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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1651 A_BomaMG_comp118709_c0_seq1
829bp
FPKM:3.29 TPM:3.05
1652 A_BomaMG_comp11870_c0_seq1
483bp
FLJ37770-like_protein,_partial_[Acromyrmex_echinatior]
FPKM:2.25 TPM:2.08
1653 A_BomaMG_comp118714_c0_seq1
864bp
FPKM:2.48 TPM:2.30
1654 A_BomaMG_comp11871_c0_seq1
360bp
PREDICTED:_uncharacterized_protein_LOC106141610_[Amyelois_transitella]
FPKM:3.60 TPM:3.34
1655 A_BomaMG_comp11872_c0_seq1
1187bp
endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:1.92 TPM:1.78
1656 A_BomaMG_comp11873_c0_seq1
440bp
FPKM:2.36 TPM:2.19
1657 A_BomaMG_comp118746_c0_seq1
612bp
PREDICTED:_cleft_lip_and_palate_transmembrane_protein_1_homolog_[Bombyx_mori]
FPKM:2.20 TPM:2.04
1658 A_BomaMG_comp11874_c0_seq1
1078bp
FPKM:2.11 TPM:1.96
1659 A_BomaMG_comp11875_c0_seq1
637bp
FPKM:2.68 TPM:2.48
1660 A_BomaMG_comp11875_c1_seq1
214bp
FPKM:3.23 TPM:2.99
1661 A_BomaMG_comp11876_c0_seq1
342bp
FPKM:2.95 TPM:2.73
1662 A_BomaMG_comp11877_c0_seq1
1820bp
Thrombospondin_[Operophtera_brumata]
GO:0002020 F protease binding
GO:0003417 P growth plate cartilage development
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005518 F collagen binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005615 C extracellular space
GO:0006915 P apoptotic process
GO:0007155 P cell adhesion
GO:0008201 F heparin binding
GO:0031012 C extracellular matrix
GO:0043066 P negative regulation of apoptotic process
GO:0043395 F heparan sulfate proteoglycan binding
GO:0060173 P limb development
GO:0070062 C extracellular exosome
FPKM:1.67 TPM:1.55
1663 A_BomaMG_comp118785_c0_seq1
340bp
putative_RW1_protein_[Danaus_plexippus]
FPKM:4.48 TPM:4.15
1664 A_BomaMG_comp11878_c0_seq1
1707bp
PREDICTED:_inactive_rhomboid_protein_1,_partial_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0004252 F serine-type endopeptidase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0006508 P proteolysis
GO:0006810 P transport
GO:0008283 P cell population proliferation
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016477 P cell migration
GO:0016485 P protein processing
GO:0019838 F growth factor binding
GO:0042058 P regulation of epidermal growth factor receptor signaling pathway
GO:0050708 P regulation of protein secretion
GO:0050709 P negative regulation of protein secretion
GO:0061136 P regulation of proteasomal protein catabolic process
FPKM:2.55 TPM:2.36
1665 A_BomaMG_comp118794_c0_seq1
473bp
PREDICTED:_uncharacterized_protein_LOC100500745_[Bombyx_mori]
FPKM:3.72 TPM:3.45
1666 A_BomaMG_comp118795_c0_seq1
691bp
PREDICTED:_ras-related_protein_Rab-23-like_[Bombyx_mori]
GO:0000045 P autophagosome assembly
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005776 C autophagosome
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006913 P nucleocytoplasmic transport
GO:0006968 P cellular defense response
GO:0007165 P signal transduction
GO:0007264 P small GTPase mediated signal transduction
GO:0007275 P multicellular organism development
GO:0008152 P metabolic process
GO:0010008 C endosome membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0030670 C phagocytic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0042384 P cilium assembly
GO:0042992 P obsolete negative regulation of transcription factor import into nucleus
GO:0045335 C phagocytic vesicle
GO:0070062 C extracellular exosome
GO:0097094 P craniofacial suture morphogenesis
FPKM:3.92 TPM:3.63
1667 A_BomaMG_comp11879_c0_seq1
423bp
FPKM:2.39 TPM:2.21
1668 A_BomaMG_comp1187_c0_seq1
524bp
PREDICTED:_zonadhesin-like_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005737 C cytoplasm
GO:0007155 P cell adhesion
GO:0008150 P biological_process
FPKM:1.19 TPM:1.10
1669 A_BomaMG_comp11880_c0_seq1
685bp
Protein_fat-free-like_protein_[Operophtera_brumata]
GO:0000938 C GARP complex
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0006914 P autophagy
GO:0015031 P protein transport
GO:0032456 P endocytic recycling
GO:0042147 P retrograde transport, endosome to Golgi
GO:0055037 C recycling endosome
GO:1990745 C EARP complex
FPKM:3.09 TPM:2.87
1670 A_BomaMG_comp11880_c1_seq1
1713bp
Protein_fat-free-like_protein_[Operophtera_brumata]
GO:0000938 C GARP complex
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0032456 P endocytic recycling
FPKM:2.61 TPM:2.41
1671 A_BomaMG_comp11881_c0_seq1
333bp
hypothetical_protein_[Vibrio_owensii]
FPKM:4.28 TPM:3.97
1672 A_BomaMG_comp118823_c0_seq1
445bp
FPKM:2.57 TPM:2.38
1673 A_BomaMG_comp118827_c0_seq1
490bp
FPKM:2.42 TPM:2.24
1674 A_BomaMG_comp11882_c0_seq1
791bp
PREDICTED:_ATP-binding_cassette_sub-family_A_member_3-like_[Bombyx_mori]
FPKM:3.06 TPM:2.83
1675 A_BomaMG_comp118846_c0_seq1
564bp
Insect_intestinal_mucin_3_[Operophtera_brumata]
FPKM:3.72 TPM:3.45
1676 A_BomaMG_comp11884_c0_seq1
513bp
FPKM:1.83 TPM:1.69
1677 A_BomaMG_comp118865_c0_seq1
1427bp
FPKM:2.56 TPM:2.37
1678 A_BomaMG_comp118871_c0_seq1
332bp
FPKM:3.59 TPM:3.32
1679 A_BomaMG_comp11887_c0_seq1
1417bp
male-specific_lethal_3_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006338 P chromatin remodeling
GO:0006342 P heterochromatin assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016568 P chromatin organization
GO:0016575 P histone deacetylation
GO:0035064 F methylated histone binding
GO:0035267 C NuA4 histone acetyltransferase complex
GO:0043967 P histone H4 acetylation
GO:0043968 P histone H2A acetylation
GO:0043984 P histone H4-K16 acetylation
GO:0072487 C MSL complex
FPKM:1.51 TPM:1.39
1680 A_BomaMG_comp11887_c0_seq2
1441bp
PREDICTED:_male-specific_lethal_3_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006338 P chromatin remodeling
GO:0006342 P heterochromatin assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016568 P chromatin organization
GO:0016575 P histone deacetylation
GO:0035064 F methylated histone binding
GO:0035267 C NuA4 histone acetyltransferase complex
GO:0043967 P histone H4 acetylation
GO:0043968 P histone H2A acetylation
GO:0043984 P histone H4-K16 acetylation
GO:0072487 C MSL complex
FPKM:0.54 TPM:0.50
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