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Search Assembled RNA-Seq

No.

Name
Length

Chromosome No./Scaffold Id
Scaffold Length

BLAST (vs nr)

Gene ontology

Transcript
Level

2461

A_BomaMG_comp12634_c0_seq2

750bp

PREDICTED:_protein_MON2_homolog_isoform_X1_[Papilio_xuthus]

GO:0005519	F	cytoskeletal regulatory protein binding
GO:0005768	C	endosome
GO:0005794	C	Golgi apparatus
GO:0006810	P	transport
GO:0007318	P	pole plasm protein localization
GO:0015031	P	protein transport
GO:0031532	P	actin cytoskeleton reorganization

FPKM:3.10 TPM:2.87

2462

A_BomaMG_comp12635_c0_seq1

1494bp

PREDICTED:_peptidyl-prolyl_cis-trans_isomerase_CWC27_homolog_isoform_X1_[Bombyx_mori]

GO:0000413	P	protein peptidyl-prolyl isomerization
GO:0003755	F	peptidyl-prolyl cis-trans isomerase activity
GO:0005634	C	nucleus
GO:0006457	P	protein folding
GO:0016853	F	isomerase activity
GO:0071013	C	catalytic step 2 spliceosome

FPKM:3.97 TPM:3.68

2463

A_BomaMG_comp12635_c0_seq2

1372bp

PREDICTED:_peptidyl-prolyl_cis-trans_isomerase_CWC27_homolog_isoform_X1_[Bombyx_mori]

GO:0000413	P	protein peptidyl-prolyl isomerization
GO:0003755	F	peptidyl-prolyl cis-trans isomerase activity
GO:0005634	C	nucleus
GO:0006457	P	protein folding
GO:0016853	F	isomerase activity
GO:0071013	C	catalytic step 2 spliceosome

FPKM:1.70 TPM:1.57

2464

A_BomaMG_comp12636_c0_seq1

673bp

PREDICTED:_splicing_factor,_arginine/serine-rich_15_[Bombyx_mori]

FPKM:5.10 TPM:4.72

2465

A_BomaMG_comp12637_c0_seq1

2914bp

PREDICTED:_uncharacterized_protein_LOC101737617_isoform_X3_[Bombyx_mori]

FPKM:4.62 TPM:4.27

2466

A_BomaMG_comp12638_c0_seq1

1649bp

PREDICTED:_UDP-glucose_6-dehydrogenase_[Papilio_xuthus]

GO:0002121	P	inter-male aggressive behavior
GO:0003979	F	UDP-glucose 6-dehydrogenase activity
GO:0005634	C	nucleus
GO:0005829	C	cytosol
GO:0005975	P	carbohydrate metabolic process
GO:0006024	P	glycosaminoglycan biosynthetic process
GO:0006065	P	UDP-glucuronate biosynthetic process
GO:0007166	P	cell surface receptor signaling pathway
GO:0007224	P	smoothened signaling pathway
GO:0007367	P	segment polarity determination
GO:0007427	P	epithelial cell migration, open tracheal system
GO:0007428	P	primary branching, open tracheal system
GO:0007476	P	imaginal disc-derived wing morphogenesis
GO:0007507	P	heart development
GO:0007509	P	mesoderm migration involved in gastrulation
GO:0008543	P	fibroblast growth factor receptor signaling pathway
GO:0015012	P	heparan sulfate proteoglycan biosynthetic process
GO:0015014	P	heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process
GO:0016055	P	Wnt signaling pathway
GO:0016319	P	mushroom body development
GO:0016491	F	oxidoreductase activity
GO:0016616	F	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0030206	P	chondroitin sulfate biosynthetic process
GO:0042048	P	olfactory behavior
GO:0051287	F	NAD binding
GO:0055114	P	obsolete oxidation-reduction process

FPKM:5.60 TPM:5.19

2467

A_BomaMG_comp126397_c0_seq1

215bp

FPKM:1.58 TPM:1.47

2468

A_BomaMG_comp12640_c0_seq1

1532bp

beadex/dLMO_protein_[Bombyx_mori]

GO:0000122	P	negative regulation of transcription by RNA polymerase II
GO:0005634	C	nucleus
GO:0008270	F	zinc ion binding
GO:0045944	P	positive regulation of transcription by RNA polymerase II
GO:0046013	P	regulation of T cell homeostatic proliferation
GO:0046872	F	metal ion binding

FPKM:0.52 TPM:0.48

2469

A_BomaMG_comp12640_c0_seq2

1660bp

beadex/dLMO_protein_[Bombyx_mori]

GO:0000122	P	negative regulation of transcription by RNA polymerase II
GO:0005634	C	nucleus
GO:0008270	F	zinc ion binding
GO:0045944	P	positive regulation of transcription by RNA polymerase II
GO:0046013	P	regulation of T cell homeostatic proliferation
GO:0046872	F	metal ion binding

FPKM:4.46 TPM:4.13

2470

A_BomaMG_comp12641_c0_seq1

7616bp

titin2_[Bombyx_mori]

GO:0000794	C	condensed nuclear chromosome
GO:0003779	F	actin binding
GO:0005515	F	protein binding
GO:0005634	C	nucleus
GO:0005694	C	chromosome
GO:0005737	C	cytoplasm
GO:0005863	C	striated muscle myosin thick filament
GO:0005875	C	microtubule associated complex
GO:0007049	P	cell cycle
GO:0007062	P	sister chromatid cohesion
GO:0007067	P	mitotic cell cycle
GO:0007076	P	mitotic chromosome condensation
GO:0007498	P	mesoderm development
GO:0007517	P	muscle organ development
GO:0007519	P	skeletal muscle tissue development
GO:0007520	P	myoblast fusion
GO:0007522	P	visceral muscle development
GO:0007525	P	somatic muscle development
GO:0008307	F	structural constituent of muscle
GO:0016203	P	muscle attachment
GO:0019233	P	sensory perception of pain
GO:0030017	C	sarcomere
GO:0030018	C	Z disc
GO:0031674	C	I band
GO:0035206	P	regulation of hemocyte proliferation
GO:0040011	P	locomotion
GO:0045214	P	sarcomere organization
GO:0051301	P	cell division

FPKM:3.89 TPM:3.60

2471

A_BomaMG_comp12642_c0_seq1

2169bp

PREDICTED:_kinesin-related_protein_6-like_isoform_X2_[Papilio_xuthus]

GO:0003674	F	molecular_function
GO:0003676	F	nucleic acid binding
GO:0003677	F	DNA binding
GO:0005730	C	nucleolus
GO:0008150	P	biological_process
GO:0046872	F	metal ion binding

FPKM:3.92 TPM:3.63

2472

A_BomaMG_comp12642_c0_seq2

1753bp

PREDICTED:_kinesin-related_protein_6-like_isoform_X1_[Papilio_xuthus]

FPKM:0.25 TPM:0.24

2473

A_BomaMG_comp126431_c0_seq1

480bp

FPKM:4.09 TPM:3.79

2474

A_BomaMG_comp12644_c0_seq1

2432bp

PREDICTED:_uncharacterized_protein_LOC106123997_[Papilio_xuthus]

GO:0000166	F	nucleotide binding
GO:0003676	F	nucleic acid binding
GO:0003723	F	RNA binding
GO:0005634	C	nucleus
GO:0005730	C	nucleolus
GO:0008150	P	biological_process
GO:0044822	F	RNA binding

FPKM:4.91 TPM:4.54

2475

A_BomaMG_comp12645_c0_seq1

3190bp

PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101740551_[Bombyx_mori]

GO:0000166	F	nucleotide binding
GO:0003824	F	catalytic activity
GO:0004484	F	mRNA guanylyltransferase activity
GO:0004651	F	polynucleotide 5'-phosphatase activity
GO:0004725	F	protein tyrosine phosphatase activity
GO:0005525	F	GTP binding
GO:0005634	C	nucleus
GO:0006370	P	7-methylguanosine mRNA capping
GO:0006396	P	RNA processing
GO:0006397	P	mRNA processing
GO:0006470	P	protein dephosphorylation
GO:0008138	F	protein tyrosine/serine/threonine phosphatase activity
GO:0008152	P	metabolic process
GO:0008192	F	RNA guanylyltransferase activity
GO:0016311	P	dephosphorylation
GO:0016740	F	transferase activity
GO:0016779	F	nucleotidyltransferase activity
GO:0016787	F	hydrolase activity
GO:0016791	F	phosphatase activity
GO:0035335	P	peptidyl-tyrosine dephosphorylation
GO:0050355	F	triphosphatase activity
GO:0098507	P	polynucleotide 5' dephosphorylation

FPKM:5.11 TPM:4.74

2476

A_BomaMG_comp12646_c0_seq1

1074bp

FPKM:4.66 TPM:4.32

2477

A_BomaMG_comp12647_c0_seq1

1248bp

short-chain_dehydrogenase_[Danaus_plexippus]

GO:0001523	P	retinoid metabolic process
GO:0001917	C	photoreceptor inner segment
GO:0004745	F	NAD-retinol dehydrogenase activity
GO:0005622	C	intracellular anatomical structure
GO:0005783	C	endoplasmic reticulum
GO:0005789	C	endoplasmic reticulum membrane
GO:0008152	P	metabolic process
GO:0016020	C	membrane
GO:0016021	C	integral component of membrane
GO:0016062	P	adaptation of rhodopsin mediated signaling
GO:0016491	F	oxidoreductase activity
GO:0016616	F	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0042572	P	retinol metabolic process
GO:0042574	P	retinal metabolic process
GO:0052650	F	NADP-retinol dehydrogenase activity
GO:0055114	P	obsolete oxidation-reduction process

FPKM:6.31 TPM:5.85

2478

A_BomaMG_comp12648_c0_seq1

1240bp

PREDICTED:_suppressor_of_cytokine_signaling_7-like_isoform_X2_[Papilio_xuthus]

GO:0004860	F	protein kinase inhibitor activity
GO:0005737	C	cytoplasm
GO:0006469	P	negative regulation of protein kinase activity
GO:0007173	P	epidermal growth factor receptor signaling pathway
GO:0007175	P	negative regulation of epidermal growth factor-activated receptor activity
GO:0007259	P	receptor signaling pathway via JAK-STAT
GO:0009968	P	negative regulation of signal transduction
GO:0016567	P	protein ubiquitination
GO:0019221	P	cytokine-mediated signaling pathway
GO:0032436	P	positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0035556	P	intracellular signal transduction
GO:0040008	P	regulation of growth
GO:0042059	P	negative regulation of epidermal growth factor receptor signaling pathway
GO:0046426	P	negative regulation of receptor signaling pathway via JAK-STAT

FPKM:6.45 TPM:5.98

2479

A_BomaMG_comp12648_c0_seq2

565bp

SOCS5_protein_[Bombyx_mori]

FPKM:1.34 TPM:1.24

2480

A_BomaMG_comp126496_c0_seq1

996bp

PREDICTED:_zinc_finger_FYVE_domain-containing_protein_26_isoform_X2_[Bombyx_mori]

GO:0046872

metal ion binding

FPKM:2.24 TPM:2.08

2481

A_BomaMG_comp12650_c0_seq1

327bp

FPKM:2.78 TPM:2.58

2482

A_BomaMG_comp12651_c0_seq1

439bp

FPKM:3.56 TPM:3.29

2483

A_BomaMG_comp12652_c0_seq1

1745bp

PREDICTED:_protein_Smaug_[Amyelois_transitella]

FPKM:4.70 TPM:4.35

2484

A_BomaMG_comp12653_c0_seq1

1577bp

PREDICTED:_mitochondrial_intermediate_peptidase_isoform_X2_[Bombyx_mori]

GO:0004222	F	metalloendopeptidase activity
GO:0005739	C	mitochondrion
GO:0005759	C	mitochondrial matrix
GO:0006508	P	proteolysis
GO:0006518	P	peptide metabolic process
GO:0006627	P	protein processing involved in protein targeting to mitochondrion
GO:0008233	F	peptidase activity
GO:0008237	F	metallopeptidase activity
GO:0016787	F	hydrolase activity
GO:0046872	F	metal ion binding