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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
7171 A_BomaMG_comp16602_c1_seq1
576bp
PREDICTED:_solute_carrier_family_12_member_6_isoform_X3_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005765 C lysosomal membrane
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006813 P potassium ion transport
GO:0006821 P chloride transport
GO:0006884 P cell volume homeostasis
GO:0007268 P chemical synaptic transmission
GO:0015293 F symporter activity
GO:0015377 F cation:chloride symporter activity
GO:0015379 F potassium:chloride symporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019901 F protein kinase binding
GO:0022820 F potassium:chloride symporter activity
GO:0055085 P transmembrane transport
GO:0071805 P potassium ion transmembrane transport
GO:1902476 P chloride transmembrane transport
FPKM:1.46 TPM:1.35
7172 A_BomaMG_comp16604_c0_seq1
1361bp
adenosine_deaminase_related_growth_factor_precursor_[Bombyx_mori]
GO:0004000 F adenosine deaminase activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0006154 P adenosine catabolic process
GO:0008201 F heparin binding
GO:0008270 F zinc ion binding
GO:0016787 F hydrolase activity
GO:0019239 F deaminase activity
GO:0031685 F adenosine receptor binding
GO:0043394 F proteoglycan binding
GO:0046872 F metal ion binding
FPKM:1.66 TPM:1.54
7173 A_BomaMG_comp16604_c1_seq1
1749bp
PREDICTED:_adenosine_deaminase_CECR1-like_[Plutella_xylostella]
GO:0004000 F adenosine deaminase activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0019239 F deaminase activity
GO:0046872 F metal ion binding
FPKM:1.99 TPM:1.84
7174 A_BomaMG_comp16605_c0_seq1
2194bp
PREDICTED:_uncharacterized_protein_LOC101744580_[Bombyx_mori]
GO:0000182 F rDNA binding
GO:0000723 P telomere maintenance
GO:0000775 C chromosome, centromeric region
GO:0000780 C condensed chromosome, centromeric region
GO:0000781 C chromosome, telomeric region
GO:0000791 C euchromatin
GO:0000792 C heterochromatin
GO:0000793 C condensed chromosome
GO:0003682 F chromatin binding
GO:0003696 F satellite DNA binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0005701 C polytene chromosome chromocenter
GO:0005703 C polytene chromosome puff
GO:0005704 C polytene chromosome band
GO:0005720 C heterochromatin
GO:0005721 C pericentric heterochromatin
GO:0006342 P heterochromatin assembly
GO:0006343 P heterochromatin assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007067 P mitotic cell cycle
GO:0016458 P obsolete gene silencing
GO:0016568 P chromatin organization
GO:0022008 P neurogenesis
GO:0030702 P pericentric heterochromatin assembly
GO:0031060 P regulation of histone methylation
GO:0031507 P heterochromatin assembly
GO:0033697 P obsolete positive regulation of extent of heterochromatin assembly
GO:0034773 P histone H4-K20 trimethylation
GO:0035012 C obsolete polytene chromosome, telomeric region
GO:0035064 F methylated histone binding
GO:0042393 F histone binding
GO:0042981 P regulation of apoptotic process
GO:0044026 P DNA hypermethylation
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0051276 P chromosome organization
GO:0090309 P positive regulation of DNA methylation-dependent heterochromatin assembly
GO:1900111 P positive regulation of histone H3-K9 dimethylation
FPKM:0.50 TPM:0.47
7175 A_BomaMG_comp16605_c0_seq2
1935bp
PREDICTED:_uncharacterized_protein_LOC101744580_[Bombyx_mori]
GO:0000182 F rDNA binding
GO:0000723 P telomere maintenance
GO:0000775 C chromosome, centromeric region
GO:0000780 C condensed chromosome, centromeric region
GO:0000781 C chromosome, telomeric region
GO:0000791 C euchromatin
GO:0000792 C heterochromatin
GO:0000793 C condensed chromosome
GO:0003682 F chromatin binding
GO:0003696 F satellite DNA binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0005701 C polytene chromosome chromocenter
GO:0005703 C polytene chromosome puff
GO:0005704 C polytene chromosome band
GO:0005720 C heterochromatin
GO:0005721 C pericentric heterochromatin
GO:0006342 P heterochromatin assembly
GO:0006343 P heterochromatin assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007067 P mitotic cell cycle
GO:0016458 P obsolete gene silencing
GO:0016568 P chromatin organization
GO:0022008 P neurogenesis
GO:0030702 P pericentric heterochromatin assembly
GO:0031060 P regulation of histone methylation
GO:0031507 P heterochromatin assembly
GO:0033697 P obsolete positive regulation of extent of heterochromatin assembly
GO:0034773 P histone H4-K20 trimethylation
GO:0035012 C obsolete polytene chromosome, telomeric region
GO:0035064 F methylated histone binding
GO:0042393 F histone binding
GO:0042981 P regulation of apoptotic process
GO:0044026 P DNA hypermethylation
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0051276 P chromosome organization
GO:0090309 P positive regulation of DNA methylation-dependent heterochromatin assembly
GO:1900111 P positive regulation of histone H3-K9 dimethylation
FPKM:2.97 TPM:2.75
7176 A_BomaMG_comp16605_c0_seq3
1965bp
PREDICTED:_uncharacterized_protein_LOC101744580_[Bombyx_mori]
GO:0000182 F rDNA binding
GO:0000723 P telomere maintenance
GO:0000775 C chromosome, centromeric region
GO:0000780 C condensed chromosome, centromeric region
GO:0000781 C chromosome, telomeric region
GO:0000791 C euchromatin
GO:0000792 C heterochromatin
GO:0000793 C condensed chromosome
GO:0003682 F chromatin binding
GO:0003696 F satellite DNA binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0005701 C polytene chromosome chromocenter
GO:0005703 C polytene chromosome puff
GO:0005704 C polytene chromosome band
GO:0005720 C heterochromatin
GO:0005721 C pericentric heterochromatin
GO:0006342 P heterochromatin assembly
GO:0006343 P heterochromatin assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007067 P mitotic cell cycle
GO:0016458 P obsolete gene silencing
GO:0016568 P chromatin organization
GO:0022008 P neurogenesis
GO:0030702 P pericentric heterochromatin assembly
GO:0031060 P regulation of histone methylation
GO:0031507 P heterochromatin assembly
GO:0033697 P obsolete positive regulation of extent of heterochromatin assembly
GO:0034773 P histone H4-K20 trimethylation
GO:0035012 C obsolete polytene chromosome, telomeric region
GO:0035064 F methylated histone binding
GO:0042393 F histone binding
GO:0042981 P regulation of apoptotic process
GO:0044026 P DNA hypermethylation
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0051276 P chromosome organization
GO:0090309 P positive regulation of DNA methylation-dependent heterochromatin assembly
GO:1900111 P positive regulation of histone H3-K9 dimethylation
FPKM:4.65 TPM:4.31
7177 A_BomaMG_comp16605_c0_seq4
2164bp
PREDICTED:_uncharacterized_protein_LOC101744580_[Bombyx_mori]
GO:0000182 F rDNA binding
GO:0000723 P telomere maintenance
GO:0000775 C chromosome, centromeric region
GO:0000780 C condensed chromosome, centromeric region
GO:0000781 C chromosome, telomeric region
GO:0000791 C euchromatin
GO:0000792 C heterochromatin
GO:0000793 C condensed chromosome
GO:0003682 F chromatin binding
GO:0003696 F satellite DNA binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0005701 C polytene chromosome chromocenter
GO:0005703 C polytene chromosome puff
GO:0005704 C polytene chromosome band
GO:0005720 C heterochromatin
GO:0005721 C pericentric heterochromatin
GO:0006342 P heterochromatin assembly
GO:0006343 P heterochromatin assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007067 P mitotic cell cycle
GO:0016458 P obsolete gene silencing
GO:0016568 P chromatin organization
GO:0022008 P neurogenesis
GO:0030702 P pericentric heterochromatin assembly
GO:0031060 P regulation of histone methylation
GO:0031507 P heterochromatin assembly
GO:0033697 P obsolete positive regulation of extent of heterochromatin assembly
GO:0034773 P histone H4-K20 trimethylation
GO:0035012 C obsolete polytene chromosome, telomeric region
GO:0035064 F methylated histone binding
GO:0042393 F histone binding
GO:0042981 P regulation of apoptotic process
GO:0044026 P DNA hypermethylation
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0051276 P chromosome organization
GO:0090309 P positive regulation of DNA methylation-dependent heterochromatin assembly
GO:1900111 P positive regulation of histone H3-K9 dimethylation
FPKM:0.30 TPM:0.28
7178 A_BomaMG_comp16606_c0_seq1
593bp
PREDICTED:_ras-associated_and_pleckstrin_homology_domains-containing_protein_1_isoform_X2_[Bombyx_mori]
FPKM:5.20 TPM:4.81
7179 A_BomaMG_comp16606_c0_seq2
512bp
PREDICTED:_ras-associated_and_pleckstrin_homology_domains-containing_protein_1_isoform_X2_[Bombyx_mori]
FPKM:6.55 TPM:6.07
7180 A_BomaMG_comp16607_c0_seq1
233bp
hypothetical_protein_[Sphingomonas_sp._Root241]
FPKM:1.76 TPM:1.63
7181 A_BomaMG_comp16608_c0_seq1
303bp
simila_to_CG17386,_partial_[Papilio_polytes]
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006396 P RNA processing
GO:0006417 P regulation of translation
GO:0030529 C ribonucleoprotein complex
FPKM:2.21 TPM:2.05
7182 A_BomaMG_comp16608_c1_seq1
204bp
simila_to_CG17386,_partial_[Papilio_polytes]
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006396 P RNA processing
GO:0006417 P regulation of translation
GO:0030529 C ribonucleoprotein complex
FPKM:0.99 TPM:0.91
7183 A_BomaMG_comp16609_c0_seq1
862bp
FPKM:2.34 TPM:2.17
7184 A_BomaMG_comp1660_c0_seq1
242bp
amino_acid_decarboxylase_[Mesorhizobium_sp._Root172]
FPKM:1.55 TPM:1.43
7185 A_BomaMG_comp16610_c0_seq1
596bp
PREDICTED:_piggyBac_transposable_element-derived_protein_4-like_isoform_X2_[Papilio_polytes]
FPKM:0.56 TPM:0.52
7186 A_BomaMG_comp16610_c0_seq2
444bp
PREDICTED:_piggyBac_transposable_element-derived_protein_4-like_isoform_X2_[Papilio_polytes]
FPKM:0.41 TPM:0.38
7187 A_BomaMG_comp16612_c0_seq1
214bp
FPKM:0.00 TPM:0.00
7188 A_BomaMG_comp166140_c0_seq1
1220bp
cathepsin_B_precursor_[Bombyx_mori]
GO:0004175 F endopeptidase activity
GO:0004197 F cysteine-type endopeptidase activity
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005764 C lysosome
GO:0005901 C caveola
GO:0006508 P proteolysis
GO:0006914 P autophagy
GO:0007283 P spermatogenesis
GO:0007519 P skeletal muscle tissue development
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0009611 P response to wounding
GO:0009612 P response to mechanical stimulus
GO:0009749 P response to glucose
GO:0009897 C external side of plasma membrane
GO:0009986 C cell surface
GO:0014070 P response to organic cyclic compound
GO:0014075 P response to amine
GO:0016324 C apical plasma membrane
GO:0016787 F hydrolase activity
GO:0030984 F kininogen binding
GO:0032403 F protein-containing complex binding
GO:0034097 P response to cytokine
GO:0042277 F peptide binding
GO:0042383 C sarcolemma
GO:0042470 C melanosome
GO:0043434 P response to peptide hormone
GO:0043621 F protein self-association
GO:0045471 P response to ethanol
GO:0048471 C perinuclear region of cytoplasm
GO:0050790 P regulation of catalytic activity
GO:0051603 P proteolysis involved in cellular protein catabolic process
GO:0060548 P negative regulation of cell death
GO:0070670 P response to interleukin-4
GO:0071260 P cellular response to mechanical stimulus
FPKM:1.79 TPM:1.66
7189 A_BomaMG_comp166149_c0_seq1
295bp
Cation_channel_family_protein_[Oxytricha_trifallax]
FPKM:2.65 TPM:2.46
7190 A_BomaMG_comp16614_c0_seq1
240bp
hypothetical_protein_[Thiomicrospira_pelophila]
FPKM:0.53 TPM:0.49
7191 A_BomaMG_comp16615_c0_seq1
348bp
FPKM:1.22 TPM:1.13
7192 A_BomaMG_comp16617_c0_seq1
410bp
FPKM:0.90 TPM:0.84
7193 A_BomaMG_comp16617_c1_seq1
215bp
PREDICTED:_filamin-binding_LIM_protein_1,_partial_[Rhinopithecus_roxellana]
FPKM:3.17 TPM:2.93
7194 A_BomaMG_comp16618_c0_seq1
274bp
cuticular_protein_tweedle_motif_1_precursor_[Bombyx_mori]
FPKM:1.78 TPM:1.65
7195 A_BomaMG_comp16618_c1_seq1
220bp
cuticular_protein_tweedle_motif_1_precursor_[Bombyx_mori]
FPKM:0.72 TPM:0.67
7196 A_BomaMG_comp16619_c0_seq1
408bp
PREDICTED:_pre-mRNA_cleavage_complex_2_protein_Pcf11-like_isoform_X1_[Bombyx_mori]
FPKM:2.99 TPM:2.77
7197 A_BomaMG_comp16619_c1_seq1
647bp
PREDICTED:_pre-mRNA_cleavage_complex_2_protein_Pcf11-like_isoform_X1_[Bombyx_mori]
FPKM:1.16 TPM:1.08
7198 A_BomaMG_comp16622_c0_seq1
363bp
hypothetical_protein_KGM_20159_[Danaus_plexippus]
FPKM:0.93 TPM:0.86
7199 A_BomaMG_comp16623_c0_seq1
545bp
hypothetical_protein_[Bacteroides_coprocola]
FPKM:2.70 TPM:2.50
7200 A_BomaMG_comp16623_c1_seq1
306bp
Cu(I)-exporting_ATPase_[Marinobacter_algicola_DG893]
FPKM:1.62 TPM:1.50
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