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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
3871 A_SariASG_c16671_g1_i1
641bp
tripartite_motif-containing_protein_2_isoform_X2_[Bombyx_mori]
FPKM:3.44 TPM:3.33
3872 A_SariASG_c16672_g1_i1
2046bp
NHL_repeat-containing_protein_2_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
FPKM:0.00 TPM:0.00
3873 A_SariASG_c16672_g1_i2
2529bp
NHL_repeat-containing_protein_2_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
FPKM:37.42 TPM:36.24
3874 A_SariASG_c16673_g1_i1
698bp
FPKM:13.59 TPM:13.16
3875 A_SariASG_c16673_g1_i2
234bp
FPKM:0.00 TPM:0.00
3876 A_SariASG_c16676_g1_i1
2028bp
PREDICTED:_proliferation-associated_protein_2G4_[Amyelois_transitella]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006364 P rRNA processing
GO:0006417 P regulation of translation
GO:0007050 P regulation of cell cycle
GO:0008283 P cell population proliferation
GO:0016020 C membrane
GO:0030529 C ribonucleoprotein complex
GO:0031625 F ubiquitin protein ligase binding
GO:0043066 P negative regulation of apoptotic process
GO:0044822 F RNA binding
GO:0045597 P positive regulation of cell differentiation
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0070062 C extracellular exosome
FPKM:115.58 TPM:111.92
3877 A_SariASG_c16678_g1_i1
1633bp
PREDICTED:_Krueppel_homolog_2_[Amyelois_transitella]
GO:0005643 C nuclear pore
GO:0005783 C endoplasmic reticulum
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0017056 F structural constituent of nuclear pore
GO:0034613 P cellular protein localization
GO:0051292 P nuclear pore complex assembly
GO:0071786 P endoplasmic reticulum tubular network organization
FPKM:80.09 TPM:77.56
3878 A_SariASG_c16678_g1_i2
1680bp
PREDICTED:_Krueppel_homolog_2_[Amyelois_transitella]
GO:0005643 C nuclear pore
GO:0005783 C endoplasmic reticulum
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0017056 F structural constituent of nuclear pore
GO:0034613 P cellular protein localization
GO:0051292 P nuclear pore complex assembly
GO:0071786 P endoplasmic reticulum tubular network organization
FPKM:27.75 TPM:26.88
3879 A_SariASG_c16678_g2_i1
231bp
PREDICTED:_Krueppel_homolog_2_[Amyelois_transitella]
FPKM:1.16 TPM:1.12
3880 A_SariASG_c16680_g1_i1
511bp
centrosomal_protein_of_164_kDa_isoform_X1_[Helicoverpa_armigera]
FPKM:0.91 TPM:0.88
3881 A_SariASG_c16681_g1_i1
336bp
FPKM:1.02 TPM:0.98
3882 A_SariASG_c16683_g1_i1
379bp
FPKM:2.88 TPM:2.79
3883 A_SariASG_c16684_g1_i1
771bp
FPKM:16.74 TPM:16.21
3884 A_SariASG_c16685_g1_i1
310bp
FPKM:1.77 TPM:1.72
3885 A_SariASG_c16687_g1_i1
899bp
PREDICTED:_mediator_of_RNA_polymerase_II_transcription_subunit_18_[Amyelois_transitella]
GO:0001104 F transcription coregulator activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0016592 C mediator complex
FPKM:24.68 TPM:23.90
3886 A_SariASG_c16688_g1_i1
215bp
FPKM:6.37 TPM:6.16
3887 A_SariASG_c16690_g1_i1
588bp
FPKM:3.43 TPM:3.32
3888 A_SariASG_c16691_g1_i1
1551bp
FPKM:42.79 TPM:41.44
3889 A_SariASG_c16696_g1_i1
487bp
FPKM:19.23 TPM:18.63
3890 A_SariASG_c16696_g2_i1
226bp
FPKM:36.18 TPM:35.03
3891 A_SariASG_c16698_g1_i1
1149bp
synaptosomal-associated_protein_25_isoform_X3_[Bombyx_mori]
GO:0000149 F SNARE binding
GO:0005484 F SNAP receptor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006893 P Golgi to plasma membrane transport
GO:0006906 P vesicle fusion
GO:0007268 P chemical synaptic transmission
GO:0007269 P neurotransmitter secretion
GO:0007274 P neuromuscular synaptic transmission
GO:0016020 C membrane
GO:0016081 P synaptic vesicle docking
GO:0016082 P synaptic vesicle priming
GO:0016192 P vesicle-mediated transport
GO:0019905 F syntaxin binding
GO:0030054 C cell junction
GO:0031083 C BLOC-1 complex
GO:0031201 C SNARE complex
GO:0031629 P synaptic vesicle fusion to presynaptic active zone membrane
GO:0043005 C neuron projection
GO:0043195 C terminal bouton
GO:0045202 C synapse
GO:0048172 P regulation of short-term neuronal synaptic plasticity
GO:0048489 P synaptic vesicle transport
FPKM:53.42 TPM:51.74
3892 A_SariASG_c16699_g1_i1
217bp
FPKM:0.69 TPM:0.67
3893 A_SariASG_c16701_g1_i1
254bp
FPKM:0.91 TPM:0.88
3894 A_SariASG_c16703_g1_i1
378bp
FPKM:2.69 TPM:2.60
3895 A_SariASG_c16705_g1_i1
286bp
Uncharacterized_protein_OBRU01_01363_[Operophtera_brumata]
GO:0001501 P skeletal system development
GO:0005201 F extracellular matrix structural constituent
GO:0005509 F calcium ion binding
GO:0005540 F hyaluronic acid binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0007155 P cell adhesion
GO:0007417 P central nervous system development
GO:0030246 F carbohydrate binding
FPKM:3.13 TPM:3.03
3896 A_SariASG_c16706_g1_i1
320bp
FPKM:580.38 TPM:562.04
3897 A_SariASG_c16706_g2_i1
2600bp
sodium-independent_sulfate_anion_transporter_[Bombyx_mori]
GO:0005254 F chloride channel activity
GO:0005654 C nucleoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0008271 F secondary active sulfate transmembrane transporter activity
GO:0008272 P sulfate transport
GO:0008509 F anion transmembrane transporter activity
GO:0015106 F bicarbonate transmembrane transporter activity
GO:0015116 F sulfate transmembrane transporter activity
GO:0015301 F anion:anion antiporter activity
GO:0015701 P bicarbonate transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019531 F oxalate transmembrane transporter activity
GO:0019532 P oxalate transport
GO:0042391 P regulation of membrane potential
GO:0043231 C intracellular membrane-bounded organelle
GO:0051453 P regulation of intracellular pH
GO:0055085 P transmembrane transport
GO:0070062 C extracellular exosome
GO:1902358 P sulfate transmembrane transport
GO:1902476 P chloride transmembrane transport
FPKM:676.24 TPM:654.86
3898 A_SariASG_c16706_g2_i2
2541bp
sodium-independent_sulfate_anion_transporter_[Bombyx_mori]
GO:0005254 F chloride channel activity
GO:0005654 C nucleoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0008271 F secondary active sulfate transmembrane transporter activity
GO:0008272 P sulfate transport
GO:0008509 F anion transmembrane transporter activity
GO:0015106 F bicarbonate transmembrane transporter activity
GO:0015116 F sulfate transmembrane transporter activity
GO:0015301 F anion:anion antiporter activity
GO:0015701 P bicarbonate transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019531 F oxalate transmembrane transporter activity
GO:0019532 P oxalate transport
GO:0042391 P regulation of membrane potential
GO:0043231 C intracellular membrane-bounded organelle
GO:0051453 P regulation of intracellular pH
GO:0055085 P transmembrane transport
GO:0070062 C extracellular exosome
GO:1902358 P sulfate transmembrane transport
GO:1902476 P chloride transmembrane transport
FPKM:204.85 TPM:198.37
3899 A_SariASG_c16707_g1_i1
368bp
FPKM:3.24 TPM:3.14
3900 A_SariASG_c16707_g1_i2
202bp
FPKM:0.00 TPM:0.00
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