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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp11877_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		Thrombospondin_[Operophtera_brumata]
Ontology
GO:0002020 F protease binding
GO:0003417 P growth plate cartilage development
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005518 F collagen binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005615 C extracellular space
GO:0006915 P apoptotic process
GO:0007155 P cell adhesion
GO:0008201 F heparin binding
GO:0031012 C extracellular matrix
GO:0043066 P negative regulation of apoptotic process
GO:0043395 F heparan sulfate proteoglycan binding
GO:0060173 P limb development
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:1.67 TPM:1.55
ORF Entry
Sequence
(Nucleotide)
AATTATAAAAAATGTTAATCGACACGTCCGTTCGTCTGTGGCTACTCGTTTGTGAAATAA
TCTTGGTCGATTTCGAAATGGTTCCTTGTTGAAATCTCCGAAGCTATGCTCGCCGGAATC
TTATCATTACATTTGTAGAGTAGATTAGACCATATGATCATTTCCTGGGAGAAGCAGAAC
ACTCCGAGCCTCCCCCCCTTCAGGGTGAAGTCGTAGGTGTTCCCAGAGTCCGCGACCAGG
CGGTTGTTCTCGTACATCTTCAGTCTGATGAGACCGATCTTGGGGCGGTGGAGGAGCTTC
CAGCGGTACGCCGTCTGCTCGCGCCAGCCCACGTTGCGAGGGTCTTTCCAGAGCAAAGTC
ACCTGATCCGGGGTAGAGTTAGTATTCCAGAGAGCGTTCCTGAGTATCTTCCCCGGGCCA
GTCTTCGAGTTGACCAGCTTGAGCTGTATGCCGTTCTCGGCGACCGCTCTGAACGGAGTC
TTCTGCCAATAAGTCTGTTTATCCTTCTTCCACATGACCACATAAAACCTCTTGTTGCTT
TGGTATCCAAAAATGAATCCAACATAATCGTCGTCTATCTTTGTGTTGACGAAGATGGTT
CCCTCGTAGTCGACTCCGCCGAAGCTGTCGAAGCCGACTGCCAGACCAGGGTCCGAGTTC
AGGGTCTGCAGGATCTCAGCTCCGTTGTCCGTCACCCTCCAGTTGGGCTCCTGTTGCGAC
TCGCCTTCAGGGTCCAATCGGACCGTGGTGAACTGTCTGAAGTCCGTTCGAAATATCTGC
GAATTGTTCGGGCAGTTGTCCAGCTCGTTGATGACCCGGTCGCCGTCATTGTCATTGTCA
CAGGCGTCTCCAATGCCGTCATTATCAGAGTCCTTTTGATCCCTATTGGGCACGATCTGG
CAGTTGTCGTCAAGATCTGGTATCCCGTCTCCGTCGTCGTCGTCGTCACAGACGTCGCCC
TTGTCGTCGCGGTCCACGTCCTGCTGGTCGCTGTTCGGTATCAGCGGGCAGTTGTCTAGG
CCATCTTGTATCCCGTCTTGGTCACGGTCTATATCGCTGTCGCACGCGTCGCCGACGTTG
TCCTTGTCCGTGTCCTCTTGGTTCGTGTTGCGGACGCGGGGACAGTTGTCGCAGACGTCG
CCGACGCCGTCCGAGTCCATGTCGTCTTGCTGCGGGTTGTACTTCCTGGGGCAGTTGTCC
ACTTGGTTCGGTATGCCGTCATCGTCCATGTCCGAATCACAGACGTCTCCCGTTCCGTCT
CCGTCGGTGTCCTCCTGGCGAGGGTTGTAGTGCCGGGGACAGTTGTCACAGGCGTTTCCT
CTCTCGTCCGATTTGTTCTCGTCGTCGTCCAACTGGTCCGGGTTGGGGGTCAATGGGCAG
TTGTCAGGAAAATTGGGAATCCCGTCTCCGTCTGCATCAGAATCGCACGAGTCCCCGATA
CCGTCACCGTCCACGTCCTCTTGTCCGGAGTTGGAGACGTCGGGGCAGTTGTCCTTCTTG
CAGTGAGGCTCATTACAAGGCAGCTGCTCGTCCGGATGTCCGTCTAGATCTCGGTCCAGT
CCGCACACTGTACCGTTGCCAGTCCAACCGGTATTACAAACGCACTTTTGTCCGAAACCA
CAGACGGCGTTGAATCGCCTGCAGTAGCTGGGGTCGCATCGCTTCACCAGCGAGTCGGGG
TCGAAGCACGGCCTCGTCGTGTTCACGTAGTAGTGGCCGCCGCAGGGCACGCAGATGTAT
GAGCCCGGGGTATTGACGCAAAGCCGTCCTCTTGGACAGTTGGCTCGTCCGTCAGCGCAC
TCGTCCACATCCACGCAATG
(1820 bp)

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