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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
8791 O_BomoIG1414_5prime_partial:A_BomoIG_DN30205_c1_g1_i2
651bp
 neuroligin-4,_Y-linked_isoform_X1_[Bombyx_mori]
GO:0002087 P regulation of respiratory gaseous exchange by nervous system process
GO:0004872 F signaling receptor activity
GO:0005515 F protein binding
GO:0005615 C extracellular space
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006898 P receptor-mediated endocytosis
GO:0007155 P cell adhesion
GO:0007158 P neuron cell-cell adhesion
GO:0007416 P synapse assembly
GO:0007612 P learning
GO:0008542 P visual learning
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0030139 C endocytic vesicle
GO:0030425 C dendrite
GO:0030534 P adult behavior
GO:0035176 P social behavior
GO:0042043 F neurexin family protein binding
GO:0043025 C neuronal cell body
GO:0045202 C synapse
GO:0048675 P axon extension
GO:0048709 P oligodendrocyte differentiation
GO:0050804 P modulation of chemical synaptic transmission
GO:0050808 P synapse organization
GO:0050839 F cell adhesion molecule binding
GO:0051965 P positive regulation of synapse assembly
GO:0051966 P regulation of synaptic transmission, glutamatergic
GO:0051968 P positive regulation of synaptic transmission, glutamatergic
GO:0052689 F carboxylic ester hydrolase activity
GO:0060024 P rhythmic synaptic transmission
GO:0060076 C excitatory synapse
GO:0060077 C inhibitory synapse
GO:0060079 P excitatory postsynaptic potential
GO:0060080 P inhibitory postsynaptic potential
GO:0060291 P long-term synaptic potentiation
GO:0060999 P positive regulation of dendritic spine development
GO:0061001 P regulation of dendritic spine morphogenesis
GO:0061002 P negative regulation of dendritic spine morphogenesis
GO:0071625 P vocalization behavior
GO:0090394 P negative regulation of excitatory postsynaptic potential
GO:0097104 P postsynaptic membrane assembly
GO:0097105 P presynaptic membrane assembly
GO:0097110 F scaffold protein binding
GO:0097151 P positive regulation of inhibitory postsynaptic potential
GO:0098794 C postsynapse
GO:1900271 P regulation of long-term synaptic potentiation
GO:1902474 P positive regulation of protein localization to synapse
GO:2000310 P regulation of NMDA receptor activity
GO:2000311 P regulation of AMPA receptor activity
GO:2000331 P regulation of terminal button organization
GO:2000463 P positive regulation of excitatory postsynaptic potential
GO:2000809 P positive regulation of synaptic vesicle clustering
GO:2000969 P positive regulation of AMPA receptor activity
8792 O_BomoIG14150_complete:A_BomoIG_DN32655_c4_g6_i5
209bp
 cathepsin_D_precursor_[Bombyx_mori]
GO:0004190 F aspartic-type endopeptidase activity
GO:0005764 C lysosome
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0016787 F hydrolase activity
8793 O_BomoIG14151_complete:A_BomoIG_DN32655_c4_g6_i5
111bp
8794 O_BomoIG14152_complete:A_BomoIG_DN32655_c4_g3_i7
838bp
 whirlin_[Bombyx_mori]
GO:0001895 P retina homeostasis
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0007605 P sensory perception of sound
GO:0030426 C growth cone
GO:0032420 C stereocilium
GO:0042995 C cell projection
GO:0050953 P sensory perception of light stimulus
GO:0060122 P inner ear receptor cell stereocilium organization
8795 O_BomoIG14153_complete:A_BomoIG_DN32655_c4_g3_i7
154bp
8796 O_BomoIG14154_5prime_partial:A_BomoIG_DN32655_c4_g3_i7
120bp
8797 O_BomoIG14155_complete:A_BomoIG_DN32655_c4_g6_i6
209bp
 cathepsin_D_precursor_[Bombyx_mori]
GO:0004190 F aspartic-type endopeptidase activity
GO:0005764 C lysosome
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0016787 F hydrolase activity
8798 O_BomoIG14156_complete:A_BomoIG_DN32655_c4_g6_i6
112bp
8799 O_BomoIG14157_complete:A_BomoIG_DN32655_c4_g6_i6
111bp
8800 O_BomoIG14158_complete:A_BomoIG_DN32655_c4_g6_i6
107bp
 cathepsin_D_precursor_[Bombyx_mori]
GO:0004190 F aspartic-type endopeptidase activity
GO:0005764 C lysosome
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0016787 F hydrolase activity
8801 O_BomoIG14159_complete:A_BomoIG_DN32655_c4_g3_i10
211bp
 whirlin_[Bombyx_mori]
GO:0001895 P retina homeostasis
GO:0001917 C photoreceptor inner segment
GO:0002141 C stereocilia ankle link
GO:0002142 C stereocilia ankle link complex
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005884 C actin filament
GO:0005929 C cilium
GO:0007605 P sensory perception of sound
GO:0010628 P positive regulation of gene expression
GO:0021694 P cerebellar Purkinje cell layer formation
GO:0030426 C growth cone
GO:0032391 C photoreceptor connecting cilium
GO:0032420 C stereocilium
GO:0032421 C stereocilium bundle
GO:0032426 C stereocilium tip
GO:0036064 C ciliary basal body
GO:0042803 F protein homodimerization activity
GO:0042995 C cell projection
GO:0045184 P establishment of protein localization
GO:0046982 F protein heterodimerization activity
GO:0050953 P sensory perception of light stimulus
GO:0060122 P inner ear receptor cell stereocilium organization
GO:1990075 C periciliary membrane compartment
GO:1990227 P paranodal junction maintenance
GO:1990696 C USH2 complex
8802 O_BomoIG1415_5prime_partial:A_BomoIG_DN30205_c1_g1_i3
182bp
 neuroligin-4,_Y-linked_isoform_X1_[Bombyx_mori]
GO:0004104 F cholinesterase activity
GO:0005615 C extracellular space
GO:0005886 C plasma membrane
GO:0007155 P cell adhesion
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030424 C axon
GO:0030425 C dendrite
GO:0045202 C synapse
GO:0046929 P negative regulation of neurotransmitter secretion
8803 O_BomoIG14160_complete:A_BomoIG_DN32655_c4_g3_i11
852bp
 whirlin_[Bombyx_mori]
GO:0001895 P retina homeostasis
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0007605 P sensory perception of sound
GO:0030426 C growth cone
GO:0032420 C stereocilium
GO:0042995 C cell projection
GO:0050953 P sensory perception of light stimulus
GO:0060122 P inner ear receptor cell stereocilium organization
8804 O_BomoIG14161_complete:A_BomoIG_DN32655_c4_g3_i11
154bp
8805 O_BomoIG14162_3prime_partial:A_BomoIG_DN32655_c4_g3_i11
108bp
8806 O_BomoIG14163_complete:A_BomoIG_DN32655_c4_g3_i12
760bp
 whirlin_[Bombyx_mori]
GO:0001895 P retina homeostasis
GO:0001917 C photoreceptor inner segment
GO:0002141 C stereocilia ankle link
GO:0002142 C stereocilia ankle link complex
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005884 C actin filament
GO:0005929 C cilium
GO:0007605 P sensory perception of sound
GO:0010628 P positive regulation of gene expression
GO:0021694 P cerebellar Purkinje cell layer formation
GO:0030426 C growth cone
GO:0032391 C photoreceptor connecting cilium
GO:0032420 C stereocilium
GO:0032421 C stereocilium bundle
GO:0032426 C stereocilium tip
GO:0036064 C ciliary basal body
GO:0042803 F protein homodimerization activity
GO:0042995 C cell projection
GO:0045184 P establishment of protein localization
GO:0046982 F protein heterodimerization activity
GO:0050953 P sensory perception of light stimulus
GO:0060122 P inner ear receptor cell stereocilium organization
GO:1990075 C periciliary membrane compartment
GO:1990227 P paranodal junction maintenance
GO:1990696 C USH2 complex
8807 O_BomoIG14164_5prime_partial:A_BomoIG_DN32655_c4_g3_i12
120bp
8808 O_BomoIG14165_5prime_partial:A_BomoIG_DN32655_c4_g7_i1
111bp
8809 O_BomoIG14166_complete:A_BomoIG_DN32655_c4_g6_i7
137bp
 cathepsin_D_precursor_[Bombyx_mori]
GO:0004190 F aspartic-type endopeptidase activity
GO:0005764 C lysosome
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0016787 F hydrolase activity
8810 O_BomoIG14167_complete:A_BomoIG_DN32655_c4_g3_i14
760bp
 whirlin_[Bombyx_mori]
GO:0001895 P retina homeostasis
GO:0001917 C photoreceptor inner segment
GO:0002141 C stereocilia ankle link
GO:0002142 C stereocilia ankle link complex
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005884 C actin filament
GO:0005929 C cilium
GO:0007605 P sensory perception of sound
GO:0010628 P positive regulation of gene expression
GO:0021694 P cerebellar Purkinje cell layer formation
GO:0030426 C growth cone
GO:0032391 C photoreceptor connecting cilium
GO:0032420 C stereocilium
GO:0032421 C stereocilium bundle
GO:0032426 C stereocilium tip
GO:0036064 C ciliary basal body
GO:0042803 F protein homodimerization activity
GO:0042995 C cell projection
GO:0045184 P establishment of protein localization
GO:0046982 F protein heterodimerization activity
GO:0050953 P sensory perception of light stimulus
GO:0060122 P inner ear receptor cell stereocilium organization
GO:1990075 C periciliary membrane compartment
GO:1990227 P paranodal junction maintenance
GO:1990696 C USH2 complex
8811 O_BomoIG14168_3prime_partial:A_BomoIG_DN32655_c4_g3_i14
108bp
8812 O_BomoIG14169_complete:A_BomoIG_DN32655_c4_g3_i15
801bp
 whirlin_[Bombyx_mori]
GO:0001895 P retina homeostasis
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0007605 P sensory perception of sound
GO:0030426 C growth cone
GO:0032420 C stereocilium
GO:0042995 C cell projection
GO:0050953 P sensory perception of light stimulus
GO:0060122 P inner ear receptor cell stereocilium organization
8813 O_BomoIG1416_complete:A_BomoIG_DN30205_c1_g5_i1
748bp
 elongation_factor_G,_mitochondrial_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003746 F translation elongation factor activity
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005739 C mitochondrion
GO:0006412 P translation
GO:0006414 P translational elongation
GO:0070125 P mitochondrial translational elongation
8814 O_BomoIG14170_3prime_partial:A_BomoIG_DN32655_c4_g3_i15
108bp
8815 O_BomoIG14171_complete:A_BomoIG_DN32655_c4_g3_i15
103bp
8816 O_BomoIG14172_complete:A_BomoIG_DN32655_c4_g3_i16
774bp
 whirlin_[Bombyx_mori]
GO:0001895 P retina homeostasis
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0007605 P sensory perception of sound
GO:0030426 C growth cone
GO:0032420 C stereocilium
GO:0042995 C cell projection
GO:0050953 P sensory perception of light stimulus
GO:0060122 P inner ear receptor cell stereocilium organization
8817 O_BomoIG14173_3prime_partial:A_BomoIG_DN32655_c4_g3_i16
108bp
8818 O_BomoIG14174_complete:A_BomoIG_DN32655_c4_g6_i9
209bp
 cathepsin_D_precursor_[Bombyx_mori]
GO:0004190 F aspartic-type endopeptidase activity
GO:0005764 C lysosome
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0016787 F hydrolase activity
8819 O_BomoIG14175_complete:A_BomoIG_DN32655_c4_g6_i9
111bp
8820 O_BomoIG14176_complete:A_BomoIG_DN32655_c4_g6_i9
107bp
 cathepsin_D_precursor_[Bombyx_mori]
GO:0004190 F aspartic-type endopeptidase activity
GO:0005764 C lysosome
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0016787 F hydrolase activity
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