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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp12647_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		short-chain_dehydrogenase_[Danaus_plexippus]
Ontology
GO:0001523 P retinoid metabolic process
GO:0001917 C photoreceptor inner segment
GO:0004745 F NAD-retinol dehydrogenase activity
GO:0005622 C intracellular anatomical structure
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016062 P adaptation of rhodopsin mediated signaling
GO:0016491 F oxidoreductase activity
GO:0016616 F oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0042572 P retinol metabolic process
GO:0042574 P retinal metabolic process
GO:0052650 F NADP-retinol dehydrogenase activity
GO:0055114 P obsolete oxidation-reduction process
Transcript
Level		FPKM:6.31 TPM:5.85
ORF Entry
Sequence
(Nucleotide)
TTTTTTTTTTTATTTAAATTATTTATTTTAATGACTACACCTATTTTAAATGCGTAAATG
TAACAATTAATCAAATGAATCGCACATATTCACTTAGATCATTGAAATTAAAAGTAACAG
TCGAATGACTTCGGTGTCTTGTTCAAAAAATGCCTTTTTACACAACTACCCTCAATCAAT
CAATATATTTAAATCTGTCTCCTAATTCCGTGTGTCTTTGGAGATGGCTTGTTTATGCTC
GTCCAGCTTGGTCCACGCCTCGCTGACCCTCCACAGCCACTGCGCCAGCTCGAAGTCTTG
AGCTTCTTGTGATGGTTCAGCTTTCTTCATATCAACGTAATAGTCTCCGGCGCAGTCTTT
CAGCTTAGGGTCTAGGGCAGCGTGCACTATTGTCTGCCCTCCGATTTCGGGTTTCTTCAT
GAAGGGCCAGAACAGTGGGTATATGAAGAACCGAGTAACGCTTTTCATCATTGACATGTG
GCGGGTGATGTCCGTGTCTACGAGGCCAGGGTCTACTGCGATTGTCGCCACTCCAGTTCC
GAGTAACCTCCTGCCGAGCTCCCGCGCGAACAGTAGGTTGGCGAGCTTGCTCTGGCTGTA
GGCGGCGGACGCGTCATAGTTCTCGCTCATGTTGAGGTCGTGCTTGTGGATCCGCCCGCG
TTGGTGCGCGCTGCTCGACACCACCACCACGCGGCTCGGGGCTGAGGCCTTGAGCGTATC
CAGGAGCAAGTTTGTCAGCAAGAAATGTCCGAGGTGATTGACCCCGAGTTGGGTCTCGAA
GCCGTCCTTAGTGACTCCCTTGGGTGGTTCCATCACCCCGGCGTTATTGACCAGCACGTG
AAGGTGTGGCTCCTCTCCTTTGAATCTGGCAACGAACTCTCTGATGGAGGCCGTGCTGGC
CAGGTCGCAGGGTCTGCAGTACACGTATTTGTTGTTCGTCTCAAGCACGATGTCGCGTCG
TTGCTCCTCGCACTTCTTGACGTCACGGCACGCCATAAACACCTTAGCACCCCTTTTGGC
GAAGTCTTTTGCTGCAGCTTTCCCGATACCGCTGTTAGCACCAGTAATTATAATTGTTCT
GTTGTCGGCACGGACGGACCGGTCGTACGGAGGACCGCTGTAGTAATCTTTGAATATGCA
CACCCCACCAGCCACGGCCGCTACTGCAGTCACCAAAGTTACCGGCGTGCTGGGAACCCA
CATTTTCTGTTTTGCTGAATCGGAGACAGCGAGTGTGGCCAGCTGCTG
(1248 bp)

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