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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
6991 A_BomaMG_comp16482_c0_seq1
309bp
FPKM:2.64 TPM:2.44
6992 A_BomaMG_comp164830_c0_seq1
373bp
PREDICTED:_LOW_QUALITY_PROTEIN:_probable_E3_ubiquitin_ligase_SUD1_[Brassica_oleracea_var._oleracea]
FPKM:2.65 TPM:2.46
6993 A_BomaMG_comp164831_c0_seq1
220bp
PREDICTED:_LOW_QUALITY_PROTEIN:_histone_H3_[Acyrthosiphon_pisum]
FPKM:1.45 TPM:1.34
6994 A_BomaMG_comp16483_c0_seq1
447bp
hypothetical_protein_[Bacillus_selenatarsenatis]
FPKM:0.64 TPM:0.59
6995 A_BomaMG_comp16483_c1_seq1
241bp
hypothetical_protein_[Shewanella_putrefaciens]
FPKM:1.05 TPM:0.97
6996 A_BomaMG_comp16484_c0_seq1
329bp
beta-1,3-glucan_recognition_protein_1_[Helicoverpa_armigera]
GO:0002376 P immune system process
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005576 C extracellular region
GO:0005975 P carbohydrate metabolic process
GO:0030246 F carbohydrate binding
GO:0045087 P innate immune response
GO:0045088 P regulation of innate immune response
FPKM:1.14 TPM:1.06
6997 A_BomaMG_comp16484_c1_seq1
298bp
beta-1,3-glucan_recognition_protein_1_[Helicoverpa_armigera]
GO:0002376 P immune system process
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005576 C extracellular region
GO:0005975 P carbohydrate metabolic process
GO:0030246 F carbohydrate binding
GO:0045087 P innate immune response
GO:0045088 P regulation of innate immune response
FPKM:0.86 TPM:0.80
6998 A_BomaMG_comp16486_c0_seq1
1295bp
PREDICTED:_putative_inorganic_phosphate_cotransporter_[Bombyx_mori]
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006814 P sodium ion transport
GO:0006820 P anion transport
GO:0015114 F phosphate ion transmembrane transporter activity
GO:0015293 F symporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0035435 P phosphate ion transmembrane transport
GO:0055085 P transmembrane transport
FPKM:1.70 TPM:1.58
6999 A_BomaMG_comp16486_c1_seq1
319bp
hypothetical_protein_KGM_16696_[Danaus_plexippus]
FPKM:1.72 TPM:1.59
7000 A_BomaMG_comp16487_c0_seq1
922bp
embryonic_development_factor_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005764 C lysosome
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006810 P transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0006890 P retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
GO:0007041 P lysosomal transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016192 P vesicle-mediated transport
GO:0030163 P protein catabolic process
GO:0032940 P secretion by cell
FPKM:0.80 TPM:0.74
7001 A_BomaMG_comp16487_c0_seq2
1047bp
embryonic_development_factor_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005764 C lysosome
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006810 P transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0006890 P retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
GO:0007041 P lysosomal transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016192 P vesicle-mediated transport
GO:0030163 P protein catabolic process
GO:0032940 P secretion by cell
FPKM:8.97 TPM:8.31
7002 A_BomaMG_comp16488_c0_seq1
367bp
FPKM:1.10 TPM:1.01
7003 A_BomaMG_comp16488_c1_seq1
220bp
similar_to_NM_057948_ER_lumen_protein_retaining_receptor_2_in_Drosophila_melanogaster_[Schistosoma_japonicum]
FPKM:1.45 TPM:1.34
7004 A_BomaMG_comp164917_c0_seq1
554bp
FPKM:2.09 TPM:1.94
7005 A_BomaMG_comp16491_c0_seq1
301bp
PREDICTED:_ankyrin_repeat_domain-containing_protein_17-like_[Bombyx_mori]
FPKM:6.46 TPM:5.98
7006 A_BomaMG_comp16491_c0_seq2
1571bp
PREDICTED:_ankyrin_repeat_domain-containing_protein_17-like_[Bombyx_mori]
GO:0001751 P compound eye photoreceptor cell differentiation
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005811 C lipid droplet
GO:0005829 C cytosol
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007275 P multicellular organism development
GO:0008283 P cell population proliferation
GO:0019233 P sensory perception of pain
GO:0019730 P antimicrobial humoral response
GO:0043066 P negative regulation of apoptotic process
GO:0046427 P positive regulation of receptor signaling pathway via JAK-STAT
GO:0051298 P centrosome duplication
FPKM:5.06 TPM:4.69
7007 A_BomaMG_comp16491_c0_seq3
734bp
PREDICTED:_ankyrin_repeat_domain-containing_protein_17-like_[Bombyx_mori]
GO:0000785 C chromatin
GO:0001955 P blood vessel maturation
GO:0002376 P immune system process
GO:0003676 F nucleic acid binding
GO:0003682 F chromatin binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006275 P regulation of DNA replication
GO:0016020 C membrane
GO:0016032 P viral process
GO:0042742 P defense response to bacterium
GO:0043123 P positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0044822 F RNA binding
GO:0045087 P innate immune response
GO:0045787 P positive regulation of cell cycle
GO:0051151 P negative regulation of smooth muscle cell differentiation
GO:1900087 P positive regulation of G1/S transition of mitotic cell cycle
GO:1900245 P positive regulation of MDA-5 signaling pathway
GO:1900246 P positive regulation of RIG-I signaling pathway
FPKM:7.05 TPM:6.53
7008 A_BomaMG_comp16492_c0_seq1
2189bp
PREDICTED:_NADH-cytochrome_b5_reductase_2_isoform_X1_[Bombyx_mori]
GO:0004128 F cytochrome-b5 reductase activity, acting on NAD(P)H
GO:0006629 P lipid metabolic process
GO:0006694 P steroid biosynthetic process
GO:0008202 P steroid metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016126 P sterol biosynthetic process
GO:0016491 F oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
FPKM:13.79 TPM:12.77
7009 A_BomaMG_comp16492_c0_seq2
2004bp
PREDICTED:_NADH-cytochrome_b5_reductase_2_isoform_X1_[Bombyx_mori]
GO:0004128 F cytochrome-b5 reductase activity, acting on NAD(P)H
GO:0006629 P lipid metabolic process
GO:0006694 P steroid biosynthetic process
GO:0008202 P steroid metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016126 P sterol biosynthetic process
GO:0016491 F oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
FPKM:113.56 TPM:105.15
7010 A_BomaMG_comp16493_c0_seq1
2768bp
vasa-like_protein_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0007275 P multicellular organism development
GO:0008104 P protein localization
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0030154 P cell differentiation
GO:0048477 P oogenesis
FPKM:7.35 TPM:6.80
7011 A_BomaMG_comp16494_c0_seq1
1345bp
PREDICTED:_probable_isoaspartyl_peptidase/L-asparaginase_GA20639_isoform_X1_[Bombyx_mori]
GO:0004067 F asparaginase activity
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008798 F beta-aspartyl-peptidase activity
GO:0016787 F hydrolase activity
GO:0033345 P asparagine catabolic process via L-aspartate
GO:0035071 P salivary gland cell autophagic cell death
GO:0048102 P autophagic cell death
FPKM:172.19 TPM:159.45
7012 A_BomaMG_comp164950_c0_seq1
1061bp
PREDICTED:_MAGUK_p55_subfamily_member_6_[Bombyx_mori]
GO:0004385 F guanylate kinase activity
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030165 F PDZ domain binding
GO:0046037 P GMP metabolic process
GO:0046710 P GDP metabolic process
GO:0070062 C extracellular exosome
FPKM:1.62 TPM:1.50
7013 A_BomaMG_comp16495_c0_seq1
215bp
retrovirus-related_gag-pol_polyprotein_[Lasius_niger]
FPKM:1.58 TPM:1.47
7014 A_BomaMG_comp16496_c0_seq1
1342bp
Mitochondrial_ribosomal_protein_S9_[Operophtera_brumata]
GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0003735 F structural constituent of ribosome
GO:0005730 C nucleolus
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005763 C mitochondrial small ribosomal subunit
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0044822 F RNA binding
GO:0070124 P mitochondrial translational initiation
GO:0070125 P mitochondrial translational elongation
FPKM:10.35 TPM:9.58
7015 A_BomaMG_comp16497_c0_seq1
387bp
Zinc_finger_HIT_domain-containing_protein_3_[Papilio_xuthus]
GO:0046872 F metal ion binding
FPKM:2.76 TPM:2.56
7016 A_BomaMG_comp16497_c0_seq2
645bp
Zinc_finger_HIT_domain-containing_protein_3_[Operophtera_brumata]
GO:0046872 F metal ion binding
FPKM:11.42 TPM:10.57
7017 A_BomaMG_comp164980_c0_seq1
315bp
FPKM:0.25 TPM:0.23
7018 A_BomaMG_comp16498_c0_seq1
455bp
FPKM:1.24 TPM:1.15
7019 A_BomaMG_comp16498_c1_seq1
850bp
PREDICTED:_calmodulin-binding_transcription_activator_2_[Bombyx_mori]
FPKM:1.11 TPM:1.03
7020 A_BomaMG_comp16499_c0_seq1
323bp
FPKM:3.10 TPM:2.87
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