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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
8041 O_BomoIG13475_complete:A_BomoIG_DN29622_c0_g1_i7
100bp
8042 O_BomoIG13476_complete:A_BomoIG_DN29627_c0_g1_i1
230bp
 uncharacterized_protein_LOC101740269_[Bombyx_mori]
8043 O_BomoIG13477_complete:A_BomoIG_DN29627_c0_g1_i2
230bp
 uncharacterized_protein_LOC101740269_[Bombyx_mori]
8044 O_BomoIG13478_5prime_partial:A_BomoIG_DN29642_c0_g1_i1
478bp
hypothetical_protein_[Mycobacterium_sp._NAZ190054]
8045 O_BomoIG13479_complete:A_BomoIG_DN29642_c0_g1_i1
273bp
hypothetical_protein_PBI_MIAZEAL_148_[Mycobacterium_phage_MiaZeal]
8046 O_BomoIG1347_3prime_partial:A_BomoIG_DN30250_c3_g4_i1
253bp
8047 O_BomoIG13480_5prime_partial:A_BomoIG_DN29642_c0_g1_i1
138bp
hypothetical_protein_[Mycobacterium_gordonae]
8048 O_BomoIG13481_5prime_partial:A_BomoIG_DN29642_c0_g1_i1
126bp
8049 O_BomoIG13482_5prime_partial:A_BomoIG_DN29642_c0_g1_i1
120bp
8050 O_BomoIG13483_complete:A_BomoIG_DN29642_c0_g1_i1
106bp
8051 O_BomoIG13484_complete:A_BomoIG_DN29642_c0_g1_i1
102bp
hypothetical_protein_PBI_MIAZEAL_149_[Mycobacterium_phage_MiaZeal]
8052 O_BomoIG13485_internal:A_BomoIG_DN29642_c0_g2_i1
431bp
hypothetical_protein_[Mycobacterium_avium]
8053 O_BomoIG13486_3prime_partial:A_BomoIG_DN29642_c0_g2_i1
130bp
8054 O_BomoIG13487_5prime_partial:A_BomoIG_DN29642_c0_g2_i1
122bp
8055 O_BomoIG13488_5prime_partial:A_BomoIG_DN29642_c0_g1_i2
120bp
8056 O_BomoIG13489_5prime_partial:A_BomoIG_DN29642_c0_g1_i2
114bp
hypothetical_protein_PBI_MIAZEAL_149_[Mycobacterium_phage_MiaZeal]
8057 O_BomoIG1348_5prime_partial:A_BomoIG_DN30250_c3_g4_i1
146bp
8058 O_BomoIG13490_complete:A_BomoIG_DN29642_c0_g3_i1
216bp
hypothetical_protein_[Mycobacterium_abscessus]
8059 O_BomoIG13491_3prime_partial:A_BomoIG_DN29642_c0_g3_i1
165bp
hypothetical_protein_[Mycobacterium_gordonae]
8060 O_BomoIG13492_5prime_partial:A_BomoIG_DN29642_c0_g3_i1
110bp
8061 O_BomoIG13493_complete:A_BomoIG_DN29638_c1_g1_i1
204bp
 transcription_initiation_factor_TFIID_subunit_8_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005669 C transcription factor TFIID complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0009987 P cellular process
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
8062 O_BomoIG13494_internal:A_BomoIG_DN29638_c1_g2_i1
113bp
 menin_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000165 P MAPK cascade
GO:0000278 P mitotic cell cycle
GO:0000400 F four-way junction DNA binding
GO:0000403 F Y-form DNA binding
GO:0000785 C chromatin
GO:0001933 P negative regulation of protein phosphorylation
GO:0002076 P osteoblast development
GO:0003309 P type B pancreatic cell differentiation
GO:0003674 F molecular_function
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003690 F double-stranded DNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0007420 P brain development
GO:0008285 P negative regulation of cell population proliferation
GO:0009411 P response to UV
GO:0010332 P response to gamma radiation
GO:0010812 P negative regulation of cell-substrate adhesion
GO:0016363 C nuclear matrix
GO:0016568 P chromatin organization
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0030511 P positive regulation of transforming growth factor beta receptor signaling pathway
GO:0030674 F protein-macromolecule adaptor activity
GO:0032092 P positive regulation of protein binding
GO:0032154 C cleavage furrow
GO:0032925 P regulation of activin receptor signaling pathway
GO:0034968 P histone lysine methylation
GO:0035097 C histone methyltransferase complex
GO:0043234 C protein-containing complex
GO:0043433 P negative regulation of DNA-binding transcription factor activity
GO:0044212 F transcription cis-regulatory region binding
GO:0045668 P negative regulation of osteoblast differentiation
GO:0045736 P negative regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0045786 P negative regulation of cell cycle
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046329 P negative regulation of JNK cascade
GO:0046697 P decidualization
GO:0047485 F protein N-terminus binding
GO:0050680 P negative regulation of epithelial cell proliferation
GO:0051974 P negative regulation of telomerase activity
GO:0061469 P regulation of type B pancreatic cell proliferation
GO:0070412 F R-SMAD binding
GO:0071333 P cellular response to glucose stimulus
GO:0071375 P cellular response to peptide hormone stimulus
GO:0071559 P response to transforming growth factor beta
GO:1902807 P negative regulation of cell cycle G1/S phase transition
8063 O_BomoIG13495_complete:A_BomoIG_DN29638_c1_g2_i2
577bp
 menin_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000165 P MAPK cascade
GO:0000400 F four-way junction DNA binding
GO:0000403 F Y-form DNA binding
GO:0000784 C chromosome, telomeric region
GO:0000785 C chromatin
GO:0000790 C chromatin
GO:0001503 P ossification
GO:0001776 P leukocyte homeostasis
GO:0001933 P negative regulation of protein phosphorylation
GO:0002051 P osteoblast fate commitment
GO:0002076 P osteoblast development
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003690 F double-stranded DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0007050 P regulation of cell cycle
GO:0008285 P negative regulation of cell population proliferation
GO:0009411 P response to UV
GO:0010332 P response to gamma radiation
GO:0010468 P regulation of gene expression
GO:0010628 P positive regulation of gene expression
GO:0016363 C nuclear matrix
GO:0016568 P chromatin organization
GO:0016571 P histone methylation
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0030097 P hemopoiesis
GO:0030511 P positive regulation of transforming growth factor beta receptor signaling pathway
GO:0030674 F protein-macromolecule adaptor activity
GO:0031062 P positive regulation of histone methylation
GO:0032092 P positive regulation of protein binding
GO:0032154 C cleavage furrow
GO:0034968 P histone lysine methylation
GO:0035097 C histone methyltransferase complex
GO:0043065 P positive regulation of apoptotic process
GO:0043234 C protein-containing complex
GO:0043280 P positive regulation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0043433 P negative regulation of DNA-binding transcription factor activity
GO:0043565 F sequence-specific DNA binding
GO:0044212 F transcription cis-regulatory region binding
GO:0045597 P positive regulation of cell differentiation
GO:0045668 P negative regulation of osteoblast differentiation
GO:0045669 P positive regulation of osteoblast differentiation
GO:0045736 P negative regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0045786 P negative regulation of cell cycle
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046329 P negative regulation of JNK cascade
GO:0046621 P negative regulation of organ growth
GO:0047485 F protein N-terminus binding
GO:0048704 P embryonic skeletal system morphogenesis
GO:0051781 P positive regulation of cell division
GO:0051974 P negative regulation of telomerase activity
GO:0060021 P roof of mouth development
GO:0060135 P maternal process involved in female pregnancy
GO:0070412 F R-SMAD binding
8064 O_BomoIG13496_complete:A_BomoIG_DN29638_c1_g1_i2
280bp
 transcription_initiation_factor_TFIID_subunit_8_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005669 C transcription factor TFIID complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0009987 P cellular process
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
8065 O_BomoIG13497_complete:A_BomoIG_DN29633_c0_g1_i1
409bp
 ATP-dependent_RNA_helicase_SUV3_homolog,_mitochondrial_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0032508 P DNA duplex unwinding
8066 O_BomoIG13498_3prime_partial:A_BomoIG_DN29633_c0_g1_i2
340bp
 ATP-dependent_RNA_helicase_SUV3_homolog,_mitochondrial_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000963 P mitochondrial RNA processing
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006119 P oxidative phosphorylation
GO:0016787 F hydrolase activity
GO:0016817 F hydrolase activity, acting on acid anhydrides
GO:0022904 P respiratory electron transport chain
GO:0032508 P DNA duplex unwinding
GO:0044528 P regulation of mitochondrial mRNA stability
GO:0070131 P positive regulation of mitochondrial translation
GO:0090646 P mitochondrial tRNA processing
GO:0097222 P mitochondrial mRNA polyadenylation
8067 O_BomoIG13499_internal:A_BomoIG_DN29633_c0_g1_i3
109bp
 ATP-dependent_RNA_helicase_SUV3_homolog,_mitochondrial_[Bombyx_mori]
8068 O_BomoIG1349_complete:A_BomoIG_DN30250_c3_g4_i1
127bp
8069 O_BomoIG134_complete:A_BomoIG_DN30288_c4_g2_i9
138bp
8070 O_BomoIG13500_3prime_partial:A_BomoIG_DN29633_c0_g1_i5
776bp
 ATP-dependent_RNA_helicase_SUV3_homolog,_mitochondrial_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000963 P mitochondrial RNA processing
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006119 P oxidative phosphorylation
GO:0016787 F hydrolase activity
GO:0016817 F hydrolase activity, acting on acid anhydrides
GO:0022904 P respiratory electron transport chain
GO:0032508 P DNA duplex unwinding
GO:0044528 P regulation of mitochondrial mRNA stability
GO:0070131 P positive regulation of mitochondrial translation
GO:0090646 P mitochondrial tRNA processing
GO:0097222 P mitochondrial mRNA polyadenylation
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