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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
6361 O_BomoIG11963_complete:A_BomoIG_DN31309_c7_g1_i13
306bp
 26S_protease_regulatory_subunit_7_[Papilio_machaon]
GO:0000166 F nucleotide binding
GO:0000502 C proteasome complex
GO:0000932 C P-body
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0022624 C proteasome accessory complex
GO:0030163 P protein catabolic process
6362 O_BomoIG11964_complete:A_BomoIG_DN31309_c7_g1_i13
186bp
 hypothetical_protein_CAALFM_C105250WA_[Candida_albicans_SC5314]
6363 O_BomoIG11965_5prime_partial:A_BomoIG_DN31323_c2_g6_i1
103bp
6364 O_BomoIG11966_3prime_partial:A_BomoIG_DN31323_c3_g2_i1
111bp
 citron_Rho-interacting_kinase_[Bombyx_mori]
GO:0000070 P mitotic sister chromatid segregation
GO:0000166 F nucleotide binding
GO:0000910 P cytokinesis
GO:0001726 C ruffle
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005773 C vacuole
GO:0005829 C cytosol
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0007091 P metaphase/anaphase transition of mitotic cell cycle
GO:0007275 P multicellular organism development
GO:0007283 P spermatogenesis
GO:0007399 P nervous system development
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016358 P dendrite development
GO:0016740 F transferase activity
GO:0017124 F SH3 domain binding
GO:0030154 P cell differentiation
GO:0030165 F PDZ domain binding
GO:0032467 P positive regulation of cytokinesis
GO:0035556 P intracellular signal transduction
GO:0045665 P negative regulation of neuron differentiation
GO:0046872 F metal ion binding
GO:0048699 P generation of neurons
GO:0050774 P negative regulation of dendrite morphogenesis
GO:0051301 P cell division
GO:0097110 F scaffold protein binding
6365 O_BomoIG11967_3prime_partial:A_BomoIG_DN31323_c3_g2_i2
111bp
 citron_Rho-interacting_kinase_[Bombyx_mori]
GO:0000070 P mitotic sister chromatid segregation
GO:0000166 F nucleotide binding
GO:0000910 P cytokinesis
GO:0001726 C ruffle
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005773 C vacuole
GO:0005829 C cytosol
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0007091 P metaphase/anaphase transition of mitotic cell cycle
GO:0007275 P multicellular organism development
GO:0007283 P spermatogenesis
GO:0007399 P nervous system development
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016358 P dendrite development
GO:0016740 F transferase activity
GO:0017124 F SH3 domain binding
GO:0030154 P cell differentiation
GO:0030165 F PDZ domain binding
GO:0032467 P positive regulation of cytokinesis
GO:0035556 P intracellular signal transduction
GO:0045665 P negative regulation of neuron differentiation
GO:0046872 F metal ion binding
GO:0048699 P generation of neurons
GO:0050774 P negative regulation of dendrite morphogenesis
GO:0051301 P cell division
GO:0097110 F scaffold protein binding
6366 O_BomoIG11968_complete:A_BomoIG_DN31323_c3_g4_i1
229bp
 Golgi_reassembly-stacking_protein_2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005794 C Golgi apparatus
GO:0005797 C Golgi medial cisterna
GO:0006996 P organelle organization
GO:0007030 P Golgi organization
GO:0016020 C membrane
GO:0032580 C Golgi cisterna membrane
6367 O_BomoIG11969_5prime_partial:A_BomoIG_DN31323_c3_g5_i2
189bp
 citron_Rho-interacting_kinase_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000910 P cytokinesis
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0017124 F SH3 domain binding
GO:0030154 P cell differentiation
GO:0030165 F PDZ domain binding
GO:0032467 P positive regulation of cytokinesis
GO:0035556 P intracellular signal transduction
GO:0046872 F metal ion binding
GO:0048699 P generation of neurons
GO:0051301 P cell division
GO:0097110 F scaffold protein binding
6368 O_BomoIG1196_complete:A_BomoIG_DN30281_c7_g1_i1
543bp
 CCR4-NOT_transcription_complex_subunit_6_isoform_X2_[Bombyx_mori]
GO:0000289 P nuclear-transcribed mRNA poly(A) tail shortening
GO:0003723 F RNA binding
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0004532 F exoribonuclease activity
GO:0004535 F poly(A)-specific ribonuclease activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006417 P regulation of translation
GO:0006977 P DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest
GO:0008284 P positive regulation of cell population proliferation
GO:0010606 P positive regulation of cytoplasmic mRNA processing body assembly
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0030014 C CCR4-NOT complex
GO:0031047 P gene silencing by RNA
GO:0035195 P gene silencing by miRNA
GO:0043928 P exonucleolytic catabolism of deadenylated mRNA
GO:0046872 F metal ion binding
GO:0070966 P nuclear-transcribed mRNA catabolic process, no-go decay
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090503 P RNA phosphodiester bond hydrolysis, exonucleolytic
GO:2000327 P obsolete positive regulation of nuclear receptor transcription coactivator activity
6369 O_BomoIG11970_5prime_partial:A_BomoIG_DN31323_c3_g5_i3
335bp
 citron_Rho-interacting_kinase_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000910 P cytokinesis
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0017124 F SH3 domain binding
GO:0030154 P cell differentiation
GO:0030165 F PDZ domain binding
GO:0032467 P positive regulation of cytokinesis
GO:0035556 P intracellular signal transduction
GO:0046872 F metal ion binding
GO:0048699 P generation of neurons
GO:0051301 P cell division
GO:0097110 F scaffold protein binding
6370 O_BomoIG11971_complete:A_BomoIG_DN31323_c3_g5_i3
113bp
6371 O_BomoIG11972_complete:A_BomoIG_DN31323_c3_g5_i4
116bp
6372 O_BomoIG11973_complete:A_BomoIG_DN31323_c3_g4_i2
455bp
 Golgi_reassembly-stacking_protein_2_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005515 F protein binding
GO:0005794 C Golgi apparatus
GO:0006996 P organelle organization
GO:0016020 C membrane
6373 O_BomoIG11974_5prime_partial:A_BomoIG_DN31323_c3_g5_i5
267bp
 citron_Rho-interacting_kinase_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000910 P cytokinesis
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0017124 F SH3 domain binding
GO:0030154 P cell differentiation
GO:0030165 F PDZ domain binding
GO:0032467 P positive regulation of cytokinesis
GO:0035556 P intracellular signal transduction
GO:0046872 F metal ion binding
GO:0048699 P generation of neurons
GO:0051301 P cell division
GO:0097110 F scaffold protein binding
6374 O_BomoIG11975_5prime_partial:A_BomoIG_DN31323_c3_g5_i6
370bp
 citron_Rho-interacting_kinase_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000910 P cytokinesis
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0017124 F SH3 domain binding
GO:0030154 P cell differentiation
GO:0030165 F PDZ domain binding
GO:0032467 P positive regulation of cytokinesis
GO:0035556 P intracellular signal transduction
GO:0046872 F metal ion binding
GO:0048699 P generation of neurons
GO:0051301 P cell division
GO:0097110 F scaffold protein binding
6375 O_BomoIG11976_5prime_partial:A_BomoIG_DN31323_c3_g5_i7
267bp
 citron_Rho-interacting_kinase_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000910 P cytokinesis
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0017124 F SH3 domain binding
GO:0030154 P cell differentiation
GO:0030165 F PDZ domain binding
GO:0032467 P positive regulation of cytokinesis
GO:0035556 P intracellular signal transduction
GO:0046872 F metal ion binding
GO:0048699 P generation of neurons
GO:0051301 P cell division
GO:0097110 F scaffold protein binding
6376 O_BomoIG11977_complete:A_BomoIG_DN31323_c3_g5_i7
109bp
6377 O_BomoIG11978_complete:A_BomoIG_DN31369_c1_g1_i1
102bp
6378 O_BomoIG11979_complete:A_BomoIG_DN31369_c1_g1_i2
102bp
6379 O_BomoIG1197_complete:A_BomoIG_DN30281_c7_g1_i2
204bp
 CCR4-NOT_transcription_complex_subunit_6_isoform_X1_[Bombyx_mori]
GO:0000289 P nuclear-transcribed mRNA poly(A) tail shortening
GO:0003723 F RNA binding
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0004532 F exoribonuclease activity
GO:0004535 F poly(A)-specific ribonuclease activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006417 P regulation of translation
GO:0006977 P DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest
GO:0008284 P positive regulation of cell population proliferation
GO:0010606 P positive regulation of cytoplasmic mRNA processing body assembly
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0030014 C CCR4-NOT complex
GO:0031047 P gene silencing by RNA
GO:0035195 P gene silencing by miRNA
GO:0043928 P exonucleolytic catabolism of deadenylated mRNA
GO:0046872 F metal ion binding
GO:0070966 P nuclear-transcribed mRNA catabolic process, no-go decay
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090503 P RNA phosphodiester bond hydrolysis, exonucleolytic
GO:2000327 P obsolete positive regulation of nuclear receptor transcription coactivator activity
6380 O_BomoIG11980_complete:A_BomoIG_DN31369_c1_g1_i7
102bp
6381 O_BomoIG11981_complete:A_BomoIG_DN31320_c1_g1_i1
1510bp
 LOW_QUALITY_PROTEIN:_adhesion_G_protein-coupled_receptor_A3_[Bombyx_mori]
GO:0001525 P angiogenesis
GO:0001944 P vasculature development
GO:0002040 P sprouting angiogenesis
GO:0004871 F obsolete signal transducer activity
GO:0004888 F transmembrane signaling receptor activity
GO:0004930 F G protein-coupled receptor activity
GO:0005886 C plasma membrane
GO:0007165 P signal transduction
GO:0007166 P cell surface receptor signaling pathway
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007399 P nervous system development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016055 P Wnt signaling pathway
GO:1990791 P dorsal root ganglion development
6382 O_BomoIG11982_complete:A_BomoIG_DN31320_c1_g1_i1
200bp
6383 O_BomoIG11983_complete:A_BomoIG_DN31320_c1_g1_i1
179bp
6384 O_BomoIG11984_complete:A_BomoIG_DN31320_c1_g1_i1
101bp
6385 O_BomoIG11985_complete:A_BomoIG_DN31320_c1_g1_i2
1623bp
 LOW_QUALITY_PROTEIN:_adhesion_G_protein-coupled_receptor_A3_[Bombyx_mori]
GO:0001525 P angiogenesis
GO:0001944 P vasculature development
GO:0002040 P sprouting angiogenesis
GO:0004871 F obsolete signal transducer activity
GO:0004888 F transmembrane signaling receptor activity
GO:0004930 F G protein-coupled receptor activity
GO:0005886 C plasma membrane
GO:0007165 P signal transduction
GO:0007166 P cell surface receptor signaling pathway
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007399 P nervous system development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016055 P Wnt signaling pathway
GO:1990791 P dorsal root ganglion development
6386 O_BomoIG11986_complete:A_BomoIG_DN31320_c1_g1_i2
200bp
6387 O_BomoIG11987_complete:A_BomoIG_DN31320_c1_g1_i2
179bp
6388 O_BomoIG11988_complete:A_BomoIG_DN31320_c1_g1_i2
101bp
6389 O_BomoIG11989_complete:A_BomoIG_DN31320_c1_g1_i3
1050bp
 LOW_QUALITY_PROTEIN:_adhesion_G_protein-coupled_receptor_A3_[Bombyx_mori]
GO:0001525 P angiogenesis
GO:0002040 P sprouting angiogenesis
GO:0004871 F obsolete signal transducer activity
GO:0004888 F transmembrane signaling receptor activity
GO:0004930 F G protein-coupled receptor activity
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0007165 P signal transduction
GO:0007166 P cell surface receptor signaling pathway
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007417 P central nervous system development
GO:0009986 C cell surface
GO:0010595 P positive regulation of endothelial cell migration
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030175 C filopodium
GO:0042995 C cell projection
GO:0043542 P endothelial cell migration
GO:0045765 P regulation of angiogenesis
GO:0050920 P regulation of chemotaxis
GO:0090210 P regulation of establishment of blood-brain barrier
GO:1900747 P negative regulation of vascular endothelial growth factor signaling pathway
6390 O_BomoIG1198_complete:A_BomoIG_DN30281_c7_g1_i3
543bp
 CCR4-NOT_transcription_complex_subunit_6_isoform_X2_[Bombyx_mori]
GO:0000289 P nuclear-transcribed mRNA poly(A) tail shortening
GO:0003723 F RNA binding
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0004532 F exoribonuclease activity
GO:0004535 F poly(A)-specific ribonuclease activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006417 P regulation of translation
GO:0006977 P DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest
GO:0008284 P positive regulation of cell population proliferation
GO:0010606 P positive regulation of cytoplasmic mRNA processing body assembly
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0030014 C CCR4-NOT complex
GO:0031047 P gene silencing by RNA
GO:0035195 P gene silencing by miRNA
GO:0043928 P exonucleolytic catabolism of deadenylated mRNA
GO:0046872 F metal ion binding
GO:0070966 P nuclear-transcribed mRNA catabolic process, no-go decay
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090503 P RNA phosphodiester bond hydrolysis, exonucleolytic
GO:2000327 P obsolete positive regulation of nuclear receptor transcription coactivator activity
previous next from show/104180

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