SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp10252_c0_seq2
Scaffold_idBomo_Chr17
NCBI non-redundant
(nr)		PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_7-like_isoform_X5_[Bombyx_mori]
Ontology
GO:0004197 F cysteine-type endopeptidase activity
GO:0004843 F thiol-dependent deubiquitinase
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006283 P transcription-coupled nucleotide-excision repair
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0007275 P multicellular organism development
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0010216 P maintenance of DNA methylation
GO:0016579 P protein deubiquitination
GO:0016605 C PML body
GO:0016787 F hydrolase activity
GO:0031647 P regulation of protein stability
GO:0036459 F thiol-dependent deubiquitinase
GO:0042803 F protein homodimerization activity
GO:0043065 P positive regulation of apoptotic process
GO:0051090 P regulation of DNA-binding transcription factor activity
Transcript
Level		FPKM:5.87 TPM:6.43
ORF EntryO_BomoFB12617_complete:A_BomoFB_comp10252_c0_seq2
Sequence
(Nucleotide)
GCTGTGAGCTCGTCCACCCGTCTATGCAATCAAAAATAAAAAGTGTTTCACAAAATTACA
GCGCGTACTCGTTTCAGCCGCGTTCATAATGATCCTGGTCGCTTTACAAGTGAATATGGG
CGGTGCCGTGTCCCGGGCTGTGAGCGGAGTAGGTGCGGCGTTACGGCGGGGAGACGCGGC
GCGCGGCGACCGGCTCAGTTGTATATTTTGATGGCCTTCTCCAAGTAGTTGACGCGGGAT
CGCTTCGGCGTCTTGTTGATGTGCTCGAGCCCGAACCAGGGCCGCGCCGTTGCGTTCGTA
TTACTACTTAGTCTGAAATCGTTGATATTCACTGTCGCTCCTTCGCTTATGTAATTAGGT
CTGCCGTTTGTCACTACAGCAAAGTTGTACTTTTCCCATTCTTTGTCGGGTATGTCGAGT
TTCTTCTGTAGGCGATCTTTGACAGCTTCGAACGGTTCGTTGTGTTTGAAACGCGCGTAA
AACGGAATTCCGAACGTCGCGTATACTTGCTTGTAGAAATGCGCACACGGAACCAGCATC
TCATCCTCTTGTAAATTCAGTTCGTCTCTAGGTATCTCCTCTATTCTGTAGAGTCTGGGC
GGCGATATGGTGACCTGGTCGAGTGTGAGCTCGGGGTCCGGACCCGGTAGCACTTTGTGA
CACGACACCTCCACGATCCTTAGCCTGCCTGAGCCCTCGGTTGACATCTCGACTACTTTA
GCTGCCTCTTCTAAAATGTCCGACACTTTACCACCTTTATTTGGATACAAAATTAATTCT
TTATCCTCTTTGTAATTTGGACCAACCCATAGACATTTGAATTGCTTCTTGTTGTCCAAT
TCGTTTACTTTAATAGATAATATCTGATAGAATAATTTCTTAGGGCATTTTGGTTTGCAG
TACACTAATAAGTCCTTAAGTATTCCGTCGTATGAGTATCTCAAAGGTAGTCCTGGGGTG
TCCTTGTAGTTTTGACACTTAAAGAACTGTATTAAGTAAGGGTCCACGTTGAGCCTCTGG
CCGACCGCCCGCGCCATCTGATCATAACGCATTTGCATCGATAGCTCCATTGTGAATCCC
GGATCATTGGGCACCGTTTTATCGACGAACTGCACCTCGACCTTGTAGAAGATGTACTTG
AAGTAGTCCTGGCAGGTGGGCAGCTCCAGCTCGTCGTGTCGGTTGTCGGCACGTTCGAAC
ACAATGATGTCGCCGTCCATCAGCTCGTCCAATACCTTTTCTAGAGGTTCGTTGTAATTA
CTGATTTTTTCAACAAAGTCTGGTTTGATTTCTTCATACAGAACTAGTGGAGTGTCTGGT
GGGAATCCTGCACGTTGATTGAGTATAGGTAGAAGATCGGCAGGTTTGCTTGCGATGGGC
AAATAATGGTGTCCGCAGTAGTGTATGCGCTTCTGTTTAGGATCATAATACTTAAAAAAC
AGGACCACGTCGTTCTTCTTATCGAACCAAGGCAATGATGTGAGACCAGAATCTGGAGGC
AGCATCTCGAGGAATATGTTCCATGGGTTCATGTTCTCAGAAACGTCAGCTACAGTCTTG
AGTTGATCGTTAAAAATGTCTAGGCAGGTCGGTCTGCATGTCTGATTAGAGCGTGCGCTA
AATGGCCAGGGTCGGAGCTGCTGCAGTGGATACTTAAAGTTCTCTGACAATATCTCCATG
AGTTCAGAGACGGTGGCCTGCTTCCTGACGCGGAACACGCGGTAGTGCGCGCGCTCCGGG
TCGTACAGATCGTTCCCTTGATGACCGTCGAAAGCTTCCTCCAATACTACATTCACGTTC
ATATACAGGTGGGCTTCGTTCCGCTCTTTGCGACGAATGGTTTCGATTCTCTTCTCTTCA
GCTAATCTCTCACTCAACTCAGTAGGTATGTCTGCTTGTGTTACTTCTTGTAGAACAGTC
TTCAACTGTGAATCCCTGATATAAACCAACATATAGGCGTTAGTGCAGTGGCGAACGGTC
AACGTCATGTCCTCGTCGTGACCGCCGTAGTTGTATTCGATGGCCTCCTGTTTCGTGCAC
CGGGACACCACGTCGTCGTCGAACTTACACCACTTTCCGTCACCTTTCGGATTGATAAAG
ACCACATAATGCCCCCCGTGGTTGTCTCCCGAGTGAACTAATACCGCATGGAGGGTGTAG
TCAGCCGGTGTTTCTGGTTTCTCCTGTAGATATGCATCTAAATTGATACGTTCGTAGAAT
TCAAATCTGTCATTAAACTTGACCGAACTGTCGGTAATGGGATCGTATTGGAATCTCATC
AAGTGTAAATGTAACACGGGCGGGAACGTGGCAAATATGACGCCTTTCTCGGCTTCCTGG
AGACCGTGCTCGCCAGCGTCGTACTTATTCTCGCCGTCTAGCGTTTCTGTGCTTATGTAA
TCTTTGAACGATTCGTAGATATTTTTCTTCCCTTTTATATTGAGTTGGATATCGTAGAAT
GTTTCCACTCGGGTACTTGAAACGTTAACGTTCTTACACTTAATGTATGATGTCATCTTG
CCCTCGAACAGTCGAGGAACCGTGCCCTCCACGCATGTGCCCTTCATTTTACTTTCTAAT
TTATCCAATAAAACCCTAAGGAACTCTTGTACGTCGTGTTGCATGAAAGAATCAAGGGTT
TCCCAACCAAAGCTCTTGGTCAACTTCTTTGTACCAACTGGTTTATCACAGAACTGTAAC
TCGTAGAATACTCTTTGCAAAGCCAAAGCCACCGATCTAGTACTATCGTCCGATTCTGTA
GGCATCTTGTACACAGCTTTGCGGAGTTGATTCGTGAAATAAAGTGTTTGAAGTAACGAG
TTCATATAACAAGTTGCACCTTGATTCTTCAGACCAACATATCCTGTATGCTTCTTAGAA
TCCCAAGATACGCCGTGGGGTGCTTCGGCGGTGACGTGAACTTCCAGAGTGATCGCGTCG
TCTTTAATGTAGCCCTTCTCGGGGTCTAACACGTCGTTCCACGTCATGAAGTGAGAAAAG
CCCCAGTCGTTTTCTTTGCTGTAAAATAAATGTTGAATTTTCCTTAGGAAAGGTTCGGTG
TCCGGCTTGTGGGATATGAGTCTCAGTTCCGCCATCGCATAACAAGACCAGCTGGATGAT
TCACTTTCCCCGTTGCACTGTAGGAAGAAGCCCAGAGACTTTTGCTGTTGCCGATCGGGC
GAAGGCGCTTGCCGCGGCATAACCATTATCTTCCACGGCAGATTGCGCACGTAGCACGGC
GGCGACAGCATCGAGTCTTTCAAATTCTTAAAGTTGTGGACCGTGAATCGGAACGTTGCC
TCTGAACGCGCTTCGTCGTCTTCCATTTCAGCGTCAAGACAGGCGAGGGGCATCTCAGCT
GAGGCAGTCTCCTGTGTCTTCATAACATCAGCCATGACAACCTCACCATTAGGACCCTTC
ATCATTTCTTCATTCCAGGTTTTTTCAGTGGTAATTGTTTCAACGTCCTGAGTCTCCATC
TCCACGACCTGGTTAACATTGGAGTCGTGCTGCTGCCTGTCAGGTGCAGGCGTGTGATTC
ATGTTAGCCGGGCGCGCCACGGGGGACTTTCGCCCAAAGCTCTTCGATATTTCCTTTAAA
GCCAAGGGATTACTCCCTTTACACTTGCCGAAAATTCGTTGAACGAATTTCAACGAACCT
TTCTCATCGACGCGATTACCCTGGGCGTTAGGGATTTTGTTTTTCTTCGAAGGTTGGGAG
TTAATTTTCAAAGAATGTTTACTAGCGGCGCGGCCGATGTCTGCAAATTTCAATACAAGG
GCCGACAACGAATGAGTACGCTAATAGCACATTCCTAATCCTACAATCATTGCCAGAATC
GCTTTGTCACTACGAAGGATGGTGGCAGGCGAATATATTATAATTTAGCCGGGTACAGTC
GTATAAACGCGAAAATAAACAAAATGGTGGATGTTAATTTAATTTCTGACTTCGGATGTA
TGGCCCGGTTTGATCGACGAATGCACCATTTTATCATTCTTTCACATTTGCCCACA
(4016 bp)

- SilkBase 1999-2023 -