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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
8761 O_BomoIG14122_complete:A_BomoIG_DN32647_c0_g2_i7
356bp
 arginine/serine-rich_protein_PNISR_isoform_X1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0008150 P biological_process
GO:0016607 C nuclear speck
GO:0044822 F RNA binding
8762 O_BomoIG14123_complete:A_BomoIG_DN32647_c0_g2_i7
161bp
8763 O_BomoIG14124_3prime_partial:A_BomoIG_DN32647_c0_g2_i8
100bp
 arginine/serine-rich_protein_PNISR_isoform_X1_[Bombyx_mori]
8764 O_BomoIG14125_complete:A_BomoIG_DN32679_c7_g6_i2
135bp
8765 O_BomoIG14126_5prime_partial:A_BomoIG_DN32679_c7_g6_i2
109bp
 TBC1_domain_family_member_24_isoform_X7_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0043547 P positive regulation of GTPase activity
8766 O_BomoIG14127_complete:A_BomoIG_DN32679_c7_g6_i3
135bp
8767 O_BomoIG14128_complete:A_BomoIG_DN32679_c7_g6_i4
135bp
8768 O_BomoIG14129_5prime_partial:A_BomoIG_DN32679_c7_g6_i4
109bp
 TBC1_domain_family_member_24_isoform_X7_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0043547 P positive regulation of GTPase activity
8769 O_BomoIG1412_complete:A_BomoIG_DN30205_c1_g1_i1
320bp
 neuroligin-4,_Y-linked_isoform_X1_[Bombyx_mori]
GO:0002087 P regulation of respiratory gaseous exchange by nervous system process
GO:0004872 F signaling receptor activity
GO:0005515 F protein binding
GO:0005615 C extracellular space
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006898 P receptor-mediated endocytosis
GO:0007155 P cell adhesion
GO:0007158 P neuron cell-cell adhesion
GO:0007416 P synapse assembly
GO:0007612 P learning
GO:0008542 P visual learning
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0030139 C endocytic vesicle
GO:0030425 C dendrite
GO:0030534 P adult behavior
GO:0035176 P social behavior
GO:0042043 F neurexin family protein binding
GO:0043025 C neuronal cell body
GO:0045202 C synapse
GO:0048675 P axon extension
GO:0048709 P oligodendrocyte differentiation
GO:0050804 P modulation of chemical synaptic transmission
GO:0050808 P synapse organization
GO:0050839 F cell adhesion molecule binding
GO:0051965 P positive regulation of synapse assembly
GO:0051966 P regulation of synaptic transmission, glutamatergic
GO:0051968 P positive regulation of synaptic transmission, glutamatergic
GO:0052689 F carboxylic ester hydrolase activity
GO:0060024 P rhythmic synaptic transmission
GO:0060076 C excitatory synapse
GO:0060077 C inhibitory synapse
GO:0060079 P excitatory postsynaptic potential
GO:0060080 P inhibitory postsynaptic potential
GO:0060291 P long-term synaptic potentiation
GO:0060999 P positive regulation of dendritic spine development
GO:0061001 P regulation of dendritic spine morphogenesis
GO:0061002 P negative regulation of dendritic spine morphogenesis
GO:0071625 P vocalization behavior
GO:0090394 P negative regulation of excitatory postsynaptic potential
GO:0097104 P postsynaptic membrane assembly
GO:0097105 P presynaptic membrane assembly
GO:0097110 F scaffold protein binding
GO:0097151 P positive regulation of inhibitory postsynaptic potential
GO:0098794 C postsynapse
GO:1900271 P regulation of long-term synaptic potentiation
GO:1902474 P positive regulation of protein localization to synapse
GO:2000310 P regulation of NMDA receptor activity
GO:2000311 P regulation of AMPA receptor activity
GO:2000331 P regulation of terminal button organization
GO:2000463 P positive regulation of excitatory postsynaptic potential
GO:2000809 P positive regulation of synaptic vesicle clustering
GO:2000969 P positive regulation of AMPA receptor activity
8770 O_BomoIG14130_5prime_partial:A_BomoIG_DN32655_c4_g1_i1
109bp
 inositol_polyphosphate_multikinase_[Bombyx_mori]
8771 O_BomoIG14131_complete:A_BomoIG_DN32655_c4_g3_i1
811bp
 whirlin_[Bombyx_mori]
GO:0001895 P retina homeostasis
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0007605 P sensory perception of sound
GO:0030426 C growth cone
GO:0032420 C stereocilium
GO:0042995 C cell projection
GO:0050953 P sensory perception of light stimulus
GO:0060122 P inner ear receptor cell stereocilium organization
8772 O_BomoIG14132_5prime_partial:A_BomoIG_DN32655_c4_g3_i1
120bp
8773 O_BomoIG14133_complete:A_BomoIG_DN32655_c4_g3_i2
838bp
 whirlin_[Bombyx_mori]
GO:0001895 P retina homeostasis
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0007605 P sensory perception of sound
GO:0030426 C growth cone
GO:0032420 C stereocilium
GO:0042995 C cell projection
GO:0050953 P sensory perception of light stimulus
GO:0060122 P inner ear receptor cell stereocilium organization
8774 O_BomoIG14134_complete:A_BomoIG_DN32655_c4_g3_i2
154bp
8775 O_BomoIG14135_3prime_partial:A_BomoIG_DN32655_c4_g3_i2
108bp
8776 O_BomoIG14136_complete:A_BomoIG_DN32655_c4_g3_i3
159bp
 whirlin_[Bombyx_mori]
GO:0001895 P retina homeostasis
GO:0001917 C photoreceptor inner segment
GO:0002141 C stereocilia ankle link
GO:0002142 C stereocilia ankle link complex
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005884 C actin filament
GO:0005929 C cilium
GO:0007605 P sensory perception of sound
GO:0010628 P positive regulation of gene expression
GO:0021694 P cerebellar Purkinje cell layer formation
GO:0030426 C growth cone
GO:0032391 C photoreceptor connecting cilium
GO:0032420 C stereocilium
GO:0032421 C stereocilium bundle
GO:0032426 C stereocilium tip
GO:0036064 C ciliary basal body
GO:0042803 F protein homodimerization activity
GO:0042995 C cell projection
GO:0045184 P establishment of protein localization
GO:0046982 F protein heterodimerization activity
GO:0050953 P sensory perception of light stimulus
GO:0060122 P inner ear receptor cell stereocilium organization
GO:1990075 C periciliary membrane compartment
GO:1990227 P paranodal junction maintenance
GO:1990696 C USH2 complex
8777 O_BomoIG14137_complete:A_BomoIG_DN32655_c4_g6_i1
362bp
 cathepsin_D_precursor_[Bombyx_mori]
GO:0004190 F aspartic-type endopeptidase activity
GO:0005764 C lysosome
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0016787 F hydrolase activity
8778 O_BomoIG14138_complete:A_BomoIG_DN32655_c4_g6_i1
128bp
8779 O_BomoIG14139_complete:A_BomoIG_DN32655_c4_g6_i1
112bp
8780 O_BomoIG1413_3prime_partial:A_BomoIG_DN30205_c1_g2_i1
419bp
 neuroligin-4,_Y-linked_isoform_X2_[Bombyx_mori]
GO:0004872 F signaling receptor activity
GO:0005515 F protein binding
GO:0005615 C extracellular space
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007158 P neuron cell-cell adhesion
GO:0007416 P synapse assembly
GO:0007612 P learning
GO:0009986 C cell surface
GO:0014069 C postsynaptic density
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0035176 P social behavior
GO:0042043 F neurexin family protein binding
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0050804 P modulation of chemical synaptic transmission
GO:0050808 P synapse organization
GO:0050839 F cell adhesion molecule binding
GO:0052689 F carboxylic ester hydrolase activity
GO:0071625 P vocalization behavior
GO:0097110 F scaffold protein binding
8781 O_BomoIG14140_complete:A_BomoIG_DN32655_c4_g3_i4
224bp
 Whirlin_[Papilio_machaon]
GO:0001895 P retina homeostasis
GO:0001917 C photoreceptor inner segment
GO:0002141 C stereocilia ankle link
GO:0002142 C stereocilia ankle link complex
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005884 C actin filament
GO:0005929 C cilium
GO:0007605 P sensory perception of sound
GO:0010628 P positive regulation of gene expression
GO:0021694 P cerebellar Purkinje cell layer formation
GO:0030426 C growth cone
GO:0032391 C photoreceptor connecting cilium
GO:0032420 C stereocilium
GO:0032421 C stereocilium bundle
GO:0032426 C stereocilium tip
GO:0036064 C ciliary basal body
GO:0042803 F protein homodimerization activity
GO:0042995 C cell projection
GO:0045184 P establishment of protein localization
GO:0046982 F protein heterodimerization activity
GO:0050953 P sensory perception of light stimulus
GO:0060122 P inner ear receptor cell stereocilium organization
GO:1990075 C periciliary membrane compartment
GO:1990227 P paranodal junction maintenance
GO:1990696 C USH2 complex
8782 O_BomoIG14141_complete:A_BomoIG_DN32655_c4_g3_i5
787bp
 whirlin_[Bombyx_mori]
GO:0001895 P retina homeostasis
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0007605 P sensory perception of sound
GO:0030426 C growth cone
GO:0032420 C stereocilium
GO:0042995 C cell projection
GO:0050953 P sensory perception of light stimulus
GO:0060122 P inner ear receptor cell stereocilium organization
8783 O_BomoIG14142_3prime_partial:A_BomoIG_DN32655_c4_g3_i5
108bp
8784 O_BomoIG14143_complete:A_BomoIG_DN32655_c4_g3_i5
103bp
8785 O_BomoIG14144_complete:A_BomoIG_DN32655_c4_g6_i3
112bp
8786 O_BomoIG14145_complete:A_BomoIG_DN32655_c4_g3_i6
591bp
 whirlin_[Bombyx_mori]
GO:0001895 P retina homeostasis
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0007605 P sensory perception of sound
GO:0030426 C growth cone
GO:0032420 C stereocilium
GO:0042995 C cell projection
GO:0050953 P sensory perception of light stimulus
GO:0060122 P inner ear receptor cell stereocilium organization
8787 O_BomoIG14146_complete:A_BomoIG_DN32655_c4_g3_i6
159bp
 whirlin_[Bombyx_mori]
GO:0001895 P retina homeostasis
GO:0001917 C photoreceptor inner segment
GO:0002141 C stereocilia ankle link
GO:0002142 C stereocilia ankle link complex
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005884 C actin filament
GO:0005929 C cilium
GO:0007605 P sensory perception of sound
GO:0010628 P positive regulation of gene expression
GO:0021694 P cerebellar Purkinje cell layer formation
GO:0030426 C growth cone
GO:0032391 C photoreceptor connecting cilium
GO:0032420 C stereocilium
GO:0032421 C stereocilium bundle
GO:0032426 C stereocilium tip
GO:0036064 C ciliary basal body
GO:0042803 F protein homodimerization activity
GO:0042995 C cell projection
GO:0045184 P establishment of protein localization
GO:0046982 F protein heterodimerization activity
GO:0050953 P sensory perception of light stimulus
GO:0060122 P inner ear receptor cell stereocilium organization
GO:1990075 C periciliary membrane compartment
GO:1990227 P paranodal junction maintenance
GO:1990696 C USH2 complex
8788 O_BomoIG14147_complete:A_BomoIG_DN32655_c4_g3_i6
119bp
8789 O_BomoIG14148_3prime_partial:A_BomoIG_DN32655_c4_g3_i6
108bp
8790 O_BomoIG14149_complete:A_BomoIG_DN32655_c4_g6_i4
114bp
 cathepsin_D_[Bombyx_mori]
GO:0004190 F aspartic-type endopeptidase activity
GO:0005764 C lysosome
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0016787 F hydrolase activity
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