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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
121 A_BomaMSG_c1017_g1_i1
310bp
FPKM:7.13 TPM:3.19
122 A_BomaMSG_c10180_g1_i1
631bp
FPKM:1.96 TPM:0.88
123 A_BomaMSG_c10181_g1_i1
330bp
FPKM:1.87 TPM:0.83
124 A_BomaMSG_c10183_g1_i1
277bp
FPKM:2.11 TPM:0.94
125 A_BomaMSG_c10184_g1_i1
262bp
putative_Copia_protein_[Danaus_plexippus_plexippus]
FPKM:7.16 TPM:3.20
126 A_BomaMSG_c10186_g1_i1
231bp
FPKM:4.07 TPM:1.82
127 A_BomaMSG_c10188_g1_i1
201bp
polypeptide_N-acetylgalactosaminyltransferase_1_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0004653 F polypeptide N-acetylgalactosaminyltransferase activity
GO:0005794 C Golgi apparatus
GO:0005795 C Golgi stack
GO:0006486 P protein glycosylation
GO:0009312 P oligosaccharide biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0030246 F carbohydrate binding
GO:0046872 F metal ion binding
FPKM:2.46 TPM:1.10
128 A_BomaMSG_c1018_g1_i1
247bp
FPKM:0.69 TPM:0.31
129 A_BomaMSG_c10190_g1_i1
287bp
FPKM:0.49 TPM:0.22
130 A_BomaMSG_c10193_g1_i1
467bp
FPKM:2.76 TPM:1.23
131 A_BomaMSG_c10194_g1_i1
399bp
FPKM:3.24 TPM:1.45
132 A_BomaMSG_c10195_g1_i1
211bp
ribonuclease_3_[Bombyx_mori]
FPKM:8.44 TPM:3.77
133 A_BomaMSG_c10196_g1_i1
227bp
FPKM:1.71 TPM:0.76
134 A_BomaMSG_c10197_g1_i1
235bp
LOW_QUALITY_PROTEIN:_supporter_of_activation_of_yellow_protein_[Bombyx_mori]
FPKM:4.67 TPM:2.09
135 A_BomaMSG_c10198_g1_i1
438bp
adenosine_deaminase_related_growth_factor_precursor_[Bombyx_mori]
GO:0004000 F adenosine deaminase activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005829 C cytosol
GO:0006154 P adenosine catabolic process
GO:0008083 F growth factor activity
GO:0008270 F zinc ion binding
GO:0016787 F hydrolase activity
GO:0019239 F deaminase activity
GO:0031685 F adenosine receptor binding
GO:0043103 P hypoxanthine salvage
GO:0043394 F proteoglycan binding
GO:0046103 P inosine biosynthetic process
GO:0046872 F metal ion binding
FPKM:3.27 TPM:1.46
136 A_BomaMSG_c10199_g1_i1
531bp
FPKM:2.83 TPM:1.26
137 A_BomaMSG_c10199_g2_i1
314bp
FPKM:3.68 TPM:1.65
138 A_BomaMSG_c1019_g1_i1
401bp
F-box_only_protein_7-like_[Bombyx_mori]
FPKM:2.68 TPM:1.20
139 A_BomaMSG_c101_g1_i1
253bp
FPKM:1.29 TPM:0.58
140 A_BomaMSG_c10200_g1_i1
289bp
FPKM:10.13 TPM:4.53
141 A_BomaMSG_c10201_g1_i1
206bp
FPKM:9.09 TPM:4.06
142 A_BomaMSG_c10202_g1_i1
400bp
FPKM:2.15 TPM:0.96
143 A_BomaMSG_c10203_g1_i1
367bp
uncharacterized_protein_LOC101741752_isoform_X2_[Bombyx_mori]
FPKM:1.86 TPM:0.83
144 A_BomaMSG_c10204_g1_i1
348bp
uncharacterized_protein_LOC101747197_[Bombyx_mori]
FPKM:6.11 TPM:2.73
145 A_BomaMSG_c10205_g1_i1
414bp
tyrosine-protein_phosphatase_CDC14_homolog_isoform_X2_[Bombyx_mori]
FPKM:1.78 TPM:0.80
146 A_BomaMSG_c10206_g1_i1
492bp
dorsal-ventral_patterning_protein_Sog_isoform_X2_[Bombyx_mori]
GO:0005518 F collagen binding
GO:0005886 C plasma membrane
GO:0007275 P multicellular organism development
GO:0007313 P maternal specification of dorsal/ventral axis, oocyte, soma encoded
GO:0007354 P zygotic determination of anterior/posterior axis, embryo
GO:0007362 P terminal region determination
GO:0007378 P amnioserosa formation
GO:0007398 P ectoderm development
GO:0008083 F growth factor activity
GO:0008293 P torso signaling pathway
GO:0008586 P imaginal disc-derived wing vein morphogenesis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030509 P BMP signaling pathway
GO:0030510 P regulation of BMP signaling pathway
GO:0030511 P positive regulation of transforming growth factor beta receptor signaling pathway
GO:0030512 P negative regulation of transforming growth factor beta receptor signaling pathway
GO:0035271 P ring gland development
GO:0040008 P regulation of growth
GO:0061328 P posterior Malpighian tubule development
FPKM:1.38 TPM:0.62
147 A_BomaMSG_c10206_g2_i1
217bp
dorsal-ventral_patterning_protein_Sog_isoform_X1_[Bombyx_mori]
GO:0001501 P skeletal system development
GO:0001502 P cartilage condensation
GO:0001503 P ossification
GO:0001894 P tissue homeostasis
GO:0001958 P endochondral ossification
GO:0002062 P chondrocyte differentiation
GO:0003007 P heart morphogenesis
GO:0005201 F extracellular matrix structural constituent
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005581 C collagen trimer
GO:0005585 C collagen type II trimer
GO:0005604 C basement membrane
GO:0005615 C extracellular space
GO:0005737 C cytoplasm
GO:0006029 P proteoglycan metabolic process
GO:0007417 P central nervous system development
GO:0007601 P visual perception
GO:0007605 P sensory perception of sound
GO:0010468 P regulation of gene expression
GO:0030199 P collagen fibril organization
GO:0030903 P notochord development
GO:0031012 C extracellular matrix
GO:0035108 P limb morphogenesis
GO:0042472 P inner ear morphogenesis
GO:0042802 F identical protein binding
GO:0046872 F metal ion binding
GO:0048407 F platelet-derived growth factor binding
GO:0048705 P skeletal system morphogenesis
GO:0048839 P inner ear development
GO:0051216 P cartilage development
GO:0060021 P roof of mouth development
GO:0060174 P limb bud formation
GO:0060272 P embryonic skeletal joint morphogenesis
GO:0060348 P bone development
GO:0060351 P cartilage development involved in endochondral bone morphogenesis
GO:0071599 P otic vesicle development
GO:0071773 P cellular response to BMP stimulus
GO:2001240 P negative regulation of extrinsic apoptotic signaling pathway in absence of ligand
FPKM:2.91 TPM:1.30
148 A_BomaMSG_c1020_g1_i1
247bp
poly(U)-binding-splicing_factor_half_pint_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000380 P alternative mRNA splicing, via spliceosome
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0001558 P regulation of cell growth
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006376 P mRNA splice site selection
GO:0006397 P mRNA processing
GO:0007275 P multicellular organism development
GO:0007282 P cystoblast division
GO:0008266 F poly(U) RNA binding
GO:0008380 P RNA splicing
GO:0022008 P neurogenesis
GO:0030154 P cell differentiation
GO:0043234 C protein-containing complex
GO:0048477 P oogenesis
GO:0051726 P regulation of cell cycle
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
FPKM:6.17 TPM:2.76
149 A_BomaMSG_c10210_g1_i1
235bp
FPKM:3.89 TPM:1.74
150 A_BomaMSG_c10211_g1_i1
330bp
FPKM:1.86 TPM:0.83
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