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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
8011 O_BomoIG13448_internal:A_BomoIG_DN29616_c0_g1_i3
234bp
 vacuolar_protein_sorting-associated_protein_13D_[Bombyx_mori]
GO:0005622 C intracellular anatomical structure
GO:0006623 P protein targeting to vacuole
GO:0019898 C extrinsic component of membrane
GO:0045053 P protein retention in Golgi apparatus
GO:0070062 C extracellular exosome
8012 O_BomoIG13449_5prime_partial:A_BomoIG_DN29616_c0_g1_i3
105bp
8013 O_BomoIG1344_3prime_partial:A_BomoIG_DN30250_c3_g3_i1
528bp
 MICAL-like_protein_1_isoform_X1_[Bombyx_mori]
GO:0001725 C stress fiber
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0005923 C bicellular tight junction
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0017137 F small GTPase binding
GO:0030041 P actin filament polymerization
GO:0030054 C cell junction
GO:0031005 F filamin binding
GO:0031175 P neuron projection development
GO:0031532 P actin cytoskeleton reorganization
GO:0032432 C actin filament bundle
GO:0032456 P endocytic recycling
GO:0034446 P substrate adhesion-dependent cell spreading
GO:0042805 F actinin binding
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0046872 F metal ion binding
GO:0051015 F actin filament binding
GO:0055037 C recycling endosome
GO:0070830 P bicellular tight junction assembly
GO:1903955 P positive regulation of protein targeting to mitochondrion
8014 O_BomoIG13450_5prime_partial:A_BomoIG_DN29616_c0_g1_i4
735bp
 vacuolar_protein_sorting-associated_protein_13D_[Bombyx_mori]
GO:0005622 C intracellular anatomical structure
GO:0006623 P protein targeting to vacuole
GO:0019898 C extrinsic component of membrane
GO:0045053 P protein retention in Golgi apparatus
GO:0070062 C extracellular exosome
8015 O_BomoIG13451_5prime_partial:A_BomoIG_DN29616_c0_g1_i4
455bp
8016 O_BomoIG13452_complete:A_BomoIG_DN29616_c0_g1_i4
255bp
8017 O_BomoIG13453_complete:A_BomoIG_DN29616_c0_g1_i4
185bp
 vacuolar_protein_sorting-associated_protein_13D_[Bombyx_mori]
GO:0005622 C intracellular anatomical structure
GO:0006623 P protein targeting to vacuole
GO:0019898 C extrinsic component of membrane
GO:0045053 P protein retention in Golgi apparatus
GO:0070062 C extracellular exosome
8018 O_BomoIG13454_internal:A_BomoIG_DN29622_c0_g1_i2
134bp
8019 O_BomoIG13455_complete:A_BomoIG_DN29622_c0_g1_i3
261bp
 protein_transport_protein_Sec31A_[Bombyx_mori]
8020 O_BomoIG13456_complete:A_BomoIG_DN29622_c0_g1_i3
128bp
8021 O_BomoIG13457_complete:A_BomoIG_DN29622_c0_g1_i3
103bp
8022 O_BomoIG13458_complete:A_BomoIG_DN29622_c0_g1_i3
100bp
8023 O_BomoIG13459_complete:A_BomoIG_DN29622_c0_g1_i4
261bp
 protein_transport_protein_Sec31A_[Bombyx_mori]
8024 O_BomoIG1345_5prime_partial:A_BomoIG_DN30250_c3_g1_i3
304bp
 MICAL-like_protein_1_isoform_X1_[Bombyx_mori]
GO:0005768 C endosome
GO:0005770 C late endosome
GO:0006612 P protein targeting to membrane
GO:0006810 P transport
GO:0006897 P endocytosis
GO:0006898 P receptor-mediated endocytosis
GO:0008270 F zinc ion binding
GO:0010008 C endosome membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0017137 F small GTPase binding
GO:0019898 C extrinsic component of membrane
GO:0031175 P neuron projection development
GO:0031902 C late endosome membrane
GO:0032456 P endocytic recycling
GO:0032458 P slow endocytic recycling
GO:0036010 P protein localization to endosome
GO:0042802 F identical protein binding
GO:0046872 F metal ion binding
GO:0055038 C recycling endosome membrane
GO:0070300 F phosphatidic acid binding
GO:0097320 P plasma membrane tubulation
GO:1990090 P cellular response to nerve growth factor stimulus
GO:1990126 P endocytic recycling
8025 O_BomoIG13460_complete:A_BomoIG_DN29622_c0_g1_i4
128bp
8026 O_BomoIG13461_complete:A_BomoIG_DN29622_c0_g1_i4
103bp
8027 O_BomoIG13462_complete:A_BomoIG_DN29622_c0_g1_i4
100bp
8028 O_BomoIG13463_5prime_partial:A_BomoIG_DN29622_c0_g1_i5
211bp
8029 O_BomoIG13464_3prime_partial:A_BomoIG_DN29622_c0_g1_i5
174bp
 protein_transport_protein_Sec31A_[Bombyx_mori]
GO:0001889 P liver development
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006810 P transport
GO:0007029 P endoplasmic reticulum organization
GO:0012507 C ER to Golgi transport vesicle membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030134 C COPII-coated ER to Golgi transport vesicle
GO:0031410 C cytoplasmic vesicle
GO:0055123 P digestive system development
8030 O_BomoIG13465_5prime_partial:A_BomoIG_DN29622_c0_g1_i5
166bp
8031 O_BomoIG13466_3prime_partial:A_BomoIG_DN29622_c0_g1_i6
297bp
 protein_transport_protein_Sec31A_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0002474 P antigen processing and presentation of peptide antigen via MHC class I
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0012507 C ER to Golgi transport vesicle membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0019886 P antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0030120 C vesicle coat
GO:0030127 C COPII vesicle coat
GO:0030134 C COPII-coated ER to Golgi transport vesicle
GO:0031410 C cytoplasmic vesicle
GO:0036498 P IRE1-mediated unfolded protein response
GO:0043231 C intracellular membrane-bounded organelle
GO:0048208 P COPII vesicle coating
GO:0048306 F calcium-dependent protein binding
GO:0048471 C perinuclear region of cytoplasm
GO:0051592 P response to calcium ion
GO:0070971 C endoplasmic reticulum exit site
8032 O_BomoIG13467_5prime_partial:A_BomoIG_DN29622_c0_g1_i6
211bp
8033 O_BomoIG13468_5prime_partial:A_BomoIG_DN29622_c0_g1_i6
166bp
8034 O_BomoIG13469_complete:A_BomoIG_DN29622_c0_g1_i6
103bp
8035 O_BomoIG1346_5prime_partial:A_BomoIG_DN30250_c3_g4_i1
940bp
 uncharacterized_protein_LOC101744657_[Bombyx_mori]
8036 O_BomoIG13470_complete:A_BomoIG_DN29622_c0_g1_i6
100bp
8037 O_BomoIG13471_3prime_partial:A_BomoIG_DN29622_c0_g1_i7
297bp
 protein_transport_protein_Sec31A_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0002474 P antigen processing and presentation of peptide antigen via MHC class I
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0012507 C ER to Golgi transport vesicle membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0019886 P antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0030120 C vesicle coat
GO:0030127 C COPII vesicle coat
GO:0030134 C COPII-coated ER to Golgi transport vesicle
GO:0031410 C cytoplasmic vesicle
GO:0036498 P IRE1-mediated unfolded protein response
GO:0043231 C intracellular membrane-bounded organelle
GO:0048208 P COPII vesicle coating
GO:0048306 F calcium-dependent protein binding
GO:0048471 C perinuclear region of cytoplasm
GO:0051592 P response to calcium ion
GO:0070971 C endoplasmic reticulum exit site
8038 O_BomoIG13472_5prime_partial:A_BomoIG_DN29622_c0_g1_i7
211bp
8039 O_BomoIG13473_5prime_partial:A_BomoIG_DN29622_c0_g1_i7
166bp
8040 O_BomoIG13474_complete:A_BomoIG_DN29622_c0_g1_i7
103bp
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