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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
7021 A_BomaMG_comp1649_c0_seq1
229bp
PREDICTED:_NCK-interacting_protein_with_SH3_domain_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001784 F phosphotyrosine residue binding
GO:0002376 P immune system process
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004715 F non-membrane spanning protein tyrosine kinase activity
GO:0005102 F signaling receptor binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005758 C mitochondrial intermembrane space
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007229 P integrin-mediated signaling pathway
GO:0008150 P biological_process
GO:0008360 P regulation of cell shape
GO:0014068 P positive regulation of phosphatidylinositol 3-kinase signaling
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016477 P cell migration
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0019901 F protein kinase binding
GO:0030154 P cell differentiation
GO:0030335 P positive regulation of cell migration
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0032587 C ruffle membrane
GO:0034987 F immunoglobulin receptor binding
GO:0034988 F Fc-gamma receptor I complex binding
GO:0038083 P peptidyl-tyrosine autophosphorylation
GO:0042127 P regulation of cell population proliferation
GO:0042995 C cell projection
GO:0043306 P positive regulation of mast cell degranulation
GO:0043552 P positive regulation of phosphatidylinositol 3-kinase activity
GO:0045087 P innate immune response
GO:0045088 P regulation of innate immune response
GO:0045859 P regulation of protein kinase activity
GO:0046777 P protein autophosphorylation
GO:0050715 P positive regulation of cytokine production
GO:0050764 P regulation of phagocytosis
GO:0050830 P defense response to Gram-positive bacterium
GO:0070062 C extracellular exosome
FPKM:1.87 TPM:1.73
7022 A_BomaMG_comp16500_c0_seq1
228bp
FPKM:1.27 TPM:1.17
7023 A_BomaMG_comp165015_c0_seq1
288bp
Tetraspanin-31_[Habropoda_laboriosa]
GO:0005887 C integral component of plasma membrane
GO:0007166 P cell surface receptor signaling pathway
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:2.19 TPM:2.03
7024 A_BomaMG_comp16502_c0_seq1
331bp
PREDICTED:_polycomb_protein_l(1)G0020_[Papilio_polytes]
GO:0000166 F nucleotide binding
GO:0004402 F histone acetyltransferase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006364 P rRNA processing
GO:0007275 P multicellular organism development
GO:0008033 P tRNA processing
GO:0008080 F N-acetyltransferase activity
GO:0009267 P cellular response to starvation
GO:0016573 P histone acetylation
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0022008 P neurogenesis
FPKM:1.58 TPM:1.46
7025 A_BomaMG_comp165039_c0_seq1
647bp
PREDICTED:_tudor_and_KH_domain-containing_protein_[Bombyx_mori]
FPKM:1.75 TPM:1.62
7026 A_BomaMG_comp16503_c0_seq1
1114bp
hypothetical_protein_OBRU01_12883_[Operophtera_brumata]
FPKM:9.00 TPM:8.33
7027 A_BomaMG_comp165045_c0_seq1
253bp
PREDICTED:_uncharacterized_protein_LOC105841620_[Bombyx_mori]
FPKM:4.93 TPM:4.57
7028 A_BomaMG_comp16504_c0_seq1
885bp
FPKM:5.97 TPM:5.53
7029 A_BomaMG_comp16506_c0_seq1
459bp
FPKM:2.32 TPM:2.15
7030 A_BomaMG_comp16506_c1_seq1
1149bp
FPKM:4.62 TPM:4.28
7031 A_BomaMG_comp16507_c0_seq1
246bp
FPKM:2.94 TPM:2.72
7032 A_BomaMG_comp16508_c0_seq1
659bp
PREDICTED:_transcription_factor_E4F1-like_[Bombyx_mori]
FPKM:1.06 TPM:0.99
7033 A_BomaMG_comp16508_c1_seq1
736bp
FPKM:1.11 TPM:1.03
7034 A_BomaMG_comp16508_c2_seq1
243bp
FPKM:2.04 TPM:1.89
7035 A_BomaMG_comp165092_c0_seq1
405bp
FPKM:2.73 TPM:2.53
7036 A_BomaMG_comp16509_c0_seq1
1278bp
PREDICTED:_general_transcription_factor_IIE_subunit_1_isoform_X2_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
FPKM:2.56 TPM:2.37
7037 A_BomaMG_comp1650_c0_seq1
491bp
FPKM:1.10 TPM:1.01
7038 A_BomaMG_comp16510_c0_seq1
599bp
Lipoma-preferred_partner-like_[Papilio_xuthus]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005925 C focal adhesion
GO:0007155 P cell adhesion
GO:0008270 F zinc ion binding
GO:0030054 C cell junction
GO:0046872 F metal ion binding
FPKM:1.38 TPM:1.28
7039 A_BomaMG_comp16510_c1_seq1
265bp
PREDICTED:_lipoma-preferred_partner_homolog_[Papilio_polytes]
FPKM:0.78 TPM:0.72
7040 A_BomaMG_comp16513_c0_seq1
251bp
FPKM:0.92 TPM:0.85
7041 A_BomaMG_comp16514_c0_seq1
273bp
FPKM:1.80 TPM:1.67
7042 A_BomaMG_comp16515_c0_seq1
677bp
PREDICTED:_protein_MCM10_homolog_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003682 F chromatin binding
GO:0003688 F DNA replication origin binding
GO:0003697 F single-stranded DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005656 C nuclear pre-replicative complex
GO:0006260 P DNA replication
GO:0006267 P pre-replicative complex assembly involved in nuclear cell cycle DNA replication
GO:0006270 P DNA replication initiation
GO:0016321 P female meiosis chromosome segregation
GO:0030261 P chromosome condensation
GO:0031298 C replication fork protection complex
GO:0035214 P eye-antennal disc development
GO:0042023 P DNA endoreduplication
GO:0045678 P positive regulation of R7 cell differentiation
GO:0045931 P positive regulation of mitotic cell cycle
GO:0046872 F metal ion binding
GO:0070868 P obsolete heterochromatin organization involved in chromatin silencing
GO:1901693 P negative regulation of compound eye retinal cell apoptotic process
FPKM:1.09 TPM:1.01
7043 A_BomaMG_comp16515_c1_seq1
258bp
PREDICTED:_protein_MCM10_homolog_isoform_X1_[Bombyx_mori]
FPKM:0.42 TPM:0.39
7044 A_BomaMG_comp165160_c0_seq1
398bp
PREDICTED:_zinc_finger_protein_26-like_[Amyelois_transitella]
FPKM:2.51 TPM:2.32
7045 A_BomaMG_comp16517_c0_seq1
656bp
endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:2.00 TPM:1.85
7046 A_BomaMG_comp16517_c1_seq1
414bp
FPKM:1.90 TPM:1.76
7047 A_BomaMG_comp16518_c0_seq1
3505bp
parp_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003950 F NAD+ ADP-ribosyltransferase activity
GO:0005634 C nucleus
GO:0006471 P protein ADP-ribosylation
GO:0008270 F zinc ion binding
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0046872 F metal ion binding
GO:0051287 F NAD binding
FPKM:8.00 TPM:7.41
7048 A_BomaMG_comp16519_c0_seq1
245bp
hypothetical_protein_[Pseudomonas_syringae]
FPKM:2.48 TPM:2.30
7049 A_BomaMG_comp165209_c0_seq1
882bp
FPKM:1.45 TPM:1.34
7050 A_BomaMG_comp16520_c1_seq1
340bp
FPKM:20.04 TPM:18.56
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