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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
8341 O_BomoIG13745_3prime_partial:A_BomoIG_DN29618_c0_g1_i5
123bp
8342 O_BomoIG13746_5prime_partial:A_BomoIG_DN29618_c0_g1_i5
111bp
 hypothetical_protein_T10_11150,_partial_[Trichinella_papuae]
8343 O_BomoIG13747_5prime_partial:A_BomoIG_DN29618_c0_g1_i6
247bp
8344 O_BomoIG13748_3prime_partial:A_BomoIG_DN29618_c0_g1_i6
205bp
 splicing_factor_1_[Helicoverpa_armigera]
GO:0000245 P spliceosomal complex assembly
GO:0000389 P mRNA 3'-splice site recognition
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003714 F transcription corepressor activity
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005840 C ribosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0030238 P male sex determination
GO:0033327 P Leydig cell differentiation
GO:0042802 F identical protein binding
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0048662 P negative regulation of smooth muscle cell proliferation
GO:0050810 P regulation of steroid biosynthetic process
GO:1903507 P negative regulation of nucleic acid-templated transcription
8345 O_BomoIG13749_5prime_partial:A_BomoIG_DN29618_c0_g1_i6
111bp
 hypothetical_protein_T10_11150,_partial_[Trichinella_papuae]
8346 O_BomoIG1374_complete:A_BomoIG_DN30253_c4_g4_i2
512bp
 protein_halfway_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005622 C intracellular anatomical structure
GO:0035073 P pupariation
GO:0035075 P response to ecdysone
GO:0035556 P intracellular signal transduction
8347 O_BomoIG13750_3prime_partial:A_BomoIG_DN29604_c0_g1_i1
1059bp
 PREDICTED:_ankyrin_repeat_domain-containing_protein_50_isoform_X2_[Papilio_polytes]
GO:0005515 F protein binding
GO:0005768 C endosome
GO:0006810 P transport
GO:0015031 P protein transport
GO:1990126 P endocytic recycling
8348 O_BomoIG13751_complete:A_BomoIG_DN29604_c0_g1_i1
214bp
8349 O_BomoIG13752_complete:A_BomoIG_DN29604_c0_g1_i1
188bp
8350 O_BomoIG13753_complete:A_BomoIG_DN29604_c0_g1_i1
107bp
8351 O_BomoIG13754_internal:A_BomoIG_DN29604_c0_g2_i1
160bp
 hypothetical_protein_OIDMADRAFT_116352,_partial_[Oidiodendron_maius_Zn]
8352 O_BomoIG13755_internal:A_BomoIG_DN29604_c0_g2_i1
159bp
 LOW_QUALITY_PROTEIN:_ankyrin_repeat_domain-containing_protein_50_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005768 C endosome
GO:0006810 P transport
GO:0015031 P protein transport
GO:1990126 P endocytic recycling
8353 O_BomoIG13756_internal:A_BomoIG_DN29604_c0_g2_i1
159bp
8354 O_BomoIG13757_internal:A_BomoIG_DN29604_c0_g2_i2
128bp
 hypothetical_protein_BA78_8856_[Aspergillus_fumigatus_var._RP-2014]
8355 O_BomoIG13758_internal:A_BomoIG_DN29604_c0_g2_i2
127bp
 LOW_QUALITY_PROTEIN:_ankyrin_repeat_domain-containing_protein_50_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005768 C endosome
GO:0006810 P transport
GO:0015031 P protein transport
GO:1990126 P endocytic recycling
8356 O_BomoIG13759_5prime_partial:A_BomoIG_DN29604_c0_g2_i2
127bp
8357 O_BomoIG1375_complete:A_BomoIG_DN30253_c4_g4_i2
158bp
8358 O_BomoIG13760_internal:A_BomoIG_DN29675_c0_g1_i1
118bp
8359 O_BomoIG13761_5prime_partial:A_BomoIG_DN29675_c0_g1_i1
117bp
 GDNF-inducible_zinc_finger_protein_1_isoform_X1_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0008630 P intrinsic apoptotic signaling pathway in response to DNA damage
GO:0030178 P negative regulation of Wnt signaling pathway
GO:0042826 F histone deacetylase binding
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
8360 O_BomoIG13762_internal:A_BomoIG_DN29675_c0_g1_i2
449bp
 GDNF-inducible_zinc_finger_protein_1_isoform_X2_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000980 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0001206 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0001658 P branching involved in ureteric bud morphogenesis
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0043565 F sequence-specific DNA binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
8361 O_BomoIG13763_complete:A_BomoIG_DN29675_c0_g1_i2
113bp
8362 O_BomoIG13764_3prime_partial:A_BomoIG_DN29675_c0_g1_i3
320bp
 GDNF-inducible_zinc_finger_protein_1_isoform_X1_[Bombyx_mori]
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
8363 O_BomoIG13765_complete:A_BomoIG_DN29675_c0_g1_i3
113bp
8364 O_BomoIG13766_3prime_partial:A_BomoIG_DN29675_c0_g1_i4
516bp
 GDNF-inducible_zinc_finger_protein_1_isoform_X1_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000980 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0001206 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0001658 P branching involved in ureteric bud morphogenesis
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0043565 F sequence-specific DNA binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
8365 O_BomoIG13767_complete:A_BomoIG_DN29675_c0_g1_i4
113bp
8366 O_BomoIG13768_complete:A_BomoIG_DN29653_c0_g1_i1
155bp
 superoxide_dismutase_[Cu-Zn]_[Bombyx_mori]
GO:0004784 F superoxide dismutase activity
GO:0005737 C cytoplasm
GO:0006801 P superoxide metabolic process
GO:0016209 F antioxidant activity
GO:0016491 F oxidoreductase activity
GO:0019430 P removal of superoxide radicals
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
GO:0098869 P cellular oxidant detoxification
8367 O_BomoIG13769_5prime_partial:A_BomoIG_DN29617_c0_g2_i1
109bp
8368 O_BomoIG1376_complete:A_BomoIG_DN30253_c4_g4_i2
123bp
8369 O_BomoIG13770_complete:A_BomoIG_DN29617_c0_g2_i2
155bp
 DNA-directed_RNA_polymerase_III_subunit_RPC4_[Bombyx_mori]
8370 O_BomoIG13771_3prime_partial:A_BomoIG_DN29617_c0_g2_i3
351bp
 DNA-directed_RNA_polymerase_III_subunit_RPC4_[Bombyx_mori]
GO:0001056 F RNA polymerase III activity
GO:0002376 P immune system process
GO:0003677 F DNA binding
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005634 C nucleus
GO:0005666 C RNA polymerase III complex
GO:0006383 P transcription by RNA polymerase III
GO:0032728 P positive regulation of interferon-beta production
GO:0045087 P innate immune response
GO:0045089 P positive regulation of innate immune response
GO:0051607 P defense response to virus
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