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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
301 A_BomaMG_comp10613_c0_seq1
225bp
hypothetical_protein_PILCRDRAFT_1476_[Piloderma_croceum_F_1598]
FPKM:2.66 TPM:2.46
302 A_BomaMG_comp10614_c0_seq1
231bp
FPKM:1.21 TPM:1.12
303 A_BomaMG_comp106168_c0_seq1
1856bp
PREDICTED:_E3_ubiquitin-protein_ligase_Rnf220_isoform_X2_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
GO:0051865 P protein autoubiquitination
GO:0061630 F ubiquitin protein ligase activity
GO:0090263 P positive regulation of canonical Wnt signaling pathway
FPKM:2.36 TPM:2.19
304 A_BomaMG_comp1061_c0_seq1
329bp
PREDICTED:_nucleolin_2-like_[Bombyx_mori]
FPKM:1.14 TPM:1.06
305 A_BomaMG_comp1061_c1_seq1
413bp
PREDICTED:_nucleolin_2-like_[Bombyx_mori]
FPKM:1.32 TPM:1.22
306 A_BomaMG_comp106215_c0_seq1
518bp
FPKM:3.43 TPM:3.17
307 A_BomaMG_comp106223_c0_seq1
719bp
PREDICTED:_mediator_of_RNA_polymerase_II_transcription_subunit_12_[Bombyx_mori]
GO:0001104 F transcription coregulator activity
GO:0001105 F transcription coactivator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0007275 P multicellular organism development
GO:0007406 P negative regulation of neuroblast proliferation
GO:0016592 C mediator complex
GO:0022416 P chaeta development
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0035072 P ecdysone-mediated induction of salivary gland cell autophagic cell death
GO:0036011 P imaginal disc-derived leg segmentation
GO:0045498 P sex comb development
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048749 P compound eye development
GO:0070847 C core mediator complex
FPKM:3.28 TPM:3.03
308 A_BomaMG_comp106232_c0_seq1
436bp
PREDICTED:_DNA-directed_RNA_polymerase_III_subunit_RPC1_[Bombyx_mori]
GO:0001056 F RNA polymerase III activity
GO:0002376 P immune system process
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005666 C RNA polymerase III complex
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006383 P transcription by RNA polymerase III
GO:0016020 C membrane
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0032481 P positive regulation of type I interferon production
GO:0032728 P positive regulation of interferon-beta production
GO:0045087 P innate immune response
GO:0046872 F metal ion binding
GO:0051607 P defense response to virus
GO:1903146 P regulation of autophagy of mitochondrion
GO:1903955 P positive regulation of protein targeting to mitochondrion
FPKM:4.93 TPM:4.56
309 A_BomaMG_comp1062_c0_seq1
263bp
PREDICTED:_uncharacterized_protein_LOC106142706_[Amyelois_transitella]
FPKM:1.60 TPM:1.48
310 A_BomaMG_comp10630_c0_seq1
295bp
Penicillin-binding_protein_2,_partial_[Parcubacteria_group_bacterium_GW2011_GWA2_49_9]
FPKM:0.88 TPM:0.82
311 A_BomaMG_comp10632_c0_seq1
237bp
PREDICTED:_protein_TESPA1_isoform_X2_[Microcebus_murinus]
FPKM:1.11 TPM:1.02
312 A_BomaMG_comp10634_c0_seq1
227bp
PREDICTED:_uncharacterized_protein_LOC106720507_[Papilio_machaon]
FPKM:1.29 TPM:1.19
313 A_BomaMG_comp106385_c0_seq1
421bp
FPKM:1.84 TPM:1.70
314 A_BomaMG_comp1063_c0_seq1
375bp
PREDICTED:_filamin-A_isoform_X1_[Bombyx_mori]
GO:0001725 C stress fiber
GO:0003334 P keratinocyte development
GO:0003382 P epithelial cell morphogenesis
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005903 C brush border
GO:0005925 C focal adhesion
GO:0005938 C cell cortex
GO:0007519 P skeletal muscle tissue development
GO:0030018 C Z disc
GO:0030036 P actin cytoskeleton organization
GO:0030154 P cell differentiation
GO:0042802 F identical protein binding
GO:0044822 F RNA binding
GO:0070062 C extracellular exosome
FPKM:1.75 TPM:1.62
315 A_BomaMG_comp10641_c0_seq1
257bp
FPKM:1.71 TPM:1.58
316 A_BomaMG_comp106445_c0_seq1
747bp
FPKM:3.53 TPM:3.27
317 A_BomaMG_comp106469_c0_seq1
617bp
FPKM:2.57 TPM:2.38
318 A_BomaMG_comp10646_c0_seq1
202bp
FPKM:1.03 TPM:0.96
319 A_BomaMG_comp10649_c0_seq1
281bp
PREDICTED:_uncharacterized_protein_LOC105385757_[Plutella_xylostella]
FPKM:1.00 TPM:0.93
320 A_BomaMG_comp1064_c0_seq1
303bp
FPKM:1.38 TPM:1.28
321 A_BomaMG_comp10655_c0_seq1
340bp
FPKM:1.49 TPM:1.38
322 A_BomaMG_comp106560_c0_seq1
409bp
PREDICTED:_LOW_QUALITY_PROTEIN:_probable_phospholipid-transporting_ATPase_VD_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0004012 F ATPase-coupled intramembrane lipid transporter activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005654 C nucleoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006812 P cation transport
GO:0006869 P lipid transport
GO:0008152 P metabolic process
GO:0015914 P phospholipid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0034220 P ion transmembrane transport
GO:0045332 P phospholipid translocation
GO:0046872 F metal ion binding
FPKM:0.00 TPM:0.00
323 A_BomaMG_comp106560_c0_seq2
408bp
PREDICTED:_LOW_QUALITY_PROTEIN:_probable_phospholipid-transporting_ATPase_VD_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0004012 F ATPase-coupled intramembrane lipid transporter activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005654 C nucleoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006812 P cation transport
GO:0006869 P lipid transport
GO:0008152 P metabolic process
GO:0015914 P phospholipid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0034220 P ion transmembrane transport
GO:0045332 P phospholipid translocation
GO:0046872 F metal ion binding
FPKM:4.04 TPM:3.74
324 A_BomaMG_comp1065_c0_seq1
257bp
hypothetical_protein_[Meganema_perideroedes]
FPKM:1.71 TPM:1.58
325 A_BomaMG_comp10661_c0_seq1
203bp
PREDICTED:_neurofibromin_[Bombyx_mori]
GO:0000165 P MAPK cascade
GO:0001649 P osteoblast differentiation
GO:0001656 P metanephros development
GO:0001666 P response to hypoxia
GO:0001889 P liver development
GO:0001952 P regulation of cell-matrix adhesion
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006469 P negative regulation of protein kinase activity
GO:0007154 P cell communication
GO:0007165 P signal transduction
GO:0007265 P Ras protein signal transduction
GO:0007406 P negative regulation of neuroblast proliferation
GO:0007420 P brain development
GO:0007422 P peripheral nervous system development
GO:0007507 P heart development
GO:0008017 F microtubule binding
GO:0008289 F lipid binding
GO:0008429 F phosphatidylethanolamine binding
GO:0008542 P visual learning
GO:0014044 P Schwann cell development
GO:0014065 P phosphatidylinositol 3-kinase signaling
GO:0014069 C postsynaptic density
GO:0016020 C membrane
GO:0021510 P spinal cord development
GO:0021897 P forebrain astrocyte development
GO:0021987 P cerebral cortex development
GO:0022011 P myelination in peripheral nervous system
GO:0030036 P actin cytoskeleton organization
GO:0030198 P extracellular matrix organization
GO:0030199 P collagen fibril organization
GO:0030325 P adrenal gland development
GO:0030424 C axon
GO:0030425 C dendrite
GO:0031210 F phosphatidylcholine binding
GO:0031235 C intrinsic component of the cytoplasmic side of the plasma membrane
GO:0042060 P wound healing
GO:0042992 P obsolete negative regulation of transcription factor import into nucleus
GO:0043005 C neuron projection
GO:0043065 P positive regulation of apoptotic process
GO:0043087 P regulation of GTPase activity
GO:0043234 C protein-containing complex
GO:0043407 P negative regulation of MAP kinase activity
GO:0043409 P negative regulation of MAPK cascade
GO:0043473 P pigmentation
GO:0043525 P positive regulation of neuron apoptotic process
GO:0043547 P positive regulation of GTPase activity
GO:0045124 P regulation of bone resorption
GO:0045545 F syndecan binding
GO:0045664 P regulation of neuron differentiation
GO:0045685 P regulation of glial cell differentiation
GO:0045762 P positive regulation of adenylate cyclase activity
GO:0045765 P regulation of angiogenesis
GO:0046580 P negative regulation of Ras protein signal transduction
GO:0048147 P negative regulation of fibroblast proliferation
GO:0048485 P sympathetic nervous system development
GO:0048593 P camera-type eye morphogenesis
GO:0048715 P negative regulation of oligodendrocyte differentiation
GO:0048745 P smooth muscle tissue development
GO:0048844 P artery morphogenesis
GO:0048853 P forebrain morphogenesis
FPKM:1.01 TPM:0.94
326 A_BomaMG_comp106670_c0_seq1
1310bp
PREDICTED:_dual_specificity_protein_phosphatase_Mpk3_isoform_X1_[Papilio_xuthus]
GO:0000188 P obsolete inactivation of MAPK activity
GO:0002385 P mucosal immune response
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005737 C cytoplasm
GO:0006470 P protein dephosphorylation
GO:0007428 P primary branching, open tracheal system
GO:0007474 P imaginal disc-derived wing vein specification
GO:0008138 F protein tyrosine/serine/threonine phosphatase activity
GO:0016311 P dephosphorylation
GO:0016337 P cell-cell adhesion
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0017017 F MAP kinase tyrosine/serine/threonine phosphatase activity
GO:0035160 P maintenance of epithelial integrity, open tracheal system
GO:0035335 P peptidyl-tyrosine dephosphorylation
GO:0042127 P regulation of cell population proliferation
GO:0043409 P negative regulation of MAPK cascade
FPKM:2.55 TPM:2.36
327 A_BomaMG_comp1066_c0_seq1
384bp
FPKM:1.00 TPM:0.93
328 A_BomaMG_comp10675_c0_seq1
296bp
FPKM:1.17 TPM:1.08
329 A_BomaMG_comp10676_c0_seq1
266bp
FPKM:1.16 TPM:1.08
330 A_BomaMG_comp106866_c0_seq1
906bp
PREDICTED:_F-box/LRR-repeat_protein_15_[Amyelois_transitella]
GO:0000086 P G2/M transition of mitotic cell cycle
GO:0004842 F ubiquitin-protein transferase activity
GO:0005737 C cytoplasm
GO:0009953 P dorsal/ventral pattern formation
GO:0016567 P protein ubiquitination
GO:0019005 C SCF ubiquitin ligase complex
GO:0030282 P bone mineralization
GO:0030513 P positive regulation of BMP signaling pathway
GO:0031146 P SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
FPKM:2.90 TPM:2.68
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