SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp131444_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		putative_ATP-dependent_RNA_helicase_DDX51_[Operophtera_brumata]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0010501 P RNA secondary structure unwinding
GO:0016787 F hydrolase activity
GO:0022008 P neurogenesis
GO:0042254 P ribosome biogenesis
Transcript
Level		FPKM:1.79 TPM:1.66
ORF Entry
Sequence
(Nucleotide)
GAAGTTTTTACATGTGTAACCCTTATTATTTTTAAATTAATGAATTACTTATCAAATTTT
TGAAAGAATATCTCAATAAACCGTAACAAGATTTCTCATCATAATTGTTCTGAGGTTGCG
TAGCTTTAGTCTTTAATTTCAGATCGCCACCATGGATTTGTTTATTATTAACAGATATAA
TGACACGAATGATGATACACATATAATAGAACAAGAAGCAAAACGCCTAGAACAATTGAA
GCAAAGAATTGAAGAACGTAGAAAAGCATTTTCAGTAAAAAAATCGTCTGATGTCATTAC
TTTGAAAGAAGAAAAACAAACTGAAATTTTACCTGACCTTCCCGTTTCTACTAATGATGA
GCTGTCAACGGAAATACCAAAACCAAATACACCTCTACAACCAAAAGAAAAAAAATCTGC
AGAAAAACAAAAAGAATTTAAAGTTCTTGGATCAAGTGACTTTCAAAAAAAATCTAAGGT
GCAGAGAATATTACCATACTGGCTATCGCATCCTACAGTTGTATCAAGAGATTTAAATGA
ACTATCTTGTCCAGTTGAAGAACAAGAATGGCTACACCCAGTAATAAAGTCTACTTTATT
GAGCGAAGGCATAACAAAACTATTCCCAGTTCAAAATCAAGTGGTACCATTCATTTTAAA
TGAGCATATGTTGCCAAAATTATTTCAACCTCGTGACGTTTGCGTCTCAGCACCAACCGG
AAGTGGCAAAACACTGTCATTTGTCATACCTATAGTGCAGCTTCTAATGAAAGATGTGGG
TTGCAAAATACGAGCACTTGTGGTATTACCAGTACAAGAGTTAGCTGCTCAAGTTGCTAA
AGTATTTAAGAAGTATTGCAATAGAACTCATCTGAAAGTTGCTCTCTTGAGTGGTTCAGT
TCCCTTTCAACAGGAACAGCAAGAGGTTGTCAGATTTACTGAATCAGTAGGATGGGTCAG
TAAAGTAGAAATCATTGTATGTACAGCAGGAAGATTGGTTGAGCACTTAAAGACTACAGA
AGGTTTCAATTTACAACATTTAAAGTTTTTAGTTATTGATGAAGCTGACCGAATTATGGA
TAACATACAAAATGATTGGCTCTACCATGTTGATCATCATATCAAACAAGGGAGTGAATT
GATGACAGGGAAAGTTCAGAGTTTAAATTGGAAAAATGTGAGTAAACAAAAATTAGCACC
CCAAAAATTACTCTTCTCCGCCACATTATCCCAAGATCCAGAGAAGTTGGAACAGTGGGG
GCTATTTCAACCAAAATTGTTTTCTGCTGCCACTAATGAATGTTTTGAAGATGAAGACCA
AATCAGAAAATATGCTACACCTGCAGAACTTAAGGAACACTATGTTGTATGTGAAGCAGA
GAACAAACCTCTTGTACTTTATAATTTTTTAGTAGAACAAAAATGGGATAAAGTATTATG
TTTTACAAATGCTGCTGAAACAACTCACAGGCTAACTGTACTTTTAAACACATGGGCTTG
TAAAGGATTAAAAGTAGCTGAATTGTCAGCCGCTTTAGATAGATCAATGAGGGAAAATGT
TTTAAAGAAATTCATGCTCTCTGAAATTGATGTGTTAATCAGCACTGATGCATTAGCCAG
AGGTATCGATATACCAGATTGCAACTACGTAATATCTTATGATCCTCCACGGAACATAAA
AACATACATACATCGAGTTGGTAGAACAGGAAGAGCTGGAAAGATTGGTAAAGCAGTAAC
TGTGCTATTGCCAAGTCAAATCAGCTTATTTAAGGATCTTATAAAAGCAGGAGGAAAAGA
GGAAATTCCGGAAATTAAAATTAATACTGATGTAATTGATCGTTTATTCGAAAGTTATGC
ATCTGCCATGAACACAACGAGAGAAAAAATTAATTCAGA
(1899 bp)

- SilkBase 1999-2023 -