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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
151 A_BomaMSG_c10212_g1_i1
285bp
FPKM:0.50 TPM:0.22
152 A_BomaMSG_c10213_g1_i1
209bp
beta-1,3-glucan_recognition_protein_2_precursor_[Bombyx_mori]
GO:0002376 P immune system process
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005576 C extracellular region
GO:0005975 P carbohydrate metabolic process
GO:0030246 F carbohydrate binding
GO:0042742 P defense response to bacterium
GO:0045087 P innate immune response
GO:0045088 P regulation of innate immune response
FPKM:3.26 TPM:1.46
153 A_BomaMSG_c10213_g2_i1
218bp
beta-1,3-glucan_recognition_protein_2_precursor_[Bombyx_mori]
GO:0002376 P immune system process
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005576 C extracellular region
GO:0005975 P carbohydrate metabolic process
GO:0030246 F carbohydrate binding
GO:0042742 P defense response to bacterium
GO:0045087 P innate immune response
GO:0045088 P regulation of innate immune response
FPKM:2.87 TPM:1.28
154 A_BomaMSG_c10215_g1_i1
263bp
RNA_polymerase_II_subunit_A_C-terminal_domain_phosphatase_isoform_X2_[Bombyx_mori]
FPKM:10.05 TPM:4.49
155 A_BomaMSG_c10216_g1_i1
544bp
PREDICTED:_uncharacterized_protein_LOC106711407_[Papilio_machaon]
FPKM:4.44 TPM:1.98
156 A_BomaMSG_c10218_g1_i1
358bp
liprin-beta-1_isoform_X13_[Bombyx_mori]
GO:0005615 C extracellular space
FPKM:2.59 TPM:1.16
157 A_BomaMSG_c10219_g1_i1
217bp
Pol_protein_[Bombyx_mori]
FPKM:2.91 TPM:1.30
158 A_BomaMSG_c1021_g1_i1
222bp
protein_abrupt_[Bombyx_mori]
FPKM:6.36 TPM:2.84
159 A_BomaMSG_c10221_g1_i1
273bp
copper_homeostasis_protein_CutC_isoform_X3_[Bombyx_mori]
GO:0005507 F copper ion binding
GO:0005737 C cytoplasm
GO:0006878 P cellular copper ion homeostasis
GO:0055070 P copper ion homeostasis
FPKM:5.99 TPM:2.68
160 A_BomaMSG_c10222_g1_i1
244bp
FPKM:1.41 TPM:0.63
161 A_BomaMSG_c10222_g2_i1
269bp
FPKM:4.50 TPM:2.01
162 A_BomaMSG_c10224_g1_i1
282bp
putative_ATP-dependent_RNA_helicase_DHX57_[Bombyx_mori]
FPKM:11.17 TPM:4.99
163 A_BomaMSG_c10225_g1_i1
568bp
PREDICTED:_tyrosine-protein_phosphatase_Lar-like_[Amyelois_transitella]
GO:0001700 P embryonic development via the syncytial blastoderm
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005001 F transmembrane receptor protein tyrosine phosphatase activity
GO:0005515 F protein binding
GO:0005875 C microtubule associated complex
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0006470 P protein dephosphorylation
GO:0007155 P cell adhesion
GO:0007283 P spermatogenesis
GO:0007399 P nervous system development
GO:0007411 P axon guidance
GO:0007412 P axon target recognition
GO:0008045 P motor neuron axon guidance
GO:0008201 F heparin binding
GO:0008360 P regulation of cell shape
GO:0008594 P photoreceptor cell morphogenesis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0030424 C axon
GO:0031290 P retinal ganglion cell axon guidance
GO:0032093 F SAM domain binding
GO:0035335 P peptidyl-tyrosine dephosphorylation
GO:0045467 P R7 cell development
GO:0048477 P oogenesis
GO:0048675 P axon extension
GO:0048841 P regulation of axon extension involved in axon guidance
GO:0051124 P synaptic assembly at neuromuscular junction
GO:1903386 P negative regulation of homophilic cell adhesion
FPKM:1.29 TPM:0.58
164 A_BomaMSG_c10227_g1_i1
477bp
UPF0183_protein_CG7083_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
FPKM:3.70 TPM:1.66
165 A_BomaMSG_c10228_g1_i1
209bp
myosin-IIIb-like_isoform_X4_[Helicoverpa_armigera]
GO:0000146 F microfilament motor activity
GO:0000166 F nucleotide binding
GO:0003774 F cytoskeletal motor activity
GO:0003779 F actin binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0006468 P protein phosphorylation
GO:0007601 P visual perception
GO:0007605 P sensory perception of sound
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016459 C myosin complex
GO:0016740 F transferase activity
GO:0030175 C filopodium
GO:0030898 F microfilament motor activity
GO:0031941 C filamentous actin
GO:0043531 F ADP binding
GO:0046777 P protein autophosphorylation
GO:0050896 P response to stimulus
GO:0060002 F plus-end directed microfilament motor activity
FPKM:6.52 TPM:2.91
166 A_BomaMSG_c10229_g1_i1
245bp
FPKM:3.50 TPM:1.56
167 A_BomaMSG_c1022_g1_i1
205bp
FPKM:1.15 TPM:0.52
168 A_BomaMSG_c10230_g1_i1
401bp
epidermal_growth_factor_receptor_substrate_15-like_1_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005905 C clathrin-coated pit
GO:0006810 P transport
GO:0006895 P Golgi to endosome transport
GO:0006897 P endocytosis
GO:0007173 P epidermal growth factor receptor signaling pathway
GO:0008283 P cell population proliferation
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016050 P vesicle organization
GO:0016235 C aggresome
GO:0017124 F SH3 domain binding
GO:0019065 P receptor-mediated endocytosis of virus by host cell
GO:0030122 C AP-2 adaptor complex
GO:0030132 C clathrin coat of coated pit
GO:0030136 C clathrin-coated vesicle
GO:0031593 F polyubiquitin modification-dependent protein binding
GO:0031901 C early endosome membrane
GO:0032456 P endocytic recycling
GO:0042059 P negative regulation of epidermal growth factor receptor signaling pathway
GO:0042802 F identical protein binding
GO:0043231 C intracellular membrane-bounded organelle
GO:0046718 P viral entry into host cell
GO:0046872 F metal ion binding
GO:0048268 P clathrin coat assembly
GO:0060170 C ciliary membrane
FPKM:1.61 TPM:0.72
169 A_BomaMSG_c10231_g1_i1
233bp
FPKM:3.18 TPM:1.42
170 A_BomaMSG_c10232_g1_i1
217bp
small_subunit_processome_component_20_homolog_[Bombyx_mori]
FPKM:4.85 TPM:2.17
171 A_BomaMSG_c10233_g1_i1
464bp
phosphatidylinositol_3-kinase_1_[Bombyx_mori]
FPKM:3.43 TPM:1.53
172 A_BomaMSG_c10234_g1_i1
291bp
transcription_factor_TFIIIB_component_B''_[Bombyx_mori]
FPKM:2.85 TPM:1.28
173 A_BomaMSG_c10237_g1_i1
320bp
xanthine_dehydrogenase_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004854 F xanthine dehydrogenase activity
GO:0004855 F xanthine oxidase activity
GO:0005506 F iron ion binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005737 C cytoplasm
GO:0005777 C peroxisome
GO:0005829 C cytosol
GO:0009055 F electron transfer activity
GO:0009115 P xanthine catabolic process
GO:0016491 F oxidoreductase activity
GO:0016614 F oxidoreductase activity, acting on CH-OH group of donors
GO:0016903 F oxidoreductase activity, acting on the aldehyde or oxo group of donors
GO:0043546 F molybdopterin cofactor binding
GO:0046872 F metal ion binding
GO:0050660 F flavin adenine dinucleotide binding
GO:0051536 F iron-sulfur cluster binding
GO:0051537 F 2 iron, 2 sulfur cluster binding
GO:0055114 P obsolete oxidation-reduction process
FPKM:2.77 TPM:1.24
174 A_BomaMSG_c10237_g2_i1
226bp
xanthine_dehydrogenase_[Bombyx_mori]
GO:0001933 P negative regulation of protein phosphorylation
GO:0001937 P negative regulation of endothelial cell proliferation
GO:0003824 F catalytic activity
GO:0004854 F xanthine dehydrogenase activity
GO:0004855 F xanthine oxidase activity
GO:0005506 F iron ion binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005737 C cytoplasm
GO:0005777 C peroxisome
GO:0005829 C cytosol
GO:0006195 P purine nucleotide catabolic process
GO:0006919 P activation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0007595 P lactation
GO:0009055 F electron transfer activity
GO:0009115 P xanthine catabolic process
GO:0010629 P negative regulation of gene expression
GO:0016491 F oxidoreductase activity
GO:0016529 C sarcoplasmic reticulum
GO:0016614 F oxidoreductase activity, acting on CH-OH group of donors
GO:0016903 F oxidoreductase activity, acting on the aldehyde or oxo group of donors
GO:0030856 P regulation of epithelial cell differentiation
GO:0042803 F protein homodimerization activity
GO:0043546 F molybdopterin cofactor binding
GO:0045602 P negative regulation of endothelial cell differentiation
GO:0046872 F metal ion binding
GO:0050660 F flavin adenine dinucleotide binding
GO:0051536 F iron-sulfur cluster binding
GO:0051537 F 2 iron, 2 sulfur cluster binding
GO:0051898 P negative regulation of protein kinase B signaling
GO:0055114 P obsolete oxidation-reduction process
GO:1900745 P positive regulation of p38MAPK cascade
GO:1900747 P negative regulation of vascular endothelial growth factor signaling pathway
GO:2000379 P positive regulation of reactive oxygen species metabolic process
GO:2001213 P negative regulation of vasculogenesis
FPKM:8.64 TPM:3.86
175 A_BomaMSG_c10238_g1_i1
221bp
FPKM:2.76 TPM:1.23
176 A_BomaMSG_c10239_g1_i1
296bp
FPKM:2.76 TPM:1.23
177 A_BomaMSG_c1023_g1_i1
644bp
coronin-6_isoform_X3_[Bombyx_mori]
GO:0005515 F protein binding
GO:0015629 C actin cytoskeleton
GO:0030036 P actin cytoskeleton organization
GO:0051015 F actin filament binding
FPKM:1.91 TPM:0.85
178 A_BomaMSG_c10240_g1_i1
448bp
uncharacterized_protein_LOC110373722_isoform_X1_[Helicoverpa_armigera]
FPKM:2.71 TPM:1.21
179 A_BomaMSG_c10241_g1_i1
339bp
craniofacial_development_protein_2-like_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
FPKM:1.78 TPM:0.79
180 A_BomaMSG_c10242_g1_i1
709bp
active_breakpoint_cluster_region-related_protein_isoform_X3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0002692 P negative regulation of cellular extravasation
GO:0004674 F protein serine/threonine kinase activity
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0007165 P signal transduction
GO:0007420 P brain development
GO:0014069 C postsynaptic density
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019899 F enzyme binding
GO:0030036 P actin cytoskeleton organization
GO:0030054 C cell junction
GO:0030336 P negative regulation of cell migration
GO:0032496 P response to lipopolysaccharide
GO:0035023 P regulation of Rho protein signal transduction
GO:0035556 P intracellular signal transduction
GO:0042472 P inner ear morphogenesis
GO:0043114 P regulation of vascular permeability
GO:0043234 C protein-containing complex
GO:0043314 P negative regulation of neutrophil degranulation
GO:0043547 P positive regulation of GTPase activity
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0046777 P protein autophosphorylation
GO:0048008 P platelet-derived growth factor receptor signaling pathway
GO:0050728 P negative regulation of inflammatory response
GO:0050766 P positive regulation of phagocytosis
GO:0050885 P neuromuscular process controlling balance
GO:0051726 P regulation of cell cycle
GO:0060313 P negative regulation of blood vessel remodeling
GO:0070062 C extracellular exosome
FPKM:2.29 TPM:1.02
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