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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
8101 O_BomoIG13529_3prime_partial:A_BomoIG_DN29641_c0_g1_i2
170bp
 reverse_transcriptase_[Bombyx_mori]
8102 O_BomoIG1352_internal:A_BomoIG_DN30250_c3_g1_i4
295bp
 MICAL-like_protein_1_isoform_X1_[Bombyx_mori]
GO:0005768 C endosome
GO:0005770 C late endosome
GO:0006612 P protein targeting to membrane
GO:0006810 P transport
GO:0006897 P endocytosis
GO:0006898 P receptor-mediated endocytosis
GO:0008270 F zinc ion binding
GO:0010008 C endosome membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0017137 F small GTPase binding
GO:0019898 C extrinsic component of membrane
GO:0031175 P neuron projection development
GO:0031902 C late endosome membrane
GO:0032456 P endocytic recycling
GO:0032458 P slow endocytic recycling
GO:0036010 P protein localization to endosome
GO:0042802 F identical protein binding
GO:0046872 F metal ion binding
GO:0055038 C recycling endosome membrane
GO:0070300 F phosphatidic acid binding
GO:0097320 P plasma membrane tubulation
GO:1990090 P cellular response to nerve growth factor stimulus
GO:1990126 P endocytic recycling
8103 O_BomoIG13530_3prime_partial:A_BomoIG_DN29641_c0_g1_i3
242bp
 reverse_transcriptase_[Bombyx_mori]
8104 O_BomoIG13531_5prime_partial:A_BomoIG_DN29641_c0_g1_i3
152bp
8105 O_BomoIG13532_3prime_partial:A_BomoIG_DN29641_c0_g1_i4
188bp
 reverse_transcriptase_[Bombyx_mori]
8106 O_BomoIG13533_complete:A_BomoIG_DN29637_c0_g1_i1
592bp
 BTB/POZ_domain_containing_protein_isoform_X1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007399 P nervous system development
GO:0021987 P cerebral cortex development
GO:0048813 P dendrite morphogenesis
8107 O_BomoIG13534_5prime_partial:A_BomoIG_DN29637_c0_g2_i1
101bp
 hypothetical_protein_RP20_CCG018166_[Aedes_albopictus]
GO:0000932 C P-body
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005737 C cytoplasm
GO:0008150 P biological_process
8108 O_BomoIG13535_complete:A_BomoIG_DN29637_c0_g1_i2
427bp
 BTB/POZ_domain_containing_protein_isoform_X6_[Bombyx_mori]
GO:0000932 C P-body
GO:0005737 C cytoplasm
8109 O_BomoIG13536_complete:A_BomoIG_DN29637_c0_g1_i3
616bp
 BTB/POZ_domain_containing_protein_isoform_X1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007399 P nervous system development
GO:0021987 P cerebral cortex development
GO:0048813 P dendrite morphogenesis
8110 O_BomoIG13537_complete:A_BomoIG_DN29637_c0_g1_i4
536bp
 BTB/POZ_domain_containing_protein_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007399 P nervous system development
GO:0021987 P cerebral cortex development
GO:0048813 P dendrite morphogenesis
8111 O_BomoIG13538_5prime_partial:A_BomoIG_DN29637_c0_g1_i5
572bp
 BTB/POZ_domain_containing_protein_isoform_X3_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007399 P nervous system development
GO:0021987 P cerebral cortex development
GO:0048813 P dendrite morphogenesis
8112 O_BomoIG13539_complete:A_BomoIG_DN29637_c0_g1_i6
388bp
 BTB/POZ_domain_containing_protein_isoform_X5_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007399 P nervous system development
GO:0021987 P cerebral cortex development
GO:0048813 P dendrite morphogenesis
8113 O_BomoIG1353_complete:A_BomoIG_DN30250_c3_g1_i4
151bp
8114 O_BomoIG13540_complete:A_BomoIG_DN29637_c0_g1_i7
558bp
 BTB/POZ_domain_containing_protein_isoform_X3_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007399 P nervous system development
GO:0021987 P cerebral cortex development
GO:0048813 P dendrite morphogenesis
8115 O_BomoIG13541_complete:A_BomoIG_DN29689_c0_g1_i1
106bp
 hypothetical_protein_ALC62_14446_[Cyphomyrmex_costatus]
8116 O_BomoIG13542_complete:A_BomoIG_DN29689_c0_g1_i2
106bp
 hypothetical_protein_ALC62_14446_[Cyphomyrmex_costatus]
8117 O_BomoIG13543_complete:A_BomoIG_DN29691_c0_g1_i1
352bp
 retinol_dehydrogenase_11_[Bombyx_mori]
GO:0001523 P retinoid metabolic process
GO:0001917 C photoreceptor inner segment
GO:0004745 F NAD-retinol dehydrogenase activity
GO:0005622 C intracellular anatomical structure
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016062 P adaptation of rhodopsin mediated signaling
GO:0016491 F oxidoreductase activity
GO:0016616 F oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0042572 P retinol metabolic process
GO:0042574 P retinal metabolic process
GO:0052650 F NADP-retinol dehydrogenase activity
GO:0055114 P obsolete oxidation-reduction process
8118 O_BomoIG13544_3prime_partial:A_BomoIG_DN29691_c0_g1_i2
313bp
 retinol_dehydrogenase_11_[Bombyx_mori]
GO:0001523 P retinoid metabolic process
GO:0001917 C photoreceptor inner segment
GO:0004745 F NAD-retinol dehydrogenase activity
GO:0005622 C intracellular anatomical structure
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016062 P adaptation of rhodopsin mediated signaling
GO:0016491 F oxidoreductase activity
GO:0016616 F oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0042572 P retinol metabolic process
GO:0042574 P retinal metabolic process
GO:0052650 F NADP-retinol dehydrogenase activity
GO:0055114 P obsolete oxidation-reduction process
8119 O_BomoIG13545_complete:A_BomoIG_DN29691_c0_g1_i3
274bp
 retinol_dehydrogenase_11_[Bombyx_mori]
GO:0005516 F calmodulin binding
GO:0006810 P transport
GO:0008152 P metabolic process
GO:0009507 C chloroplast
GO:0009528 C plastid inner membrane
GO:0009536 C plastid
GO:0009706 C chloroplast inner membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
8120 O_BomoIG13546_complete:A_BomoIG_DN29691_c0_g1_i4
274bp
 retinol_dehydrogenase_11_[Bombyx_mori]
GO:0005516 F calmodulin binding
GO:0006810 P transport
GO:0008152 P metabolic process
GO:0009507 C chloroplast
GO:0009528 C plastid inner membrane
GO:0009536 C plastid
GO:0009706 C chloroplast inner membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
8121 O_BomoIG13547_complete:A_BomoIG_DN29691_c0_g1_i5
352bp
 retinol_dehydrogenase_11_[Bombyx_mori]
GO:0001523 P retinoid metabolic process
GO:0001917 C photoreceptor inner segment
GO:0004745 F NAD-retinol dehydrogenase activity
GO:0005622 C intracellular anatomical structure
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016062 P adaptation of rhodopsin mediated signaling
GO:0016491 F oxidoreductase activity
GO:0016616 F oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0042572 P retinol metabolic process
GO:0042574 P retinal metabolic process
GO:0052650 F NADP-retinol dehydrogenase activity
GO:0055114 P obsolete oxidation-reduction process
8122 O_BomoIG13548_3prime_partial:A_BomoIG_DN29691_c0_g1_i6
216bp
 retinol_dehydrogenase_11_[Bombyx_mori]
GO:0001523 P retinoid metabolic process
GO:0001917 C photoreceptor inner segment
GO:0004745 F NAD-retinol dehydrogenase activity
GO:0005622 C intracellular anatomical structure
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016062 P adaptation of rhodopsin mediated signaling
GO:0016491 F oxidoreductase activity
GO:0016616 F oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0042572 P retinol metabolic process
GO:0042574 P retinal metabolic process
GO:0052650 F NADP-retinol dehydrogenase activity
GO:0055114 P obsolete oxidation-reduction process
8123 O_BomoIG13549_3prime_partial:A_BomoIG_DN29691_c0_g1_i7
313bp
 retinol_dehydrogenase_11_[Bombyx_mori]
GO:0001523 P retinoid metabolic process
GO:0001917 C photoreceptor inner segment
GO:0004745 F NAD-retinol dehydrogenase activity
GO:0005622 C intracellular anatomical structure
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016062 P adaptation of rhodopsin mediated signaling
GO:0016491 F oxidoreductase activity
GO:0016616 F oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0042572 P retinol metabolic process
GO:0042574 P retinal metabolic process
GO:0052650 F NADP-retinol dehydrogenase activity
GO:0055114 P obsolete oxidation-reduction process
8124 O_BomoIG1354_complete:A_BomoIG_DN30221_c0_g1_i1
416bp
 ETS-like_protein_pointed_isoform_X3_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0001501 P skeletal system development
GO:0001712 P ectodermal cell fate commitment
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007498 P mesoderm development
GO:0030154 P cell differentiation
GO:0035259 F glucocorticoid receptor binding
GO:0043565 F sequence-specific DNA binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0090009 P primitive streak formation
8125 O_BomoIG13550_3prime_partial:A_BomoIG_DN29691_c0_g1_i8
216bp
 retinol_dehydrogenase_11_[Bombyx_mori]
GO:0001523 P retinoid metabolic process
GO:0001917 C photoreceptor inner segment
GO:0004745 F NAD-retinol dehydrogenase activity
GO:0005622 C intracellular anatomical structure
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016062 P adaptation of rhodopsin mediated signaling
GO:0016491 F oxidoreductase activity
GO:0016616 F oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0042572 P retinol metabolic process
GO:0042574 P retinal metabolic process
GO:0052650 F NADP-retinol dehydrogenase activity
GO:0055114 P obsolete oxidation-reduction process
8126 O_BomoIG13551_complete:A_BomoIG_DN29685_c0_g1_i1
304bp
 pre-mRNA-splicing_regulator_female-lethal(2)D_[Bombyx_mori]
GO:0000375 P RNA splicing, via transesterification reactions
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0007275 P multicellular organism development
GO:0007530 P sex determination
GO:0007539 P primary sex determination, soma
GO:0008380 P RNA splicing
GO:0019099 P female germ-line sex determination
GO:0046331 P lateral inhibition
GO:0048024 P regulation of mRNA splicing, via spliceosome
GO:0048749 P compound eye development
GO:0080009 P mRNA methylation
8127 O_BomoIG13552_complete:A_BomoIG_DN29685_c0_g1_i1
124bp
8128 O_BomoIG13553_complete:A_BomoIG_DN29685_c0_g1_i2
131bp
 pre-mRNA-splicing_regulator_female-lethal(2)D_[Bombyx_mori]
GO:0000375 P RNA splicing, via transesterification reactions
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0007275 P multicellular organism development
GO:0008380 P RNA splicing
GO:0048024 P regulation of mRNA splicing, via spliceosome
8129 O_BomoIG13554_complete:A_BomoIG_DN29685_c0_g1_i2
124bp
8130 O_BomoIG13555_complete:A_BomoIG_DN29685_c0_g1_i5
131bp
 pre-mRNA-splicing_regulator_female-lethal(2)D_[Bombyx_mori]
GO:0000375 P RNA splicing, via transesterification reactions
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0007275 P multicellular organism development
GO:0008380 P RNA splicing
GO:0048024 P regulation of mRNA splicing, via spliceosome
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