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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1081 A_BomaMSG_c1119_g1_i1
282bp
FPKM:6.60 TPM:2.95
1082 A_BomaMSG_c11200_g1_i1
211bp
FPKM:3.17 TPM:1.41
1083 A_BomaMSG_c11201_g1_i1
563bp
FPKM:1.96 TPM:0.87
1084 A_BomaMSG_c11202_g1_i1
498bp
C-myc_promoter-binding_protein_isoform_X1_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0017112 F guanyl-nucleotide exchange factor activity
GO:0030659 C cytoplasmic vesicle membrane
GO:0030904 C retromer complex
GO:0031410 C cytoplasmic vesicle
GO:0032593 C insulin-responsive compartment
GO:0032869 P cellular response to insulin stimulus
GO:0043547 P positive regulation of GTPase activity
GO:0072659 P protein localization to plasma membrane
FPKM:2.51 TPM:1.12
1085 A_BomaMSG_c11203_g1_i1
774bp
LOW_QUALITY_PROTEIN:_mediator_of_RNA_polymerase_II_transcription_subunit_23_[Bombyx_mori]
GO:0001104 F transcription coregulator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0016592 C mediator complex
FPKM:2.91 TPM:1.30
1086 A_BomaMSG_c11204_g1_i1
244bp
uncharacterized_protein_LOC101739175_[Bombyx_mori]
FPKM:1.41 TPM:0.63
1087 A_BomaMSG_c11205_g1_i1
433bp
DNA_polymerase_V_[Bombyx_mori]
FPKM:3.09 TPM:1.38
1088 A_BomaMSG_c11206_g1_i1
315bp
FPKM:4.07 TPM:1.82
1089 A_BomaMSG_c11207_g1_i1
432bp
tail-anchored_protein_insertion_receptor_WRB_[Bombyx_mori]
FPKM:2.86 TPM:1.28
1090 A_BomaMSG_c11208_g1_i1
520bp
endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:3.46 TPM:1.54
1091 A_BomaMSG_c1120_g1_i1
324bp
RNA-directed_DNA_polymerase_from_mobile_element_jockey_[Danaus_plexippus_plexippus]
FPKM:1.16 TPM:0.52
1092 A_BomaMSG_c11210_g1_i1
384bp
PREDICTED:_cleavage_and_polyadenylation_specificity_factor_73-like_[Amyelois_transitella]
GO:0003723 F RNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004521 F endoribonuclease activity
GO:0005634 C nucleus
GO:0005847 C mRNA cleavage and polyadenylation specificity factor complex
GO:0006397 P mRNA processing
GO:0006398 P mRNA 3'-end processing by stem-loop binding and cleavage
GO:0008409 F 5'-3' exonuclease activity
GO:0016787 F hydrolase activity
GO:0030529 C ribonucleoprotein complex
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
FPKM:3.16 TPM:1.41
1093 A_BomaMSG_c11211_g1_i1
477bp
FPKM:12.55 TPM:5.61
1094 A_BomaMSG_c11212_g1_i1
538bp
muscarinic_acetylcholine_receptor_DM1_[Bombyx_mori]
GO:0004871 F obsolete signal transducer activity
GO:0004930 F G protein-coupled receptor activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007165 P signal transduction
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007197 P adenylate cyclase-inhibiting G protein-coupled acetylcholine receptor signaling pathway
GO:0007200 P phospholipase C-activating G protein-coupled receptor signaling pathway
GO:0007207 P phospholipase C-activating G protein-coupled acetylcholine receptor signaling pathway
GO:0007213 P G protein-coupled acetylcholine receptor signaling pathway
GO:0007271 P synaptic transmission, cholinergic
GO:0008227 F G protein-coupled amine receptor activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016907 F G protein-coupled acetylcholine receptor activity
GO:0030054 C cell junction
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
FPKM:1.91 TPM:0.85
1095 A_BomaMSG_c11213_g1_i1
207bp
FPKM:14.55 TPM:6.50
1096 A_BomaMSG_c11214_g1_i1
391bp
FPKM:2.51 TPM:1.12
1097 A_BomaMSG_c11216_g1_i1
525bp
aladin_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005643 C nuclear pore
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0006406 P mRNA export from nucleus
GO:0006409 P tRNA export from nucleus
GO:0006810 P transport
GO:0006913 P nucleocytoplasmic transport
GO:0007077 P mitotic nuclear membrane disassembly
GO:0007612 P learning
GO:0009566 P fertilization
GO:0010827 P regulation of glucose transmembrane transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016032 P viral process
GO:0016925 P protein sumoylation
GO:0019083 P viral transcription
GO:0031047 P gene silencing by RNA
GO:0031965 C nuclear membrane
GO:0046822 P regulation of nucleocytoplasmic transport
GO:0051028 P mRNA transport
GO:0075733 P intracellular transport of virus
GO:1900034 P regulation of cellular response to heat
FPKM:2.15 TPM:0.96
1098 A_BomaMSG_c11217_g1_i1
638bp
FPKM:2.07 TPM:0.92
1099 A_BomaMSG_c11218_g1_i1
590bp
protein_obstructor-E_[Bombyx_mori]
GO:0000281 P mitotic cytokinesis
GO:0005576 C extracellular region
GO:0006030 P chitin metabolic process
GO:0007049 P cell cycle
GO:0007275 P multicellular organism development
GO:0008061 F chitin binding
GO:0009790 P embryo development
GO:0030703 P eggshell formation
GO:0032465 P regulation of cytokinesis
GO:0051301 P cell division
FPKM:3.52 TPM:1.57
1100 A_BomaMSG_c11219_g1_i1
480bp
FPKM:2.85 TPM:1.28
1101 A_BomaMSG_c1121_g1_i1
233bp
PREDICTED:_serine/threonine-protein_phosphatase_2A_regulatory_subunit_B''_subunit_beta-like,_partial_[Papilio_machaon]
GO:0000159 C protein phosphatase type 2A complex
GO:0004721 F phosphoprotein phosphatase activity
GO:0004722 F protein serine/threonine phosphatase activity
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006470 P protein dephosphorylation
GO:0007050 P regulation of cell cycle
GO:0008601 F protein phosphatase regulator activity
GO:0034047 P regulation of phosphoprotein phosphatase activity
GO:0046872 F metal ion binding
FPKM:5.57 TPM:2.49
1102 A_BomaMSG_c11220_g1_i1
505bp
progestin_and_adipoQ_receptor_family_member_3_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0001933 P negative regulation of protein phosphorylation
GO:0004872 F signaling receptor activity
GO:0005794 C Golgi apparatus
GO:0010977 P negative regulation of neuron projection development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0033137 P negative regulation of peptidyl-serine phosphorylation
GO:0034067 P protein localization to Golgi apparatus
GO:0043407 P negative regulation of MAP kinase activity
FPKM:1.90 TPM:0.85
1103 A_BomaMSG_c11222_g1_i1
910bp
acyl-CoA_synthetase_family_member_2,_mitochondrial_isoform_X3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0004497 F monooxygenase activity
GO:0005524 F ATP binding
GO:0005777 C peroxisome
GO:0008152 P metabolic process
GO:0008218 P bioluminescence
GO:0016491 F oxidoreductase activity
GO:0046872 F metal ion binding
GO:0047077 F Photinus-luciferin 4-monooxygenase (ATP-hydrolyzing) activity
GO:0055114 P obsolete oxidation-reduction process
FPKM:3.81 TPM:1.70
1104 A_BomaMSG_c11223_g1_i1
307bp
FPKM:7.70 TPM:3.44
1105 A_BomaMSG_c11224_g1_i1
526bp
FPKM:2.15 TPM:0.96
1106 A_BomaMSG_c11225_g1_i1
396bp
exportin-5_[Bombyx_mori]
GO:0000049 F tRNA binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006611 P protein export from nucleus
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0008536 F small GTPase binding
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
GO:0031047 P gene silencing by RNA
GO:0035281 P pre-miRNA export from nucleus
GO:0042565 C RNA nuclear export complex
GO:0044822 F RNA binding
GO:0070883 F pre-miRNA binding
GO:0090631 F nucleocytoplasmic carrier activity
GO:1900370 P positive regulation of RNA interference
FPKM:6.83 TPM:3.05
1107 A_BomaMSG_c11227_g1_i1
234bp
protein_ECT2_isoform_X4_[Bombyx_mori]
FPKM:4.71 TPM:2.10
1108 A_BomaMSG_c11228_g1_i1
284bp
FPKM:3.50 TPM:1.56
1109 A_BomaMSG_c11229_g1_i1
582bp
FPKM:3.58 TPM:1.60
1110 A_BomaMSG_c1122_g1_i1
231bp
PREDICTED:_LOW_QUALITY_PROTEIN:_ATPase_family_AAA_domain-containing_protein_2-like_[Papilio_polytes]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016568 P chromatin organization
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
FPKM:1.63 TPM:0.73
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