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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2971 A_BomaMG_comp131407_c0_seq1
283bp
FPKM:2.62 TPM:2.42
2972 A_BomaMG_comp13140_c0_seq1
1749bp
PREDICTED:_transcription_factor_EB-like_[Bombyx_mori]
FPKM:7.94 TPM:7.35
2973 A_BomaMG_comp13141_c0_seq1
1726bp
putative_growth_hormone_regulated_TBC_protein_1_[Danaus_plexippus]
GO:0005096 F GTPase activator activity
GO:0005622 C intracellular anatomical structure
GO:0006886 P intracellular protein transport
GO:0012505 C endomembrane system
GO:0017137 F small GTPase binding
GO:0031338 P regulation of vesicle fusion
GO:0090630 P activation of GTPase activity
FPKM:0.46 TPM:0.42
2974 A_BomaMG_comp13141_c0_seq2
1634bp
putative_growth_hormone_regulated_TBC_protein_1_[Danaus_plexippus]
GO:0005096 F GTPase activator activity
GO:0005622 C intracellular anatomical structure
GO:0006886 P intracellular protein transport
GO:0012505 C endomembrane system
GO:0017137 F small GTPase binding
GO:0031338 P regulation of vesicle fusion
GO:0090630 P activation of GTPase activity
FPKM:9.20 TPM:8.52
2975 A_BomaMG_comp131423_c0_seq1
491bp
FPKM:2.96 TPM:2.74
2976 A_BomaMG_comp13142_c0_seq1
229bp
FPKM:3.74 TPM:3.46
2977 A_BomaMG_comp13142_c1_seq1
311bp
FPKM:7.01 TPM:6.49
2978 A_BomaMG_comp13143_c0_seq1
1068bp
PREDICTED:_protein_BCCIP_homolog_[Amyelois_transitella]
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0019887 F protein kinase regulator activity
GO:0045859 P regulation of protein kinase activity
FPKM:13.02 TPM:12.05
2979 A_BomaMG_comp131444_c0_seq1
1899bp
putative_ATP-dependent_RNA_helicase_DDX51_[Operophtera_brumata]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0010501 P RNA secondary structure unwinding
GO:0016787 F hydrolase activity
GO:0022008 P neurogenesis
GO:0042254 P ribosome biogenesis
FPKM:1.79 TPM:1.66
2980 A_BomaMG_comp131446_c0_seq1
1279bp
PREDICTED:_LOW_QUALITY_PROTEIN:_E3_ubiquitin-protein_ligase_UBR1-like_[Bombyx_mori]
GO:0000151 C ubiquitin ligase complex
GO:0000785 C chromatin
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006342 P heterochromatin assembly
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0007141 P male meiosis I
GO:0007283 P spermatogenesis
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030163 P protein catabolic process
GO:0032007 P negative regulation of TOR signaling
GO:0033522 P histone H2A ubiquitination
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
GO:0070728 F leucine binding
GO:0071233 P cellular response to leucine
GO:0071596 P ubiquitin-dependent protein catabolic process via the N-end rule pathway
FPKM:2.47 TPM:2.28
2981 A_BomaMG_comp13144_c0_seq1
1366bp
PREDICTED:_COP9_signalosome_complex_subunit_2_[Papilio_machaon]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008180 C COP9 signalosome
GO:1903507 P negative regulation of nucleic acid-templated transcription
FPKM:12.45 TPM:11.53
2982 A_BomaMG_comp13146_c0_seq1
1613bp
PREDICTED:_protein_HGH1_homolog_[Plutella_xylostella]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
FPKM:8.37 TPM:7.75
2983 A_BomaMG_comp131470_c0_seq1
547bp
FPKM:2.32 TPM:2.15
2984 A_BomaMG_comp131477_c0_seq1
706bp
PREDICTED:_GSK3-beta_interaction_protein-like_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005737 C cytoplasm
GO:0008150 P biological_process
GO:0048471 C perinuclear region of cytoplasm
FPKM:2.91 TPM:2.69
2985 A_BomaMG_comp131485_c0_seq1
202bp
PREDICTED:_actin_cytoskeleton-regulatory_complex_protein_pan-1-like_[Bombyx_mori]
FPKM:1.03 TPM:0.96
2986 A_BomaMG_comp131486_c0_seq1
657bp
FPKM:1.71 TPM:1.58
2987 A_BomaMG_comp13148_c0_seq1
2159bp
PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_16_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003713 F transcription coactivator activity
GO:0004197 F cysteine-type endopeptidase activity
GO:0004843 F thiol-dependent deubiquitinase
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008150 P biological_process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008270 F zinc ion binding
GO:0010468 P regulation of gene expression
GO:0016568 P chromatin organization
GO:0016578 P histone deubiquitination
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0035522 P monoubiquitinated histone H2A deubiquitination
GO:0036459 F thiol-dependent deubiquitinase
GO:0042393 F histone binding
GO:0043130 F ubiquitin binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045901 P positive regulation of translational elongation
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0051289 P protein homotetramerization
GO:0051301 P cell division
GO:0051726 P regulation of cell cycle
GO:0070537 P histone H2A K63-linked deubiquitination
FPKM:8.19 TPM:7.59
2988 A_BomaMG_comp131499_c0_seq1
950bp
FPKM:2.11 TPM:1.96
2989 A_BomaMG_comp13150_c0_seq1
2449bp
PREDICTED:_lipoyl_synthase,_mitochondrial_[Papilio_machaon]
GO:0003824 F catalytic activity
GO:0005739 C mitochondrion
GO:0009107 P lipoate biosynthetic process
GO:0016740 F transferase activity
GO:0016992 F lipoate synthase activity
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
FPKM:6.23 TPM:5.77
2990 A_BomaMG_comp13151_c0_seq1
383bp
FPKM:9.92 TPM:9.19
2991 A_BomaMG_comp13152_c0_seq1
220bp
FPKM:5.79 TPM:5.36
2992 A_BomaMG_comp131531_c0_seq1
674bp
FPKM:1.51 TPM:1.40
2993 A_BomaMG_comp13153_c0_seq1
575bp
PREDICTED:_39S_ribosomal_protein_L52,_mitochondrial_[Amyelois_transitella]
GO:0003735 F structural constituent of ribosome
GO:0005739 C mitochondrion
GO:0005762 C mitochondrial large ribosomal subunit
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
FPKM:9.99 TPM:9.25
2994 A_BomaMG_comp13154_c0_seq1
298bp
FPKM:5.46 TPM:5.06
2995 A_BomaMG_comp13155_c0_seq1
830bp
PREDICTED:_uncharacterized_protein_C6orf203_homolog_[Papilio_xuthus]
GO:0003674 F molecular_function
GO:0005739 C mitochondrion
GO:0008150 P biological_process
FPKM:8.88 TPM:8.22
2996 A_BomaMG_comp13156_c0_seq1
477bp
FPKM:5.16 TPM:4.78
2997 A_BomaMG_comp13157_c0_seq1
232bp
endonuclease_and_reverse_transcriptase-like_protein_[Bombyx_mori]
FPKM:0.60 TPM:0.55
2998 A_BomaMG_comp13159_c0_seq1
2481bp
PREDICTED:_zinc_finger_protein_Xfin-like_[Papilio_polytes]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0042981 P regulation of apoptotic process
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
FPKM:2.07 TPM:1.92
2999 A_BomaMG_comp1315_c0_seq1
365bp
hypothetical_protein_[Burkholderia_andropogonis]
FPKM:0.55 TPM:0.51
3000 A_BomaMG_comp131603_c0_seq1
631bp
FPKM:2.19 TPM:2.02
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