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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
8071 O_BomoIG13501_complete:A_BomoIG_DN29633_c0_g1_i6
409bp
 ATP-dependent_RNA_helicase_SUV3_homolog,_mitochondrial_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0032508 P DNA duplex unwinding
8072 O_BomoIG13502_3prime_partial:A_BomoIG_DN29633_c0_g1_i6
340bp
 ATP-dependent_RNA_helicase_SUV3_homolog,_mitochondrial_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000963 P mitochondrial RNA processing
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006119 P oxidative phosphorylation
GO:0016787 F hydrolase activity
GO:0016817 F hydrolase activity, acting on acid anhydrides
GO:0022904 P respiratory electron transport chain
GO:0032508 P DNA duplex unwinding
GO:0044528 P regulation of mitochondrial mRNA stability
GO:0070131 P positive regulation of mitochondrial translation
GO:0090646 P mitochondrial tRNA processing
GO:0097222 P mitochondrial mRNA polyadenylation
8073 O_BomoIG13503_5prime_partial:A_BomoIG_DN29610_c0_g1_i1
818bp
 KDM4_isoform_X1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016491 F oxidoreductase activity
GO:0016568 P chromatin organization
GO:0016577 P histone demethylation
GO:0032454 F histone H3-methyl-lysine-9 demethylase activity
GO:0033169 P histone H3-K9 demethylation
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0051213 F dioxygenase activity
GO:0051864 F histone H3-methyl-lysine-36 demethylase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0070544 P histone H3-K36 demethylation
8074 O_BomoIG13504_5prime_partial:A_BomoIG_DN29610_c0_g1_i2
378bp
 KDM4_isoform_X1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016491 F oxidoreductase activity
GO:0016568 P chromatin organization
GO:0016577 P histone demethylation
GO:0032454 F histone H3-methyl-lysine-9 demethylase activity
GO:0033169 P histone H3-K9 demethylation
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0051213 F dioxygenase activity
GO:0051864 F histone H3-methyl-lysine-36 demethylase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0070544 P histone H3-K36 demethylation
8075 O_BomoIG13505_complete:A_BomoIG_DN29686_c0_g1_i1
324bp
 BTB/POZ_and_MATH_domain-containing_protein_2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
8076 O_BomoIG13506_complete:A_BomoIG_DN29686_c0_g1_i2
362bp
 BTB/POZ_and_MATH_domain-containing_protein_2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
8077 O_BomoIG13507_complete:A_BomoIG_DN29686_c0_g1_i2
108bp
8078 O_BomoIG13508_complete:A_BomoIG_DN29686_c0_g1_i3
362bp
 BTB/POZ_and_MATH_domain-containing_protein_2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
8079 O_BomoIG13509_complete:A_BomoIG_DN29686_c0_g1_i3
108bp
8080 O_BomoIG1350_3prime_partial:A_BomoIG_DN30250_c3_g4_i1
110bp
8081 O_BomoIG13510_complete:A_BomoIG_DN29686_c0_g1_i4
362bp
 BTB/POZ_and_MATH_domain-containing_protein_2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
8082 O_BomoIG13511_complete:A_BomoIG_DN29686_c0_g1_i4
108bp
8083 O_BomoIG13512_complete:A_BomoIG_DN29686_c0_g1_i6
324bp
 BTB/POZ_and_MATH_domain-containing_protein_2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
8084 O_BomoIG13513_complete:A_BomoIG_DN29690_c0_g1_i1
667bp
 LETM1_and_EF-hand_domain-containing_protein_1,_mitochondrial_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0043022 F ribosome binding
8085 O_BomoIG13514_complete:A_BomoIG_DN29690_c0_g1_i1
288bp
8086 O_BomoIG13515_complete:A_BomoIG_DN29690_c0_g1_i2
760bp
 LETM1_and_EF-hand_domain-containing_protein_1,_mitochondrial_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0043022 F ribosome binding
8087 O_BomoIG13516_complete:A_BomoIG_DN29690_c0_g1_i2
288bp
8088 O_BomoIG13517_complete:A_BomoIG_DN29690_c0_g1_i2
115bp
8089 O_BomoIG13518_complete:A_BomoIG_DN29690_c0_g1_i3
704bp
 LETM1_and_EF-hand_domain-containing_protein_1,_mitochondrial_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0043022 F ribosome binding
8090 O_BomoIG13519_complete:A_BomoIG_DN29690_c0_g1_i3
288bp
8091 O_BomoIG1351_3prime_partial:A_BomoIG_DN30250_c3_g3_i2
272bp
 MICAL-like_protein_1_isoform_X1_[Bombyx_mori]
8092 O_BomoIG13520_complete:A_BomoIG_DN29690_c0_g1_i3
115bp
8093 O_BomoIG13521_complete:A_BomoIG_DN29690_c0_g1_i4
760bp
 LETM1_and_EF-hand_domain-containing_protein_1,_mitochondrial_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0043022 F ribosome binding
8094 O_BomoIG13522_complete:A_BomoIG_DN29690_c0_g1_i4
288bp
8095 O_BomoIG13523_complete:A_BomoIG_DN29690_c0_g1_i4
115bp
8096 O_BomoIG13524_complete:A_BomoIG_DN29690_c0_g1_i5
704bp
 LETM1_and_EF-hand_domain-containing_protein_1,_mitochondrial_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0043022 F ribosome binding
8097 O_BomoIG13525_complete:A_BomoIG_DN29690_c0_g1_i5
288bp
8098 O_BomoIG13526_complete:A_BomoIG_DN29690_c0_g1_i5
115bp
8099 O_BomoIG13527_3prime_partial:A_BomoIG_DN29641_c0_g1_i1
182bp
 reverse_transcriptase_[Bombyx_mori]
8100 O_BomoIG13528_5prime_partial:A_BomoIG_DN29641_c0_g1_i1
152bp
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