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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
7141 A_BomaMG_comp16582_c0_seq1
1053bp
hypothetical_protein_[Streptomyces_sp._AS58]
FPKM:2.14 TPM:1.98
7142 A_BomaMG_comp16583_c0_seq1
723bp
PREDICTED:_uncharacterized_protein_LOC106100155_[Papilio_polytes]
FPKM:1.75 TPM:1.62
7143 A_BomaMG_comp16583_c1_seq1
602bp
PREDICTED:_uncharacterized_protein_LOC106100155_[Papilio_polytes]
FPKM:1.21 TPM:1.12
7144 A_BomaMG_comp16584_c0_seq1
332bp
FPKM:0.90 TPM:0.83
7145 A_BomaMG_comp16584_c1_seq1
323bp
FPKM:1.19 TPM:1.10
7146 A_BomaMG_comp16586_c0_seq1
497bp
FPKM:1.93 TPM:1.79
7147 A_BomaMG_comp16586_c1_seq1
509bp
FPKM:2.07 TPM:1.92
7148 A_BomaMG_comp16586_c2_seq1
257bp
6-phosphofructo-2-kinase_family_protein,_expressed_[Oryza_sativa_Japonica_Group]
FPKM:2.57 TPM:2.38
7149 A_BomaMG_comp16588_c0_seq1
479bp
PREDICTED:_signal-induced_proliferation-associated_1-like_protein_2_[Bombyx_mori]
FPKM:2.05 TPM:1.90
7150 A_BomaMG_comp16589_c0_seq1
414bp
FPKM:1.17 TPM:1.08
7151 A_BomaMG_comp16589_c1_seq1
355bp
putative_uncharacterized_protein_[Clostridium_sp._CAG:413]
FPKM:0.78 TPM:0.72
7152 A_BomaMG_comp1658_c0_seq1
289bp
hypothetical_protein_AWW68_03205_[Roseivirga_spongicola]
FPKM:1.24 TPM:1.15
7153 A_BomaMG_comp16590_c0_seq1
435bp
hypothetical_protein_KGM_20501_[Danaus_plexippus]
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0030529 C ribonucleoprotein complex
GO:0044822 F RNA binding
FPKM:11.91 TPM:11.03
7154 A_BomaMG_comp16590_c0_seq2
358bp
hypothetical_protein_KGM_20501_[Danaus_plexippus]
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0030529 C ribonucleoprotein complex
GO:0044822 F RNA binding
FPKM:4.97 TPM:4.60
7155 A_BomaMG_comp16591_c0_seq1
1599bp
PREDICTED:_exocyst_complex_component_3_[Bombyx_mori]
GO:0000145 C exocyst
GO:0000149 F SNARE binding
GO:0005737 C cytoplasm
GO:0005915 C zonula adherens
GO:0006810 P transport
GO:0006887 P exocytosis
GO:0007009 P plasma membrane organization
GO:0007269 P neurotransmitter secretion
GO:0007298 P border follicle cell migration
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016028 C rhabdomere
GO:0016080 P synaptic vesicle targeting
GO:0016081 P synaptic vesicle docking
GO:0016192 P vesicle-mediated transport
GO:0030707 P ovarian follicle cell development
GO:0032456 P endocytic recycling
GO:0043001 P Golgi to plasma membrane protein transport
GO:0045313 P rhabdomere membrane biogenesis
GO:0072659 P protein localization to plasma membrane
GO:0072697 P protein localization to cell cortex
GO:0098793 C presynapse
FPKM:10.88 TPM:10.08
7156 A_BomaMG_comp16593_c0_seq1
628bp
PREDICTED:_histone_deacetylase_11_[Papilio_xuthus]
GO:0000118 C histone deacetylase complex
GO:0004407 F histone deacetylase activity
GO:0005634 C nucleus
GO:0005886 C plasma membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008134 F transcription factor binding
GO:0014003 P oligodendrocyte development
GO:0016568 P chromatin organization
GO:0016575 P histone deacetylation
GO:0016787 F hydrolase activity
GO:0032041 F NAD-dependent histone deacetylase activity (H3-K14 specific)
GO:0070062 C extracellular exosome
GO:0070932 P histone H3 deacetylation
FPKM:0.76 TPM:0.70
7157 A_BomaMG_comp16594_c0_seq1
208bp
putative_zinc_finger_protein_84_[Danaus_plexippus]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000792 C heterochromatin
GO:0001085 F RNA polymerase II-specific DNA-binding transcription factor binding
GO:0001105 F transcription coactivator activity
GO:0001158 F cis-regulatory region sequence-specific DNA binding
GO:0001657 P ureteric bud development
GO:0001658 P branching involved in ureteric bud morphogenesis
GO:0001822 P kidney development
GO:0001843 P neural tube closure
GO:0003281 P ventricular septum development
GO:0003337 P mesenchymal to epithelial transition involved in metanephros morphogenesis
GO:0003340 P negative regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0004407 F histone deacetylase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007507 P heart development
GO:0008013 F beta-catenin binding
GO:0010369 C chromocenter
GO:0016575 P histone deacetylation
GO:0016581 C NuRD complex
GO:0021553 P olfactory nerve development
GO:0021772 P olfactory bulb development
GO:0021889 P olfactory bulb interneuron differentiation
GO:0021915 P neural tube development
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0031129 P inductive cell-cell signaling
GO:0035136 P forelimb morphogenesis
GO:0035137 P hindlimb morphogenesis
GO:0042473 P outer ear morphogenesis
GO:0042733 P embryonic digit morphogenesis
GO:0045666 P positive regulation of neuron differentiation
GO:0045879 P negative regulation of smoothened signaling pathway
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0048566 P embryonic digestive tract development
GO:0060173 P limb development
GO:0061034 P olfactory bulb mitral cell layer development
GO:0072073 P kidney epithelium development
GO:0072092 P ureteric bud invasion
GO:0072309 P mesenchymal stem cell maintenance involved in metanephric nephron morphogenesis
GO:0090190 P positive regulation of branching involved in ureteric bud morphogenesis
GO:2000177 P regulation of neural precursor cell proliferation
GO:2000381 P negative regulation of mesoderm development
GO:2000384 P negative regulation of ectoderm development
FPKM:1.82 TPM:1.68
7158 A_BomaMG_comp16594_c1_seq1
323bp
PREDICTED:_zinc_finger_protein_431-like_[Papilio_xuthus]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
FPKM:1.19 TPM:1.10
7159 A_BomaMG_comp16595_c0_seq1
779bp
PREDICTED:_zinc_finger_protein_585B-like_isoform_X6_[Bombyx_mori]
FPKM:0.96 TPM:0.89
7160 A_BomaMG_comp16596_c0_seq1
1570bp
will_die_slowly_[Danaus_plexippus]
GO:0004402 F histone acetyltransferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005671 C obsolete Ada2/Gcn5/Ada3 transcription activator complex
GO:0005875 C microtubule associated complex
GO:0006338 P chromatin remodeling
GO:0007095 P mitotic G2 DNA damage checkpoint signaling
GO:0016573 P histone acetylation
GO:0022008 P neurogenesis
GO:0032436 P positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0044545 C NSL complex
GO:0044665 C MLL1/2 complex
GO:0044666 C MLL3/4 complex
GO:0048188 C Set1C/COMPASS complex
GO:0051568 P histone H3-K4 methylation
FPKM:10.57 TPM:9.79
7161 A_BomaMG_comp16597_c0_seq1
1517bp
FPKM:8.41 TPM:7.79
7162 A_BomaMG_comp16598_c0_seq1
204bp
Mitogen-activated_protein_kinase_kinase_kinase_kinase_3_[Zootermopsis_nevadensis]
FPKM:3.95 TPM:3.66
7163 A_BomaMG_comp165990_c0_seq1
606bp
FPKM:2.16 TPM:2.00
7164 A_BomaMG_comp16599_c0_seq1
212bp
PREDICTED:_period_circadian_protein_isoform_X3_[Cimex_lectularius]
FPKM:2.52 TPM:2.33
7165 A_BomaMG_comp16599_c1_seq1
235bp
FPKM:2.28 TPM:2.11
7166 A_BomaMG_comp1659_c0_seq1
262bp
PREDICTED:_WD_repeat_and_FYVE_domain-containing_protein_3_[Bombyx_mori]
GO:0003831 F beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity
GO:0005543 F phospholipid binding
GO:0005545 F 1-phosphatidylinositol binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005737 C cytoplasm
GO:0005776 C autophagosome
GO:0006914 P autophagy
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0016234 C inclusion body
GO:0016239 P positive regulation of macroautophagy
GO:0016605 C PML body
GO:0019898 C extrinsic component of membrane
GO:0031965 C nuclear membrane
GO:0034274 C Atg12-Atg5-Atg16 complex
GO:0035973 P aggrephagy
GO:0046872 F metal ion binding
GO:0097635 C extrinsic component of autophagosome membrane
FPKM:1.21 TPM:1.12
7167 A_BomaMG_comp1659_c1_seq1
292bp
PREDICTED:_WD_repeat_and_FYVE_domain-containing_protein_3_[Bombyx_mori]
GO:0003831 F beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity
GO:0005543 F phospholipid binding
GO:0005545 F 1-phosphatidylinositol binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005737 C cytoplasm
GO:0005776 C autophagosome
GO:0006914 P autophagy
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0016234 C inclusion body
GO:0016239 P positive regulation of macroautophagy
GO:0016605 C PML body
GO:0019898 C extrinsic component of membrane
GO:0031965 C nuclear membrane
GO:0034274 C Atg12-Atg5-Atg16 complex
GO:0035973 P aggrephagy
GO:0046872 F metal ion binding
GO:0097635 C extrinsic component of autophagosome membrane
FPKM:1.21 TPM:1.12
7168 A_BomaMG_comp165_c0_seq1
329bp
PREDICTED:_ken_and_barbie_protein_isoform_X2_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
FPKM:0.69 TPM:0.64
7169 A_BomaMG_comp16600_c0_seq1
522bp
PREDICTED:_uncharacterized_protein_LOC106131821_[Amyelois_transitella]
FPKM:1.19 TPM:1.11
7170 A_BomaMG_comp16602_c0_seq1
496bp
PREDICTED:_solute_carrier_family_12_member_6_isoform_X2_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006813 P potassium ion transport
GO:0007268 P chemical synaptic transmission
GO:0010107 P potassium ion import across plasma membrane
GO:0015079 F potassium ion transmembrane transporter activity
GO:0015293 F symporter activity
GO:0015377 F cation:chloride symporter activity
GO:0015379 F potassium:chloride symporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016323 C basolateral plasma membrane
GO:0016324 C apical plasma membrane
GO:0019901 F protein kinase binding
GO:0022820 F potassium:chloride symporter activity
GO:0030424 C axon
GO:0035826 P obsolete rubidium ion transport
GO:0035827 F obsolete rubidium ion transmembrane transporter activity
GO:0055085 P transmembrane transport
GO:0071476 P cellular hypotonic response
GO:0071477 P cellular hypotonic salinity response
GO:1902476 P chloride transmembrane transport
FPKM:1.40 TPM:1.30
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