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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1621 A_BomaMG_comp118490_c0_seq1
258bp
hypothetical_protein_OIDMADRAFT_53391_[Oidiodendron_maius_Zn]
FPKM:0.42 TPM:0.39
1622 A_BomaMG_comp11849_c0_seq1
1077bp
PREDICTED:_ecto-NOX_disulfide-thiol_exchanger_2_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0048511 P rhythmic process
GO:0055114 P obsolete oxidation-reduction process
FPKM:2.00 TPM:1.85
1623 A_BomaMG_comp1184_c0_seq1
315bp
PREDICTED:_transposable_element_Tcb1_transposase_[Amyelois_transitella]
FPKM:1.26 TPM:1.17
1624 A_BomaMG_comp11850_c0_seq1
1193bp
PREDICTED:_uncharacterized_protein_LOC106136556_isoform_X2_[Amyelois_transitella]
FPKM:1.91 TPM:1.77
1625 A_BomaMG_comp118529_c0_seq1
465bp
PREDICTED:_Krueppel-like_factor_7_isoform_X2_[Papilio_machaon]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0019221 P cytokine-mediated signaling pathway
GO:0046872 F metal ion binding
FPKM:2.63 TPM:2.44
1626 A_BomaMG_comp11852_c0_seq1
304bp
reverse_transcriptase_[Bombyx_mori]
FPKM:1.10 TPM:1.01
1627 A_BomaMG_comp11852_c1_seq1
257bp
reverse_transcriptase_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:1.71 TPM:1.58
1628 A_BomaMG_comp11853_c0_seq1
333bp
FPKM:2.67 TPM:2.48
1629 A_BomaMG_comp118540_c0_seq1
774bp
PREDICTED:_uncharacterized_protein_LOC101743391_[Bombyx_mori]
FPKM:2.63 TPM:2.43
1630 A_BomaMG_comp11854_c0_seq1
328bp
FPKM:2.53 TPM:2.35
1631 A_BomaMG_comp118551_c0_seq1
626bp
PREDICTED:_LOW_QUALITY_PROTEIN:_rho_guanine_nucleotide_exchange_factor_11_[Bombyx_mori]
GO:0000910 P cytokinesis
GO:0001558 P regulation of cell growth
GO:0001664 F G protein-coupled receptor binding
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006928 P movement of cell or subcellular component
GO:0006941 P striated muscle contraction
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007266 P Rho protein signal transduction
GO:0016020 C membrane
GO:0030010 P establishment of cell polarity
GO:0030036 P actin cytoskeleton organization
GO:0035023 P regulation of Rho protein signal transduction
GO:0043065 P positive regulation of apoptotic process
GO:0043547 P positive regulation of GTPase activity
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0051056 P regulation of small GTPase mediated signal transduction
FPKM:2.74 TPM:2.54
1632 A_BomaMG_comp11855_c0_seq1
565bp
PREDICTED:_uncharacterized_protein_LOC101746000_isoform_X3_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0016787 F hydrolase activity
GO:0042802 F identical protein binding
FPKM:3.36 TPM:3.11
1633 A_BomaMG_comp11857_c0_seq1
1005bp
FPKM:2.38 TPM:2.21
1634 A_BomaMG_comp118588_c0_seq1
696bp
FPKM:2.83 TPM:2.62
1635 A_BomaMG_comp11859_c0_seq1
279bp
FPKM:6.12 TPM:5.66
1636 A_BomaMG_comp1185_c0_seq1
376bp
Sodium-coupled_monocarboxylate_transporter_2_[Papilio_xuthus]
FPKM:1.74 TPM:1.61
1637 A_BomaMG_comp1185_c1_seq1
324bp
PREDICTED:_sodium-coupled_monocarboxylate_transporter_2-like_[Amyelois_transitella]
FPKM:1.66 TPM:1.53
1638 A_BomaMG_comp118602_c0_seq1
1041bp
PREDICTED:_periodic_tryptophan_protein_1_homolog_[Amyelois_transitella]
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005794 C Golgi apparatus
GO:0006351 P transcription, DNA-templated
FPKM:3.03 TPM:2.81
1639 A_BomaMG_comp11860_c0_seq1
519bp
FPKM:2.81 TPM:2.60
1640 A_BomaMG_comp11861_c0_seq1
686bp
FPKM:2.22 TPM:2.05
1641 A_BomaMG_comp11862_c0_seq1
394bp
PREDICTED:_LOW_QUALITY_PROTEIN:_translational_activator_GCN1_[Bombyx_mori]
FPKM:4.15 TPM:3.84
1642 A_BomaMG_comp11863_c0_seq1
385bp
FPKM:4.16 TPM:3.85
1643 A_BomaMG_comp11865_c0_seq1
545bp
FPKM:1.86 TPM:1.73
1644 A_BomaMG_comp118670_c0_seq1
258bp
endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:3.38 TPM:3.13
1645 A_BomaMG_comp118673_c0_seq1
397bp
PREDICTED:_WD_repeat-containing_protein_74_[Bombyx_mori]
FPKM:3.93 TPM:3.64
1646 A_BomaMG_comp118686_c0_seq1
208bp
FPKM:0.91 TPM:0.84
1647 A_BomaMG_comp11868_c0_seq1
1626bp
PREDICTED:_putative_inorganic_phosphate_cotransporter_[Bombyx_mori]
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006814 P sodium ion transport
GO:0006820 P anion transport
GO:0015114 F phosphate ion transmembrane transporter activity
GO:0015293 F symporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0035435 P phosphate ion transmembrane transport
GO:0055085 P transmembrane transport
FPKM:2.72 TPM:2.52
1648 A_BomaMG_comp118693_c0_seq1
396bp
FPKM:1.90 TPM:1.76
1649 A_BomaMG_comp1186_c0_seq1
441bp
FPKM:1.05 TPM:0.97
1650 A_BomaMG_comp118702_c0_seq1
1794bp
FPKM:2.39 TPM:2.21
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