SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search Assembled RNA-Seq

previous next from show/42653
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1501 A_BomaMSG_c11593_g1_i1
312bp
FPKM:9.12 TPM:4.07
1502 A_BomaMSG_c11594_g1_i1
335bp
FPKM:4.36 TPM:1.95
1503 A_BomaMSG_c11596_g1_i1
488bp
Protein_phosphatase_2_regulatory_subunit_[Operophtera_brumata]
FPKM:3.98 TPM:1.78
1504 A_BomaMSG_c11597_g1_i1
520bp
FPKM:5.46 TPM:2.44
1505 A_BomaMSG_c11599_g1_i1
663bp
Retrovirus-related_Pol_polyprotein_from_transposon_412-like_Protein_[Tribolium_castaneum]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:4.20 TPM:1.88
1506 A_BomaMSG_c1159_g1_i1
215bp
FPKM:2.99 TPM:1.34
1507 A_BomaMSG_c115_g1_i1
241bp
protein_kinase_C_[Bombyx_mori]
GO:0000165 P MAPK cascade
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004697 F protein kinase C activity
GO:0005524 F ATP binding
GO:0005622 C intracellular anatomical structure
GO:0005623 C obsolete cell
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0006468 P protein phosphorylation
GO:0006935 P chemotaxis
GO:0007218 P neuropeptide signaling pathway
GO:0007269 P neurotransmitter secretion
GO:0007606 P sensory perception of chemical stimulus
GO:0007635 P chemosensory behavior
GO:0008306 P associative learning
GO:0016020 C membrane
GO:0016079 P synaptic vesicle exocytosis
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018105 P peptidyl-serine phosphorylation
GO:0035556 P intracellular signal transduction
GO:0040012 P regulation of locomotion
GO:0040024 P dauer larval development
GO:0045202 C synapse
GO:0046872 F metal ion binding
GO:0048009 P insulin-like growth factor receptor signaling pathway
GO:0050893 P sensory processing
GO:0050920 P regulation of chemotaxis
GO:0050927 P positive regulation of positive chemotaxis
GO:0050975 P sensory perception of touch
GO:0098793 C presynapse
GO:1902074 P response to salt
GO:1990504 P dense core granule exocytosis
GO:2001024 P negative regulation of response to drug
FPKM:7.29 TPM:3.26
1508 A_BomaMSG_c11600_g1_i1
1183bp
hypothetical_protein_[Acinetobacter_baumannii]
FPKM:3.39 TPM:1.51
1509 A_BomaMSG_c11602_g1_i1
219bp
DNA_replication_ATP-dependent_helicase/nuclease_DNA2_[Bombyx_mori]
FPKM:1.89 TPM:0.84
1510 A_BomaMSG_c11603_g1_i1
250bp
PREDICTED:_uncharacterized_protein_LOC106720343_[Papilio_machaon]
FPKM:4.66 TPM:2.08
1511 A_BomaMSG_c11604_g1_i1
369bp
C-Cbl-associated_protein_isoform_A_[Operophtera_brumata]
FPKM:2.15 TPM:0.96
1512 A_BomaMSG_c11605_g1_i1
209bp
uncharacterized_protein_LOC101743712_[Bombyx_mori]
FPKM:0.00 TPM:0.00
1513 A_BomaMSG_c11605_g1_i2
518bp
uncharacterized_protein_LOC101743712_[Bombyx_mori]
FPKM:3.11 TPM:1.39
1514 A_BomaMSG_c11606_g1_i1
265bp
FPKM:5.81 TPM:2.60
1515 A_BomaMSG_c11607_g1_i1
273bp
FPKM:14.15 TPM:6.32
1516 A_BomaMSG_c11608_g1_i1
236bp
F-actin-methionine_sulfoxide_oxidase_Mical_isoform_X4_[Bombyx_mori]
FPKM:8.46 TPM:3.78
1517 A_BomaMSG_c1160_g1_i1
441bp
FPKM:2.31 TPM:1.03
1518 A_BomaMSG_c11610_g1_i1
231bp
PREDICTED:_uncharacterized_protein_LOC107067961_isoform_X2_[Polistes_dominula]
FPKM:7.33 TPM:3.27
1519 A_BomaMSG_c11611_g1_i1
971bp
alpha-1,2-mannosyltransferase_ALG9_isoform_X1_[Bombyx_mori]
GO:0000026 F alpha-1,2-mannosyltransferase activity
GO:0000030 F mannosyltransferase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006486 P protein glycosylation
GO:0006488 P dolichol-linked oligosaccharide biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0052918 F dol-P-Man:Man(8)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase activity
GO:0052926 F dol-P-Man:Man(6)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase activity
GO:0097502 P mannosylation
FPKM:2.38 TPM:1.06
1520 A_BomaMSG_c11612_g1_i1
402bp
FPKM:9.61 TPM:4.29
1521 A_BomaMSG_c11615_g1_i1
528bp
FPKM:1.42 TPM:0.64
1522 A_BomaMSG_c11617_g1_i1
381bp
FPKM:6.40 TPM:2.86
1523 A_BomaMSG_c11618_g1_i1
269bp
FPKM:1.12 TPM:0.50
1524 A_BomaMSG_c11619_g1_i1
247bp
uncharacterized_protein_LOC110385830_[Bombyx_mori]
FPKM:4.80 TPM:2.15
1525 A_BomaMSG_c11620_g1_i1
280bp
endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:6.18 TPM:2.76
1526 A_BomaMSG_c11621_g1_i1
240bp
protein_wntless_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007275 P multicellular organism development
GO:0007367 P segment polarity determination
GO:0008587 P imaginal disc-derived wing margin morphogenesis
GO:0010008 C endosome membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016055 P Wnt signaling pathway
GO:0017147 F Wnt-protein binding
GO:0030054 C cell junction
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0030285 C integral component of synaptic vesicle membrane
GO:0031227 C intrinsic component of endoplasmic reticulum membrane
GO:0031228 C intrinsic component of Golgi membrane
GO:0031302 C intrinsic component of endosome membrane
GO:0031594 C neuromuscular junction
GO:0033157 P regulation of intracellular protein transport
GO:0042734 C presynaptic membrane
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0050714 P positive regulation of protein secretion
FPKM:4.42 TPM:1.98
1527 A_BomaMSG_c11622_g1_i1
405bp
FPKM:3.16 TPM:1.41
1528 A_BomaMSG_c11627_g1_i1
344bp
zinc_finger_protein_850_[Danaus_plexippus_plexippus]
FPKM:3.46 TPM:1.55
1529 A_BomaMSG_c11627_g2_i1
229bp
FPKM:5.83 TPM:2.61
1530 A_BomaMSG_c11633_g1_i1
355bp
FPKM:3.61 TPM:1.61
previous next from show/42653

- SilkBase 1999-2023 -