SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c11210_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_cleavage_and_polyadenylation_specificity_factor_73-like_[Amyelois_transitella]
Ontology
GO:0003723 F RNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004521 F endoribonuclease activity
GO:0005634 C nucleus
GO:0005847 C mRNA cleavage and polyadenylation specificity factor complex
GO:0006397 P mRNA processing
GO:0006398 P mRNA 3'-end processing by stem-loop binding and cleavage
GO:0008409 F 5'-3' exonuclease activity
GO:0016787 F hydrolase activity
GO:0030529 C ribonucleoprotein complex
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
Transcript
Level		FPKM:3.16 TPM:1.41
ORF EntryO_BomaMSG2692_3prime_partial:A_BomaMSG_c11210_g1_i1
Sequence
(Nucleotide)
GTTTTATCTTATTGTGATTAAGCTATTGGTTAAATCCCTGTAAATGACTATTTGTAAATA
AACAAAATGACTACAAATCCAAGAAAAGGCACTGATCCAGTGCCTGCGGAGGAAAGCGAT
CAATTGACAATAAGACCACTTGGAGCTGGCCAAGAAGTTGGCAGATCATGCATCATGTTG
GAGTTCAAAGGGAAAAAGATAATGTTGGACTGTGGCATCCATCCTGGTTTGTCTGGAATG
GACGCCCTACCCTTTATAGACCTTATAGAGGCAGACGAAGTGGATCTTCTGTTAGTTTCA
CATTTTCATTTGGACCACAGTGGAGCTCTTCCGTGGTTCCTGACGAAGACTTCCTTCAAA
GGTCGAGTTTTCATGACACATGCC
(384 bp)

- SilkBase 1999-2023 -