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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp106168_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_E3_ubiquitin-protein_ligase_Rnf220_isoform_X2_[Bombyx_mori]
Ontology
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
GO:0051865 P protein autoubiquitination
GO:0061630 F ubiquitin protein ligase activity
GO:0090263 P positive regulation of canonical Wnt signaling pathway
Transcript
Level		FPKM:2.36 TPM:2.19
ORF Entry
Sequence
(Nucleotide)
GCGTCTTATCCTTTAGGCCACGACTTCTAATATACGAGAATCGTTTGTTTTAAGCCGGAG
CAATTTAGTTCATTCGTGCCATTCGCTGCTAACTGCTGAACTTTATACACCTCAAAGGCT
CAGGGCACTGCACTAAGCATCATTCATCGAAGACACACAATACACCGGTCTGTATAGACT
TGTAACCGGAGGAGACTACAAATCACTCAGTCATCTGATCTCAAACTAGGTAATAGATAC
GTTAGGAACACCCAGACCAGCAACAAAAACAAAGTTTGTTCATCATTGAAGTGTTTGCCC
GATGTGGGAATCAAAAATCAAAACCACGACCCTCAGCTCTACAAATCGTCAAATACAGCA
CCACTGTCTCACCAGATCAGTCACAGACACAGTAGACCTGAAGAGCCCTTCGAAGAAAGC
CTTCTGTCTCTTCTAAGCTGTCCCAGGTCATCTGTCACAGTTCAGTTCACATGTATATCC
TTCTCAGATGCTGTGCGGTGGTGATGGCGTTGCATTGCGGACATATCTTCTTGGCTTTCA
ACGACTCCAACCAGCAGACCTCACAGTAGACATGCCAGCACTGTATTGAGACGGCCGGAG
ACACGTATGACCCGAGACATATAAGACACTTTGACTCTGCGGCACCGTTCTGTTTCTTCT
CCATATCCTTTATTTTTGCCTTTAAAGCCTGGATCCTTGTCTCAGCGCTGGCTTCCACTA
AGCCGTTGCATTTGGGAGTTGGCTCTTCAATTCTATCTTCAGTCTCAGTTTCATTGGTTG
TTTGCATATCAGTCTGATCTTCGTTCGTTTGCTGTTCATCATTGGGTGCTATCCGAGATG
GAGAATACTGGGGCGGTCCATACAGCTCTGTGTCTTCATCACCATCCACCACCAGCGCTT
GATCATTGGAAGCCCTACGGACACATGTGGCCGCCCTTGAGTCCGCATCCTGCAGAGCCG
TCGCTCTGACCCTCCACTCACCACACCACTGGTATTCAGCACCAAACCCGCTGGCTGAAG
GTTCGTCATTTTCTACATCGATGCTGCCCTCCTCCGAGCTGGTATCAGGTATGTCTTCAT
CCATCTCTGCTCCTGTTCTCTTGAGGCACCTCAAGGCGTGCCTCTGTAGTTTGGAGGTTG
GTAAGGTTGTATTGCAAACAGGACATTCTCCGTTCTGTGGGGGAGGAGTGCTTCTCCGAC
GAGCTCGGAGACGGCGGAGGCGGTTCGCGTGTACTCGCTGGTAAACATCGCTGCCGGGAC
ACCCTGTGACATCGATACCATCATCAAGTTCTACATTAGTACTGGATCCGGGAACAGCTG
CATTAACATTGTTACTAACACTATTTACACTTAATTTTCTTTTCGAAGCACTGCCGGTGA
GTTTGTTGAGCCTAGCTAATTCCAAATCTAAATGATGTTCCAATTCACCTTGACGCACGG
TACAACTACACACCGGACAATTCGGTAATTCACTCACTTTTTTTCTACTTCTAACACTAT
TTAATATTACATTCTCGTCGTATATTTGCCCGTAATTAGTATTATGCTCATTCACGTTAT
TCGAACAGCCCTCCATGTTATTGTACATCAAAACTGGTAACATATTAGAAATTAATTTAA
AATTTGTTTTGTTTTGAGTGTTTTATAAATCTGATTACATCGCGATTTTAGTGATTGATT
AACGTTTTCTACCGTTTTAGAGATGTTAATGGGAGTTCGATTGTCATGTACGAACTCATC
TTGCTGTAATTTATTTATTTATTTACGTAATAAACGCCGATAAATTGTTTCAAAACAATA
GTTACAGTACAGAGTAGAGATCGTTTACACTTTTTTATTCCAATTTTTGATGTTTT
(1856 bp)

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