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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
8371 O_BomoIG13772_5prime_partial:A_BomoIG_DN29617_c0_g2_i3
167bp
8372 O_BomoIG13773_complete:A_BomoIG_DN29644_c0_g3_i1
250bp
 lachesin_isoform_X2_[Bombyx_mori]
GO:0005886 C plasma membrane
GO:0007155 P cell adhesion
GO:0016020 C membrane
GO:0031225 C anchored component of membrane
8373 O_BomoIG13774_complete:A_BomoIG_DN29644_c0_g3_i2
137bp
 lachesin-like_isoform_X1_[Helicoverpa_armigera]
GO:0004714 F transmembrane receptor protein tyrosine kinase activity
GO:0005886 C plasma membrane
GO:0007155 P cell adhesion
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0016020 C membrane
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0031225 C anchored component of membrane
8374 O_BomoIG13775_complete:A_BomoIG_DN29644_c0_g3_i3
405bp
 lachesin_isoform_X2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005918 C septate junction
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007275 P multicellular organism development
GO:0007424 P open tracheal system development
GO:0016020 C membrane
GO:0016331 P morphogenesis of embryonic epithelium
GO:0019898 C extrinsic component of membrane
GO:0019991 P septate junction assembly
GO:0031225 C anchored component of membrane
GO:0035151 P regulation of tube size, open tracheal system
GO:0035160 P maintenance of epithelial integrity, open tracheal system
GO:0042803 F protein homodimerization activity
GO:0061343 P cell adhesion involved in heart morphogenesis
8375 O_BomoIG13776_complete:A_BomoIG_DN29644_c0_g3_i4
259bp
 lachesin_isoform_X1_[Bombyx_mori]
GO:0005886 C plasma membrane
GO:0007155 P cell adhesion
GO:0016020 C membrane
GO:0031225 C anchored component of membrane
8376 O_BomoIG13777_complete:A_BomoIG_DN29644_c0_g3_i5
414bp
 lachesin_isoform_X1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005918 C septate junction
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007275 P multicellular organism development
GO:0007424 P open tracheal system development
GO:0016020 C membrane
GO:0016331 P morphogenesis of embryonic epithelium
GO:0019898 C extrinsic component of membrane
GO:0019991 P septate junction assembly
GO:0031225 C anchored component of membrane
GO:0035151 P regulation of tube size, open tracheal system
GO:0035160 P maintenance of epithelial integrity, open tracheal system
GO:0042803 F protein homodimerization activity
GO:0061343 P cell adhesion involved in heart morphogenesis
8377 O_BomoIG13778_complete:A_BomoIG_DN29602_c0_g1_i1
378bp
 E3_ubiquitin-protein_ligase_RING1_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0031519 C PcG protein complex
GO:0035102 C PRC1 complex
GO:0036353 P histone H2A-K119 monoubiquitination
GO:0046872 F metal ion binding
GO:0071339 C MLL1 complex
8378 O_BomoIG13779_complete:A_BomoIG_DN29602_c0_g1_i2
374bp
 E3_ubiquitin-protein_ligase_RING1_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0031519 C PcG protein complex
GO:0035102 C PRC1 complex
GO:0036353 P histone H2A-K119 monoubiquitination
GO:0046872 F metal ion binding
GO:0071339 C MLL1 complex
8379 O_BomoIG1377_complete:A_BomoIG_DN30253_c4_g3_i8
467bp
 ubiquilin-1_isoform_X1_[Bombyx_mori]
GO:0000502 C proteasome complex
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005776 C autophagosome
GO:0005783 C endoplasmic reticulum
GO:0005886 C plasma membrane
GO:0006914 P autophagy
GO:0016020 C membrane
GO:0016235 C aggresome
GO:0016241 P regulation of macroautophagy
GO:0019900 F kinase binding
GO:0030433 P ubiquitin-dependent ERAD pathway
GO:0031396 P regulation of protein ubiquitination
GO:0031398 P positive regulation of protein ubiquitination
GO:0031410 C cytoplasmic vesicle
GO:0031593 F polyubiquitin modification-dependent protein binding
GO:0034140 P negative regulation of toll-like receptor 3 signaling pathway
GO:0034976 P response to endoplasmic reticulum stress
GO:0035973 P aggrephagy
GO:0042802 F identical protein binding
GO:0043234 C protein-containing complex
GO:0048471 C perinuclear region of cytoplasm
GO:0071456 P cellular response to hypoxia
GO:1901097 P negative regulation of autophagosome maturation
GO:1901340 P negative regulation of store-operated calcium channel activity
GO:1902175 P regulation of oxidative stress-induced intrinsic apoptotic signaling pathway
GO:1903071 P positive regulation of ER-associated ubiquitin-dependent protein catabolic process
GO:2000785 P regulation of autophagosome assembly
8380 O_BomoIG13780_complete:A_BomoIG_DN29602_c0_g1_i3
273bp
 E3_ubiquitin-protein_ligase_RING1_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005730 C nucleolus
GO:0006342 P heterochromatin assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007049 P cell cycle
GO:0007062 P sister chromatid cohesion
GO:0007275 P multicellular organism development
GO:0007419 P ventral cord development
GO:0008270 F zinc ion binding
GO:0008278 C cohesin complex
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0022008 P neurogenesis
GO:0030708 P germarium-derived female germ-line cyst encapsulation
GO:0030713 P ovarian follicle cell stalk formation
GO:0031519 C PcG protein complex
GO:0035102 C PRC1 complex
GO:0035518 P histone H2A monoubiquitination
GO:0045498 P sex comb development
GO:0046872 F metal ion binding
GO:0051321 P meiotic cell cycle
8381 O_BomoIG13781_complete:A_BomoIG_DN29602_c0_g1_i3
138bp
 E3_ubiquitin-protein_ligase_RING1_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005730 C nucleolus
GO:0006342 P heterochromatin assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007049 P cell cycle
GO:0007062 P sister chromatid cohesion
GO:0007275 P multicellular organism development
GO:0007419 P ventral cord development
GO:0008270 F zinc ion binding
GO:0008278 C cohesin complex
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0022008 P neurogenesis
GO:0030708 P germarium-derived female germ-line cyst encapsulation
GO:0030713 P ovarian follicle cell stalk formation
GO:0031519 C PcG protein complex
GO:0035102 C PRC1 complex
GO:0035518 P histone H2A monoubiquitination
GO:0045498 P sex comb development
GO:0046872 F metal ion binding
GO:0051321 P meiotic cell cycle
8382 O_BomoIG13782_5prime_partial:A_BomoIG_DN29628_c1_g1_i2
120bp
 uncharacterized_protein_LOC105842439_[Bombyx_mori]
8383 O_BomoIG13783_3prime_partial:A_BomoIG_DN29658_c0_g1_i1
462bp
 uncharacterized_protein_LOC101741429_[Bombyx_mori]
8384 O_BomoIG13784_internal:A_BomoIG_DN29658_c0_g2_i1
163bp
 uncharacterized_protein_LOC101741429_[Bombyx_mori]
8385 O_BomoIG13785_internal:A_BomoIG_DN29634_c0_g1_i1
213bp
 hemicentin-1-like_isoform_X2_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0050896 P response to stimulus
8386 O_BomoIG13786_5prime_partial:A_BomoIG_DN29634_c0_g1_i1
179bp
8387 O_BomoIG13787_internal:A_BomoIG_DN29634_c0_g1_i2
323bp
 hemicentin-1-like_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007224 P smoothened signaling pathway
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0045663 P positive regulation of myoblast differentiation
GO:0045664 P regulation of neuron differentiation
GO:0048598 P embryonic morphogenesis
8388 O_BomoIG13788_complete:A_BomoIG_DN29634_c0_g1_i2
181bp
8389 O_BomoIG13789_complete:A_BomoIG_DN29625_c0_g1_i1
409bp
 DnaJ_(Hsp40)_homolog_1_[Bombyx_mori]
GO:0005524 F ATP binding
GO:0005829 C cytosol
GO:0006457 P protein folding
GO:0009408 P response to heat
GO:0016020 C membrane
GO:0031072 F heat shock protein binding
GO:0042026 P protein refolding
GO:0046872 F metal ion binding
GO:0051082 F unfolded protein binding
GO:0051087 F chaperone binding
GO:0070062 C extracellular exosome
8390 O_BomoIG1378_complete:A_BomoIG_DN30253_c4_g3_i8
113bp
8391 O_BomoIG13790_complete:A_BomoIG_DN29625_c0_g1_i2
314bp
 DnaJ_(Hsp40)_homolog_1_[Bombyx_mori]
GO:0005524 F ATP binding
GO:0005829 C cytosol
GO:0006457 P protein folding
GO:0009408 P response to heat
GO:0016020 C membrane
GO:0031072 F heat shock protein binding
GO:0042026 P protein refolding
GO:0046872 F metal ion binding
GO:0051082 F unfolded protein binding
GO:0051087 F chaperone binding
GO:0070062 C extracellular exosome
8392 O_BomoIG13791_complete:A_BomoIG_DN29625_c0_g1_i3
409bp
 DnaJ_(Hsp40)_homolog_1_[Bombyx_mori]
GO:0005524 F ATP binding
GO:0005829 C cytosol
GO:0006457 P protein folding
GO:0009408 P response to heat
GO:0016020 C membrane
GO:0031072 F heat shock protein binding
GO:0042026 P protein refolding
GO:0046872 F metal ion binding
GO:0051082 F unfolded protein binding
GO:0051087 F chaperone binding
GO:0070062 C extracellular exosome
8393 O_BomoIG13792_internal:A_BomoIG_DN29670_c0_g1_i1
730bp
 dedicator_of_cytokinesis_protein_3_isoform_X1_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0007264 P small GTPase mediated signal transduction
GO:0016020 C membrane
GO:0017124 F SH3 domain binding
GO:0030165 F PDZ domain binding
GO:0030971 F receptor tyrosine kinase binding
GO:0032420 C stereocilium
GO:0032421 C stereocilium bundle
GO:0042995 C cell projection
GO:0043547 P positive regulation of GTPase activity
GO:0048365 F small GTPase binding
GO:0060326 P cell chemotaxis
GO:1904694 P negative regulation of vascular associated smooth muscle contraction
GO:1904754 P positive regulation of vascular associated smooth muscle cell migration
8394 O_BomoIG13793_complete:A_BomoIG_DN29670_c0_g1_i1
207bp
8395 O_BomoIG13794_5prime_partial:A_BomoIG_DN29670_c0_g1_i1
123bp
8396 O_BomoIG13795_internal:A_BomoIG_DN29670_c0_g1_i2
724bp
 dedicator_of_cytokinesis_protein_3_isoform_X2_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0007264 P small GTPase mediated signal transduction
GO:0016020 C membrane
GO:0017124 F SH3 domain binding
GO:0030165 F PDZ domain binding
GO:0030971 F receptor tyrosine kinase binding
GO:0032420 C stereocilium
GO:0032421 C stereocilium bundle
GO:0042995 C cell projection
GO:0043547 P positive regulation of GTPase activity
GO:0048365 F small GTPase binding
GO:0060326 P cell chemotaxis
GO:1904694 P negative regulation of vascular associated smooth muscle contraction
GO:1904754 P positive regulation of vascular associated smooth muscle cell migration
8397 O_BomoIG13796_complete:A_BomoIG_DN29670_c0_g1_i2
207bp
8398 O_BomoIG13797_5prime_partial:A_BomoIG_DN29670_c0_g1_i2
123bp
8399 O_BomoIG13798_5prime_partial:A_BomoIG_DN29670_c0_g1_i3
542bp
 dedicator_of_cytokinesis_protein_3_isoform_X1_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0007264 P small GTPase mediated signal transduction
GO:0016020 C membrane
GO:0017124 F SH3 domain binding
GO:0030165 F PDZ domain binding
GO:0030971 F receptor tyrosine kinase binding
GO:0032420 C stereocilium
GO:0032421 C stereocilium bundle
GO:0042995 C cell projection
GO:0043547 P positive regulation of GTPase activity
GO:0048365 F small GTPase binding
GO:0060326 P cell chemotaxis
GO:1904694 P negative regulation of vascular associated smooth muscle contraction
GO:1904754 P positive regulation of vascular associated smooth muscle cell migration
8400 O_BomoIG13799_complete:A_BomoIG_DN29670_c0_g1_i3
117bp
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