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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp12047_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_vacuolar_protein_sorting-associated_protein_35_isoform_X1_[Bombyx_mori]
Ontology
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005770 C late endosome
GO:0005829 C cytosol
GO:0006624 P vacuolar protein processing
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030904 C retromer complex
GO:0031647 P regulation of protein stability
GO:0042147 P retrograde transport, endosome to Golgi
GO:0045056 P transcytosis
GO:0061357 P positive regulation of Wnt protein secretion
GO:0070062 C extracellular exosome
GO:0090263 P positive regulation of canonical Wnt signaling pathway
GO:0097422 C tubular endosome
GO:0097481 C postsynaptic density
GO:1902823 P negative regulation of late endosome to lysosome transport
GO:1990126 P endocytic recycling
Transcript
Level		FPKM:4.96 TPM:4.59
ORF Entry
Sequence
(Nucleotide)
CTTCAGTTTACTAAAAATATGTTTTTTTCTATATACAGATCAAATTGCATATACCAATAT
ATCTTAAATAGTATGTATACTAAAATTGTATATATACTAATTGTAACACTCCTTTTGTCT
GATAAATAAATACAAAAAATTTAAGTGTTCGACATCTTAATTAAATGCTTTTCAAAAGCT
CACGATATTACGATAGAGTTATGGGCAAGATACTTTAACTGGTTTTCATCCAACAGTGTT
TCCACAACCCATATATAATATATTAGTTTTTCATTTCTCTATATAAATGTTATATTTATT
TTATCATTTATCATTTCATTAATACATCTTGATGATGTTTATTAGATACTAGTAGTTGAA
GGGTACTCACGTGAGCCTTTGACGCTCTATATCGCTCGTGTAGTATGTTTACGAGTGCTA
ACGCTCCCAACTACGTCATTAAGATAGATTGACAAGAACAAGTACCGGACCTCCCAGGGT
TAGGACAGCGTGAGACCCTCGTAGCCCAGACTCTCGGGGTCCGGAGACTCGATCCTGTTC
TTCAGATGCTGCAAAGTGTTGTGGAAGTGTTTCGTGATCTGCTCCACTTCTTCGGACTGA
TCTAAGTTGGCCAGCTCCTCGCGTATTTTCTGTATTATCGCGTCGATGAGGCTGGGCGTG
AGGCTCTGGTTGCCGCGCTCCCGCAGCAGCGCGTATCGGCCCAGCAGCTCGGCCAGCAGC
TGCGCCTGCACGCCGCCGTCCATGCACTGCTGGGCCACGCGGGCCGCCTTCTTCAGGCAG
TCCAGCGCGCGGGACGCGTCGTTCAGCGCCCACACCGGGCGGCCGTCCCTGGTCCCCTTC
CAGAAGAGATGCGAGCAGAGCGCCACGGCCCTGCTCTGGTCCGGCTTCTTCAGCAGCTTG
CTGGCCGCCAGCGCGCACTGGGTCCGCATCGGCTCCGCGTTCTCAGCGCCAAAACAATTG
ATCTGCTCGAAGGTGGCTATTATCAATGTTATTGCGGCCAGTTGCGCTTTGCTGTCGGAT
ATCTCGTCTTCGTATAGCGAGAAAGCTTGCGACAGGAACTCGTAAGCTATCGTTTCGTGA
TTGGCGAATCCTATTTCGCTTATCGCCAAAGCTCCCTGCAGGTACAACCTTAGAGGGAGT
TCGGCCAATTCCGCCTTCACGAGCATGGTGATGGTCTGGTGACAGAACTGGAATATCTTC
TGGCATTTCTTCTCCCACATCTCGTCCTGGTCTTTGAGGTCCTTATAAACGAAGGCCAGA
CGGTAGGCGTGGAACACCAGCGGCGGGAACGTGTGCTGGATCCTCCTCGCTCCGCCACCC
TGAAGGATCTTCCTCGCTGTGCTGGTTATCAGATACTGCTGGTCGGCGGAGTCCGATTTG
AAATGATGAATCAGTCTGGCCAACAAGCCCTGTTCTTCCACGAAGTCTTCAACGTCGCTT
TCAGAAGGCGGCTGATCCGGCTGGTCCTTCACCAGCACATCCAAGAGACCGAGGACAGCT
TCGACATCTTGCGGAGTGGATATTGCGGTGTTGGTCTCCAGCACGTCGTTGATGAGGTGG
ACGGCTATCATCACCCGACCCTGGTAGCTGAGGTGTCGTATCAGCGGCGCGTAATTAGAC
AACTTAATCAGCACCAATATGTTCTTGTAGTGGTCGCAGGGCAGCTTGATGATCTTCATC
AGTTCCTTGAAGACTGGCGTGTGGTGCTCCAACGTGGACTGGCCGCTGGACTGGTGTATG
TCAGTGCAGATCTTGTCCGTGTGAGCTAGAACCCGGTCCACATAGTTCAGCTTGTCCGGG
TGACATCGCTGAGCTAGCTTGAGCAGAGCGAGTTGGAGGCTCAGCATGTCTTCTTGGGGC
ATGTCGACCCTGCTCTGGGTGATCGCAGCAACTTGATCAGAGAAAACTTCGAACAGTTGA
ACTTCTTGTTCTTGTCCATCTTCCAGGACCACGCTTAGATTCATATTGCCTTCATTCCTC
TGGCTATACGAAGCGAGCCTCTCGATCAGTGCTATGATGATGTTCTTGATGTTGACTCCG
GGTTGGAGTTCAGCACACGACTTGAGGAACGGCTGCAAGTTGGCCAGGTGGAACTCGTCC
GGGAAAACCTGTATGATACACTCCATGAGGTACTCCTGCGCTATGGCGTCCCTGCAGCTC
ACCACCTGCTCCAGGATGCCGGGCAGCACCATCCTGCGGTAGTCCTCGACCGTGACGGAC
TCCAGTTGCGAGAGTCGAACCAAATTCGTGCCGACCAATATACGAAGCTCGGAGCGTTCA
CGTTCGCGGCGCTCTTTGTCTCTTGAGTGTCCCTGATGCTGCATCCTGACCCAGAGCTTG
TTCATTTCGGCGAAATTCATCAGGACAAAATCAACAGCGTCTCGCACGGTTCCATCGTTT
TCATTTGGGGCTTCGTGTGTGTCCGGTAAAACGTTCCTTGTGCACTGCAATAGGTAATTC
CTAAGGAAAAGTCCTCTCAAAGGATGCTGAACTCCACGACACATCTCAACCAAATCCTTC
AATAAATCTCTTCGCAGATTCGTGTTTGTTTTAATGTAGACCAGTCCTACTGTGATTAAC
AGGTACAATCTAGGTACAATGTTCCCAGCATATTGGACCAGTTCGTAAAGATCTGCAACC
TTCCTTCCCTTTTGGAACTCCTCCAGAAGATACAGCTCTAGGTGACGCAGTTCGTCTGTT
ATTGCCATATAAAGCTCATAATAGCTTTTTGGTGATAATAGTGAAGTTCTCAATTCACCC
AGCATTGTTGATGCATGTTTCAGGGCGTCCATTAATTTAGATTTGTCGAGACATCTTTTC
ATTTGAAATGCCTGAACTTTAACAATGTTCAAGGCCTCCTCCAGGAGTTTCTCCTGCTCT
TCGACTGGAGACACCTGGTTTGTCATTTGGGCTGTTGACCAAACATACAGAAATGGGTGG
CCTTTTCCCGCCATTTGTCGTTTTTAACGATGATATTGAGCTGTACGCATTTAGTAACGC
ACCTGAGTAACTAATCCGATGCAATTGAAAAACCAGATAAGGTTTTTTTGCAAATTCGAC
GAAAATTCGTAGGCGTTAACAATCACTCAACGAG
(3094 bp)

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