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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
3001 A_BomaMG_comp13160_c0_seq1
1419bp
PREDICTED:_WAS/WASL-interacting_protein_family_member_1_isoform_X1_[Bombyx_mori]
FPKM:6.90 TPM:6.39
3002 A_BomaMG_comp13160_c0_seq2
445bp
PREDICTED:_vegetative_cell_wall_protein_gp1_isoform_X2_[Bombyx_mori]
FPKM:3.70 TPM:3.43
3003 A_BomaMG_comp131619_c0_seq1
894bp
FPKM:2.00 TPM:1.85
3004 A_BomaMG_comp13162_c0_seq1
678bp
hypothetical_protein_[Spirochaeta_thermophila]
FPKM:9.35 TPM:8.65
3005 A_BomaMG_comp13163_c0_seq1
279bp
hypothetical_protein_RR48_09667_[Papilio_machaon]
FPKM:5.44 TPM:5.03
3006 A_BomaMG_comp131643_c0_seq1
417bp
PREDICTED:_HEAT_repeat-containing_protein_5B_[Papilio_xuthus]
FPKM:3.46 TPM:3.20
3007 A_BomaMG_comp13165_c0_seq1
1825bp
PREDICTED:_cholinesterase-like_[Bombyx_mori]
GO:0003990 F acetylcholinesterase activity
GO:0004104 F cholinesterase activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005641 C nuclear envelope lumen
GO:0005783 C endoplasmic reticulum
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0042802 F identical protein binding
GO:0052689 F carboxylic ester hydrolase activity
GO:0072562 C blood microparticle
FPKM:13.85 TPM:12.83
3008 A_BomaMG_comp13165_c1_seq1
259bp
FPKM:10.04 TPM:9.29
3009 A_BomaMG_comp131668_c0_seq1
732bp
larval_cuticle_protein_LCP-22_precursor_[Bombyx_mori]
GO:0042302 F structural constituent of cuticle
FPKM:2.77 TPM:2.56
3010 A_BomaMG_comp13166_c0_seq1
1684bp
PREDICTED:_uncharacterized_protein_LOC101741377_isoform_X4_[Bombyx_mori]
FPKM:6.91 TPM:6.40
3011 A_BomaMG_comp131679_c0_seq1
562bp
PREDICTED:_uncharacterized_protein_LOC105382160_[Plutella_xylostella]
FPKM:1.87 TPM:1.73
3012 A_BomaMG_comp13167_c0_seq1
1888bp
PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101744503_[Bombyx_mori]
FPKM:6.00 TPM:5.55
3013 A_BomaMG_comp131692_c0_seq1
913bp
PREDICTED:_LOW_QUALITY_PROTEIN:_DNA_replication_licensing_factor_Mcm6-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003674 F molecular_function
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006270 P DNA replication initiation
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0016787 F hydrolase activity
GO:0032508 P DNA duplex unwinding
GO:0042555 C MCM complex
GO:0046872 F metal ion binding
GO:0051301 P cell division
FPKM:1.90 TPM:1.76
3014 A_BomaMG_comp13171_c0_seq1
2114bp
PREDICTED:_UDP-glucuronic_acid_decarboxylase_1_isoform_X1_[Papilio_polytes]
GO:0005739 C mitochondrion
GO:0005794 C Golgi apparatus
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016829 F lyase activity
GO:0016831 F carboxy-lyase activity
GO:0032580 C Golgi cisterna membrane
GO:0033320 P UDP-D-xylose biosynthetic process
GO:0042803 F protein homodimerization activity
GO:0048040 F UDP-glucuronate decarboxylase activity
GO:0051262 P protein tetramerization
GO:0070062 C extracellular exosome
GO:0070403 F NAD+ binding
FPKM:8.56 TPM:7.93
3015 A_BomaMG_comp131720_c0_seq1
408bp
PREDICTED:_kelch-like_ECH-associated_protein_1_isoform_X2_[Papilio_xuthus]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008134 F transcription factor binding
GO:0010499 P proteasomal ubiquitin-independent protein catabolic process
GO:0016567 P protein ubiquitination
GO:0031463 C Cul3-RING ubiquitin ligase complex
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0042994 P cytoplasmic sequestering of transcription factor
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0043433 P negative regulation of DNA-binding transcription factor activity
FPKM:2.69 TPM:2.49
3016 A_BomaMG_comp13172_c0_seq1
587bp
FPKM:89.06 TPM:82.47
3017 A_BomaMG_comp131733_c0_seq1
212bp
FPKM:0.84 TPM:0.78
3018 A_BomaMG_comp13173_c0_seq1
994bp
regulator_[Sulfuricurvum_sp._PC08-66]
FPKM:4.92 TPM:4.55
3019 A_BomaMG_comp131749_c0_seq1
718bp
hypothetical_protein_JCGZ_13507_[Jatropha_curcas]
FPKM:2.15 TPM:1.99
3020 A_BomaMG_comp13175_c0_seq1
1411bp
PREDICTED:_sister_chromatid_cohesion_protein_DCC1_[Amyelois_transitella]
GO:0000775 C chromosome, centromeric region
GO:0000785 C chromatin
GO:0003677 F DNA binding
GO:0003689 F DNA clamp loader activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006260 P DNA replication
GO:0006275 P regulation of DNA replication
GO:0007049 P cell cycle
GO:0031390 C Ctf18 RFC-like complex
GO:0034088 P maintenance of mitotic sister chromatid cohesion
GO:0034421 P post-translational protein acetylation
GO:0043142 F single-stranded DNA helicase activity
GO:1900264 P positive regulation of DNA-directed DNA polymerase activity
FPKM:7.49 TPM:6.93
3021 A_BomaMG_comp13176_c0_seq1
1237bp
PREDICTED:_cell_division_cycle_5-like_protein_[Bombyx_mori]
GO:0000398 P mRNA splicing, via spliceosome
GO:0000974 C Prp19 complex
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005662 C DNA replication factor A complex
GO:0005681 C spliceosomal complex
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0008380 P RNA splicing
GO:0016020 C membrane
GO:0016607 C nuclear speck
GO:0044822 F RNA binding
GO:0071013 C catalytic step 2 spliceosome
GO:0071987 F WD40-repeat domain binding
GO:0072422 P DNA damage checkpoint signaling
FPKM:8.82 TPM:8.16
3022 A_BomaMG_comp131776_c0_seq1
387bp
PREDICTED:_E3_ubiquitin-protein_ligase_MIB1_[Bombyx_mori]
GO:0001568 P blood vessel development
GO:0001701 P in utero embryonic development
GO:0001756 P somitogenesis
GO:0001841 P neural tube formation
GO:0001947 P heart looping
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0006897 P endocytosis
GO:0007219 P Notch signaling pathway
GO:0007507 P heart development
GO:0008270 F zinc ion binding
GO:0014069 C postsynaptic density
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0031410 C cytoplasmic vesicle
GO:0045665 P negative regulation of neuron differentiation
GO:0045807 P positive regulation of endocytosis
GO:0046872 F metal ion binding
FPKM:3.46 TPM:3.21
3023 A_BomaMG_comp131778_c0_seq1
522bp
hypothetical_protein_NECHADRAFT_47056_[Nectria_haematococca_mpVI_77-13-4]
FPKM:2.39 TPM:2.21
3024 A_BomaMG_comp13177_c0_seq1
4121bp
PREDICTED:_multidrug_resistance-associated_protein_7_[Papilio_machaon]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005765 C lysosomal membrane
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0043225 F ATPase-coupled inorganic anion transmembrane transporter activity
GO:0055085 P transmembrane transport
GO:0098656 P anion transmembrane transport
FPKM:6.37 TPM:5.90
3025 A_BomaMG_comp131788_c0_seq1
1347bp
PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_34-like_[Bombyx_mori]
GO:0000124 C SAGA complex
GO:0004197 F cysteine-type endopeptidase activity
GO:0004843 F thiol-dependent deubiquitinase
GO:0005515 F protein binding
GO:0005829 C cytosol
GO:0006355 P regulation of transcription, DNA-templated
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016055 P Wnt signaling pathway
GO:0016578 P histone deubiquitination
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0036459 F thiol-dependent deubiquitinase
GO:0071108 P protein K48-linked deubiquitination
GO:0090263 P positive regulation of canonical Wnt signaling pathway
FPKM:2.32 TPM:2.15
3026 A_BomaMG_comp13179_c0_seq1
1864bp
legumaturain_[Bombyx_mori]
GO:0002376 P immune system process
GO:0005576 C extracellular region
GO:0005764 C lysosome
GO:0016491 F oxidoreductase activity
GO:0016667 F oxidoreductase activity, acting on a sulfur group of donors
GO:0042590 P antigen processing and presentation of exogenous peptide antigen via MHC class I
GO:0055114 P obsolete oxidation-reduction process
FPKM:7.18 TPM:6.64
3027 A_BomaMG_comp1317_c0_seq1
222bp
PREDICTED:_dedicator_of_cytokinesis_protein_7_[Bombyx_mori]
GO:0000226 P microtubule cytoskeleton organization
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005622 C intracellular anatomical structure
GO:0005925 C focal adhesion
GO:0007264 P small GTPase mediated signal transduction
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007409 P axonogenesis
GO:0008180 C COP9 signalosome
GO:0022027 P interkinetic nuclear migration
GO:0030154 P cell differentiation
GO:0030424 C axon
GO:0030426 C growth cone
GO:0031175 P neuron projection development
GO:0033138 P positive regulation of peptidyl-serine phosphorylation
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0045178 C basal part of cell
GO:0045200 P establishment of neuroblast polarity
GO:0048365 F small GTPase binding
GO:0050767 P regulation of neurogenesis
GO:0090630 P activation of GTPase activity
GO:1904754 P positive regulation of vascular associated smooth muscle cell migration
FPKM:2.10 TPM:1.94
3028 A_BomaMG_comp131801_c0_seq1
220bp
serine_protease_inhibitor_33_precursor_[Bombyx_mori]
FPKM:0.00 TPM:0.00
3029 A_BomaMG_comp13180_c0_seq1
308bp
FPKM:11.87 TPM:10.99
3030 A_BomaMG_comp131825_c0_seq1
401bp
Ubiquitin_carboxyl-terminal_hydrolase_[Operophtera_brumata]
GO:0003713 F transcription coactivator activity
GO:0004197 F cysteine-type endopeptidase activity
GO:0004843 F thiol-dependent deubiquitinase
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008270 F zinc ion binding
GO:0009952 P anterior/posterior pattern specification
GO:0010468 P regulation of gene expression
GO:0016568 P chromatin organization
GO:0016578 P histone deubiquitination
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0036459 F thiol-dependent deubiquitinase
GO:0042393 F histone binding
GO:0043130 F ubiquitin binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0051289 P protein homotetramerization
GO:0051301 P cell division
GO:0051726 P regulation of cell cycle
FPKM:4.02 TPM:3.72
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