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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
3901 A_SariASG_c16709_g1_i1
235bp
unnamed_protein_product,_partial_[Mus_musculus]
GO:0003676 F nucleic acid binding
GO:0004674 F protein serine/threonine kinase activity
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0007089 P traversing start control point of mitotic cell cycle
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
FPKM:2.21 TPM:2.14
3902 A_SariASG_c1670_g1_i1
430bp
FPKM:2.69 TPM:2.60
3903 A_SariASG_c16710_g1_i1
266bp
FPKM:2.04 TPM:1.97
3904 A_SariASG_c16711_g1_i1
352bp
FPKM:1.40 TPM:1.36
3905 A_SariASG_c16714_g1_i1
305bp
FPKM:4.58 TPM:4.43
3906 A_SariASG_c16715_g1_i1
329bp
E3_ubiquitin-protein_ligase_NEDD4_isoform_X2_[Meriones_unguiculatus]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000151 C ubiquitin ligase complex
GO:0000785 C chromatin
GO:0002250 P adaptive immune response
GO:0003151 P outflow tract morphogenesis
GO:0003197 P endocardial cushion development
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005902 C microvillus
GO:0005938 C cell cortex
GO:0006513 P protein monoubiquitination
GO:0006622 P protein targeting to lysosome
GO:0006955 P immune response
GO:0007041 P lysosomal transport
GO:0007399 P nervous system development
GO:0007528 P neuromuscular junction development
GO:0008022 F protein C-terminus binding
GO:0010766 P negative regulation of sodium ion transport
GO:0010768 P negative regulation of transcription from RNA polymerase II promoter in response to UV-induced DNA damage
GO:0014068 P positive regulation of phosphatidylinositol 3-kinase signaling
GO:0014894 P response to denervation involved in regulation of muscle adaptation
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0019089 P obsolete transmission of virus
GO:0019871 F sodium channel inhibitor activity
GO:0019904 F protein domain specific binding
GO:0030948 P negative regulation of vascular endothelial growth factor receptor signaling pathway
GO:0031175 P neuron projection development
GO:0031623 P receptor internalization
GO:0031698 F beta-2 adrenergic receptor binding
GO:0032801 P receptor catabolic process
GO:0034644 P cellular response to UV
GO:0034765 P regulation of ion transmembrane transport
GO:0035255 F ionotropic glutamate receptor binding
GO:0042110 P T cell activation
GO:0042391 P regulation of membrane potential
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0042921 P glucocorticoid receptor signaling pathway
GO:0043130 F ubiquitin binding
GO:0043162 P ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway
GO:0044111 P formation of structure involved in a symbiotic process
GO:0045121 C membrane raft
GO:0045732 P positive regulation of protein catabolic process
GO:0046824 P positive regulation of nucleocytoplasmic transport
GO:0048471 C perinuclear region of cytoplasm
GO:0048514 P blood vessel morphogenesis
GO:0048814 P regulation of dendrite morphogenesis
GO:0050807 P regulation of synapse organization
GO:0050815 F phosphoserine residue binding
GO:0050816 F phosphothreonine residue binding
GO:0050847 P progesterone receptor signaling pathway
GO:0061630 F ubiquitin protein ligase activity
GO:0070062 C extracellular exosome
GO:0070063 F RNA polymerase binding
GO:0070064 F proline-rich region binding
GO:0070534 P protein K63-linked ubiquitination
GO:1901016 P regulation of potassium ion transmembrane transporter activity
GO:2000650 P negative regulation of sodium ion transmembrane transporter activity
FPKM:0.79 TPM:0.77
3907 A_SariASG_c16719_g1_i1
1730bp
translation_initiation_factor_eIF-2B_subunit_gamma_[Helicoverpa_armigera]
GO:0003743 F translation initiation factor activity
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005737 C cytoplasm
GO:0005851 C eukaryotic translation initiation factor 2B complex
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0008135 F translation factor activity, RNA binding
GO:0009058 P biosynthetic process
GO:0009408 P response to heat
GO:0009749 P response to glucose
GO:0014003 P oligodendrocyte development
GO:0016779 F nucleotidyltransferase activity
GO:0021766 P hippocampus development
GO:0043434 P response to peptide hormone
GO:0043547 P positive regulation of GTPase activity
GO:0051716 P cellular response to stimulus
FPKM:33.95 TPM:32.87
3908 A_SariASG_c16719_g1_i2
1777bp
translation_initiation_factor_eIF-2B_subunit_gamma_[Helicoverpa_armigera]
GO:0003743 F translation initiation factor activity
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005737 C cytoplasm
GO:0005851 C eukaryotic translation initiation factor 2B complex
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0008135 F translation factor activity, RNA binding
GO:0009058 P biosynthetic process
GO:0009408 P response to heat
GO:0009749 P response to glucose
GO:0014003 P oligodendrocyte development
GO:0016779 F nucleotidyltransferase activity
GO:0021766 P hippocampus development
GO:0043434 P response to peptide hormone
GO:0043547 P positive regulation of GTPase activity
GO:0051716 P cellular response to stimulus
FPKM:11.19 TPM:10.83
3909 A_SariASG_c16720_g1_i1
545bp
FPKM:15.44 TPM:14.96
3910 A_SariASG_c16722_g1_i1
226bp
FPKM:1.23 TPM:1.19
3911 A_SariASG_c16723_g1_i1
727bp
high_mobility_group_protein_B2_[Mus_musculus]
GO:0000790 C chromatin
GO:0000793 C condensed chromosome
GO:0001158 F cis-regulatory region sequence-specific DNA binding
GO:0001938 P positive regulation of endothelial cell proliferation
GO:0002376 P immune system process
GO:0002437 P inflammatory response to antigenic stimulus
GO:0003677 F DNA binding
GO:0003684 F damaged DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005623 C obsolete cell
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006265 P DNA topological change
GO:0006310 P DNA recombination
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006935 P chemotaxis
GO:0006954 P inflammatory response
GO:0007283 P spermatogenesis
GO:0007289 P spermatid nucleus differentiation
GO:0008134 F transcription factor binding
GO:0008301 F DNA binding, bending
GO:0008584 P male gonad development
GO:0010628 P positive regulation of gene expression
GO:0010629 P negative regulation of gene expression
GO:0019904 F protein domain specific binding
GO:0032075 P positive regulation of nuclease activity
GO:0032496 P response to lipopolysaccharide
GO:0032728 P positive regulation of interferon-beta production
GO:0042056 F chemoattractant activity
GO:0043234 C protein-containing complex
GO:0043388 P positive regulation of DNA binding
GO:0044212 F transcription cis-regulatory region binding
GO:0044378 F non-sequence-specific DNA binding, bending
GO:0044822 F RNA binding
GO:0045087 P innate immune response
GO:0045089 P positive regulation of innate immune response
GO:0045595 P regulation of cell differentiation
GO:0045648 P positive regulation of erythrocyte differentiation
GO:0045654 P positive regulation of megakaryocyte differentiation
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048471 C perinuclear region of cytoplasm
GO:0048545 P response to steroid hormone
GO:0050767 P regulation of neurogenesis
GO:0050786 F RAGE receptor binding
GO:0050829 P defense response to Gram-negative bacterium
GO:0050830 P defense response to Gram-positive bacterium
GO:0050918 P positive chemotaxis
GO:0060326 P cell chemotaxis
GO:0071222 P cellular response to lipopolysaccharide
GO:0072091 P regulation of stem cell proliferation
GO:0097100 F supercoiled DNA binding
GO:1902042 P negative regulation of extrinsic apoptotic signaling pathway via death domain receptors
FPKM:1.45 TPM:1.41
3912 A_SariASG_c16723_g1_i2
256bp
HMGB2,_partial_[Cervus_elaphus_hippelaphus]
GO:0000400 F four-way junction DNA binding
GO:0000790 C chromatin
GO:0000793 C condensed chromosome
GO:0001158 F cis-regulatory region sequence-specific DNA binding
GO:0001938 P positive regulation of endothelial cell proliferation
GO:0002376 P immune system process
GO:0002437 P inflammatory response to antigenic stimulus
GO:0003677 F DNA binding
GO:0003684 F damaged DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005623 C obsolete cell
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006265 P DNA topological change
GO:0006309 P apoptotic DNA fragmentation
GO:0006310 P DNA recombination
GO:0006325 P chromatin organization
GO:0006334 P nucleosome assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006935 P chemotaxis
GO:0006954 P inflammatory response
GO:0007283 P spermatogenesis
GO:0007289 P spermatid nucleus differentiation
GO:0008134 F transcription factor binding
GO:0008144 F obsolete drug binding
GO:0008301 F DNA binding, bending
GO:0008584 P male gonad development
GO:0010628 P positive regulation of gene expression
GO:0010629 P negative regulation of gene expression
GO:0019904 F protein domain specific binding
GO:0032075 P positive regulation of nuclease activity
GO:0032392 P DNA geometric change
GO:0032496 P response to lipopolysaccharide
GO:0032728 P positive regulation of interferon-beta production
GO:0033151 P V(D)J recombination
GO:0042056 F chemoattractant activity
GO:0042493 P response to xenobiotic stimulus
GO:0043234 C protein-containing complex
GO:0043388 P positive regulation of DNA binding
GO:0044212 F transcription cis-regulatory region binding
GO:0044378 F non-sequence-specific DNA binding, bending
GO:0044822 F RNA binding
GO:0045087 P innate immune response
GO:0045089 P positive regulation of innate immune response
GO:0045595 P regulation of cell differentiation
GO:0045648 P positive regulation of erythrocyte differentiation
GO:0045654 P positive regulation of megakaryocyte differentiation
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048471 C perinuclear region of cytoplasm
GO:0048545 P response to steroid hormone
GO:0050767 P regulation of neurogenesis
GO:0050786 F RAGE receptor binding
GO:0050829 P defense response to Gram-negative bacterium
GO:0050830 P defense response to Gram-positive bacterium
GO:0050918 P positive chemotaxis
GO:0051103 P DNA ligation involved in DNA repair
GO:0060326 P cell chemotaxis
GO:0071222 P cellular response to lipopolysaccharide
GO:0072091 P regulation of stem cell proliferation
GO:0097100 F supercoiled DNA binding
GO:1902042 P negative regulation of extrinsic apoptotic signaling pathway via death domain receptors
FPKM:2.29 TPM:2.21
3913 A_SariASG_c16724_g1_i1
243bp
Cell_division_cycle_protein_20-like_[Papilio_machaon]
FPKM:3.54 TPM:3.43
3914 A_SariASG_c16727_g1_i1
214bp
PREDICTED:_uncharacterized_protein_LOC106709987_[Papilio_machaon]
FPKM:2.87 TPM:2.78
3915 A_SariASG_c16728_g1_i1
541bp
FPKM:4.32 TPM:4.18
3916 A_SariASG_c16729_g1_i1
1731bp
PREDICTED:_uncharacterized_oxidoreductase_YtbE-like_[Amyelois_transitella]
GO:0004033 F aldo-keto reductase (NADP) activity
GO:0008106 F alcohol dehydrogenase (NADP+) activity
GO:0009409 P response to cold
GO:0009414 P response to water deprivation
GO:0009507 C chloroplast
GO:0009636 P response to toxic substance
GO:0009651 P response to salt stress
GO:0016229 F steroid dehydrogenase activity
GO:0016491 F oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0070401 F NADP+ binding
FPKM:19.42 TPM:18.81
3917 A_SariASG_c16730_g1_i1
439bp
FPKM:1.79 TPM:1.73
3918 A_SariASG_c16733_g1_i1
310bp
signal-induced_proliferation-associated_1-like_protein_1_[Helicoverpa_armigera]
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0043547 P positive regulation of GTPase activity
GO:0051056 P regulation of small GTPase mediated signal transduction
FPKM:3.55 TPM:3.43
3919 A_SariASG_c16734_g1_i1
519bp
FPKM:4.70 TPM:4.55
3920 A_SariASG_c16735_g1_i1
369bp
FPKM:4.09 TPM:3.96
3921 A_SariASG_c16736_g1_i1
259bp
FPKM:2.60 TPM:2.52
3922 A_SariASG_c16737_g1_i1
6214bp
clathrin_heavy_chain_[Bombyx_mori]
GO:0005198 F structural molecule activity
GO:0005515 F protein binding
GO:0005802 C trans-Golgi network
GO:0005811 C lipid droplet
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005905 C clathrin-coated pit
GO:0005938 C cell cortex
GO:0006886 P intracellular protein transport
GO:0006897 P endocytosis
GO:0007268 P chemical synaptic transmission
GO:0007269 P neurotransmitter secretion
GO:0007291 P sperm individualization
GO:0007594 P puparial adhesion
GO:0008021 C synaptic vesicle
GO:0008103 P oocyte microtubule cytoskeleton polarization
GO:0016020 C membrane
GO:0016079 P synaptic vesicle exocytosis
GO:0016183 P synaptic vesicle coating
GO:0016192 P vesicle-mediated transport
GO:0030125 C clathrin vesicle coat
GO:0030129 C clathrin coat of synaptic vesicle
GO:0030130 C clathrin coat of trans-Golgi network vesicle
GO:0030132 C clathrin coat of coated pit
GO:0030135 C coated vesicle
GO:0030136 C clathrin-coated vesicle
GO:0030141 C secretory granule
GO:0030198 P extracellular matrix organization
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0032051 F clathrin light chain binding
GO:0033227 P dsRNA transport
GO:0033363 P secretory granule organization
GO:0035002 P liquid clearance, open tracheal system
GO:0035159 P regulation of tube length, open tracheal system
GO:0040008 P regulation of growth
GO:0045451 P pole plasm oskar mRNA localization
GO:0045747 P positive regulation of Notch signaling pathway
GO:0045807 P positive regulation of endocytosis
GO:0046667 P compound eye retinal cell programmed cell death
GO:0048471 C perinuclear region of cytoplasm
GO:0048749 P compound eye development
GO:0071439 C clathrin complex
FPKM:109.51 TPM:106.05
3923 A_SariASG_c16738_g1_i1
309bp
FPKM:4.46 TPM:4.32
3924 A_SariASG_c16739_g1_i1
986bp
dnaJ_(Hsp40)_homolog_10_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
FPKM:0.00 TPM:0.00
3925 A_SariASG_c16739_g1_i2
1229bp
dnaJ_(Hsp40)_homolog_10_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
FPKM:30.51 TPM:29.55
3926 A_SariASG_c16740_g1_i1
650bp
FPKM:3.19 TPM:3.09
3927 A_SariASG_c16741_g1_i1
306bp
FPKM:7.58 TPM:7.34
3928 A_SariASG_c16742_g1_i1
655bp
BTB/POZ_domain-containing_protein_6-A-like_[Helicoverpa_armigera]
GO:0005634 C nucleus
GO:0016567 P protein ubiquitination
GO:0031397 P negative regulation of protein ubiquitination
GO:0031463 C Cul3-RING ubiquitin ligase complex
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
FPKM:13.92 TPM:13.48
3929 A_SariASG_c16743_g1_i1
230bp
FPKM:9.35 TPM:9.06
3930 A_SariASG_c16745_g1_i1
820bp
FPKM:1.40 TPM:1.35
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