C extracellular exosome
GO:1903507 P negative regulation of nucleic acid-templated transcription
FPKM:581.90 TPM:637.60
1023 A_BomoFB_comp102540_c0_seq1
269bp
FPKM:1.84 TPM:2.01
1024 A_BomoFB_comp10254_c0_seq1
759bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:9.92 TPM:10.87
1025 A_BomoFB_comp10255_c0_seq1
545bp
 PREDICTED:_uncharacterized_protein_LOC105843021_[Bombyx_mori]
FPKM:7.54 TPM:8.26
1026 A_BomoFB_comp10255_c0_seq2
739bp
 PREDICTED:_uncharacterized_protein_LOC105841821_[Bombyx_mori]
FPKM:0.53 TPM:0.58
1027 A_BomoFB_comp10255_c0_seq3
1124bp
 PREDICTED:_uncharacterized_protein_LOC105843021_[Bombyx_mori]
FPKM:2.10 TPM:2.30
1028 A_BomoFB_comp10256_c0_seq1
3061bp
 PREDICTED:_ankyrin_repeat_domain-containing_protein_12_isoform_X3_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
FPKM:3.42 TPM:3.75
1029 A_BomoFB_comp10256_c0_seq2
3241bp
 PREDICTED:_ankyrin_repeat_domain-containing_protein_12_isoform_X2_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
FPKM:6.18 TPM:6.77
1030 A_BomoFB_comp10256_c0_seq3
2803bp
 PREDICTED:_ankyrin_repeat_domain-containing_protein_12_isoform_X3_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
FPKM:0.82 TPM:0.89
1031 A_BomoFB_comp10256_c0_seq4
2829bp
 PREDICTED:_ankyrin_repeat_domain-containing_protein_12_isoform_X2_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
FPKM:3.14 TPM:3.44
1032 A_BomoFB_comp10257_c0_seq1
780bp
 putative_pol-like_protein_[Danaus_plexippus]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:0.99 TPM:1.08
1033 A_BomoFB_comp10257_c0_seq2
1282bp
 putative_pol-like_protein_[Danaus_plexippus]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:1.05 TPM:1.15
1034 A_BomoFB_comp10257_c0_seq3
1385bp
 putative_pol-like_protein_[Danaus_plexippus]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:0.37 TPM:0.41
1035 A_BomoFB_comp10257_c0_seq4
1729bp
 putative_pol-like_protein_[Danaus_plexippus]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:4.97 TPM:5.45
1036 A_BomoFB_comp1025883_c0_seq1
216bp
 putative_reverse_transcriptase_[Operophtera_brumata]
FPKM:1.30 TPM:1.42
1037 A_BomoFB_comp10258_c0_seq1
1166bp
FPKM:6.57 TPM:7.20
1038 A_BomoFB_comp10259_c0_seq1
1743bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_[Amyelois_transitella]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:4.52 TPM:4.96
1039 A_BomoFB_comp10259_c0_seq2
1734bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_[Amyelois_transitella]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:1.77 TPM:1.94
1040 A_BomoFB_comp10259_c0_seq3
259bp
 PREDICTED:_muscarinic_acetylcholine_receptor_M3-like_[Strongylocentrotus_purpuratus]
FPKM:1.37 TPM:1.50
1041 A_BomoFB_comp10259_c0_seq4
551bp
 PREDICTED:_uncharacterized_protein_LOC105118166_[Populus_euphratica]
FPKM:1.70 TPM:1.87
1042 A_BomoFB_comp10259_c0_seq5
1018bp
 LDLR_chaperone_boca_precursor_[Papilio_xuthus]
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005788 C endoplasmic reticulum lumen
GO:0006612 P protein targeting to membrane
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0012505 C endomembrane system
GO:0016055 P Wnt signaling pathway
GO:0032799 P low-density lipoprotein receptor particle metabolic process
GO:0045177 C apical part of cell
GO:0048477 P oogenesis
GO:0048728 P proboscis development
FPKM:16.07 TPM:17.61
1043 A_BomoFB_comp10260_c0_seq1
1134bp
FPKM:0.92 TPM:1.01
1044 A_BomoFB_comp10260_c0_seq2
1120bp
FPKM:2.02 TPM:2.21
1045 A_BomoFB_comp10260_c1_seq1
1099bp
 PREDICTED:_protein_IWS1_homolog_isoform_X2_[Bombyx_mori]
FPKM:23.00 TPM:25.20
1046 A_BomoFB_comp10260_c1_seq2
1290bp
 PREDICTED:_protein_IWS1_homolog_isoform_X2_[Bombyx_mori]
FPKM:1.27 TPM:1.40
1047 A_BomoFB_comp102618_c0_seq1
972bp
 Cyclin-J_[Papilio_xuthus]
FPKM:3.51 TPM:3.85
1048 A_BomoFB_comp10261_c0_seq1
2480bp
 hypothetical_protein_KGM_09149_[Danaus_plexippus]
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
FPKM:3.00 TPM:3.29
1049 A_BomoFB_comp102626_c0_seq1
692bp
 PREDICTED:_mkk7_isoform_X4_[Bombyx_mori]
GO:0000165 P MAPK cascade
GO:0000166 F nucleotide binding
GO:0000187 P obsolete activation of MAPK activity
GO:0001736 P establishment of planar polarity
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004702 F obsolete signal transducer, downstream of receptor, with serine/threonine kinase activity
GO:0004708 F MAP kinase kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0005078 F MAP-kinase scaffold activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006468 P protein phosphorylation
GO:0007254 P JNK cascade
GO:0007257 P obsolete activation of JUN kinase activity
GO:0007275 P multicellular organism development
GO:0007298 P border follicle cell migration
GO:0007391 P dorsal closure
GO:0007395 P dorsal closure, spreading of leading edge cells
GO:0007411 P axon guidance
GO:0007561 P imaginal disc eversion
GO:0008340 P determination of adult lifespan
GO:0008545 F JUN kinase kinase activity
GO:0009408 P response to heat
GO:0010508 P positive regulation of autophagy
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0019901 F protein kinase binding
GO:0030032 P lamellipodium assembly
GO:0030381 P chorion-containing eggshell pattern formation
GO:0030424 C axon
GO:0030707 P ovarian follicle cell development
GO:0033500 P carbohydrate homeostasis
GO:0034769 P basement membrane disassembly
GO:0035006 P melanization defense response
GO:0042060 P wound healing
GO:0043507 P positive regulation of JUN kinase activity
GO:0043652 P engulfment of apoptotic cell
GO:0045610 P regulation of hemocyte differentiation
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046330 P positive regulation of JNK cascade
GO:0046528 P imaginal disc fusion
GO:0046529 P imaginal disc fusion, thorax closure
GO:0046843 P dorsal appendage formation
GO:0046844 P chorion micropyle formation
GO:0046847 P filopodium assembly
GO:0048666 P neuron development
GO:0048675 P axon extension
GO:0051017 P actin filament bundle assembly
GO:0070328 P triglyceride homeostasis
GO:0071243 P cellular response to arsenic-containing substance
GO:0071276 P cellular response to cadmium ion
FPKM:5.12 TPM:5.61
1050 A_BomoFB_comp10263_c0_seq1
1815bp
 Gag-pol_polyprotein_[Operophtera_brumata]
FPKM:6.60 TPM:7.24
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