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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
6331 O_BomoIG11936_complete:A_BomoIG_DN31324_c3_g2_i6
398bp
 probable_serine/threonine-protein_kinase_DDB_G0280133_isoform_X1_[Bombyx_mori]
6332 O_BomoIG11937_5prime_partial:A_BomoIG_DN31324_c3_g2_i6
249bp
6333 O_BomoIG11938_3prime_partial:A_BomoIG_DN31324_c3_g2_i8
138bp
 smad_nuclear-interacting_protein_1_isoform_X3_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006355 P regulation of transcription, DNA-templated
GO:0007249 P I-kappaB kinase/NF-kappaB signaling
GO:0031047 P gene silencing by RNA
GO:0035196 P production of miRNAs involved in gene silencing by miRNA
GO:0044822 F RNA binding
GO:1903955 P positive regulation of protein targeting to mitochondrion
6334 O_BomoIG11939_5prime_partial:A_BomoIG_DN31324_c3_g2_i9
221bp
 probable_serine/threonine-protein_kinase_DDB_G0280133_isoform_X2_[Bombyx_mori]
GO:0001501 P skeletal system development
GO:0005201 F extracellular matrix structural constituent
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005540 F hyaluronic acid binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0007155 P cell adhesion
GO:0007417 P central nervous system development
GO:0030246 F carbohydrate binding
GO:0046872 F metal ion binding
6335 O_BomoIG1193_complete:A_BomoIG_DN30217_c8_g1_i16
245bp
 popeye_domain-containing_2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005886 C plasma membrane
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042383 C sarcolemma
6336 O_BomoIG11940_5prime_partial:A_BomoIG_DN31324_c3_g1_i5
269bp
 uncharacterized_protein_LOC110372995_[Helicoverpa_armigera]
6337 O_BomoIG11941_complete:A_BomoIG_DN31324_c3_g2_i10
405bp
 probable_serine/threonine-protein_kinase_DDB_G0280133_isoform_X2_[Bombyx_mori]
6338 O_BomoIG11942_complete:A_BomoIG_DN31324_c3_g5_i4
199bp
 uncharacterized_protein_LOC105842184_[Bombyx_mori]
6339 O_BomoIG11943_complete:A_BomoIG_DN31324_c3_g1_i6
347bp
 PREDICTED:_uncharacterized_protein_LOC106711325_[Papilio_machaon]
6340 O_BomoIG11944_complete:A_BomoIG_DN31324_c3_g1_i6
145bp
 hypothetical_protein_2_[Beihai_toti-like_virus_2]
6341 O_BomoIG11945_complete:A_BomoIG_DN31324_c3_g1_i6
115bp
6342 O_BomoIG11946_5prime_partial:A_BomoIG_DN31324_c3_g1_i6
101bp
6343 O_BomoIG11947_complete:A_BomoIG_DN31324_c3_g2_i11
159bp
 probable_serine/threonine-protein_kinase_DDB_G0280133_isoform_X2_[Bombyx_mori]
GO:0001501 P skeletal system development
GO:0005201 F extracellular matrix structural constituent
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005540 F hyaluronic acid binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0007155 P cell adhesion
GO:0007417 P central nervous system development
GO:0030246 F carbohydrate binding
GO:0046872 F metal ion binding
6344 O_BomoIG11948_complete:A_BomoIG_DN31324_c3_g2_i12
406bp
 probable_serine/threonine-protein_kinase_DDB_G0280133_isoform_X1_[Bombyx_mori]
6345 O_BomoIG11949_5prime_partial:A_BomoIG_DN31324_c3_g2_i12
249bp
6346 O_BomoIG1194_complete:A_BomoIG_DN30281_c6_g5_i2
205bp
 ribosomal_protein_L15_[Bombyx_mori]
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
6347 O_BomoIG11950_complete:A_BomoIG_DN31324_c3_g5_i5
261bp
 uncharacterized_protein_LOC105842184_[Bombyx_mori]
6348 O_BomoIG11951_complete:A_BomoIG_DN31324_c3_g2_i13
398bp
 probable_serine/threonine-protein_kinase_DDB_G0280133_isoform_X1_[Bombyx_mori]
6349 O_BomoIG11952_5prime_partial:A_BomoIG_DN31324_c3_g2_i13
249bp
6350 O_BomoIG11953_complete:A_BomoIG_DN31324_c3_g2_i14
406bp
 probable_serine/threonine-protein_kinase_DDB_G0280133_isoform_X1_[Bombyx_mori]
6351 O_BomoIG11954_5prime_partial:A_BomoIG_DN31324_c3_g2_i14
249bp
6352 O_BomoIG11955_complete:A_BomoIG_DN31324_c3_g2_i15
397bp
 probable_serine/threonine-protein_kinase_DDB_G0280133_isoform_X2_[Bombyx_mori]
6353 O_BomoIG11956_5prime_partial:A_BomoIG_DN31309_c2_g1_i1
126bp
6354 O_BomoIG11957_complete:A_BomoIG_DN31309_c7_g1_i2
379bp
 26S_protease_regulatory_subunit_7_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000502 C proteasome complex
GO:0000932 C P-body
GO:0001649 P osteoblast differentiation
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008540 C proteasome regulatory particle, base subcomplex
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0017025 F TBP-class protein binding
GO:0022624 C proteasome accessory complex
GO:0030163 P protein catabolic process
GO:0030433 P ubiquitin-dependent ERAD pathway
GO:0031595 C nuclear proteasome complex
GO:0031597 C cytosolic proteasome complex
GO:0036402 F proteasome-activating activity
GO:0043231 C intracellular membrane-bounded organelle
GO:0045899 P positive regulation of RNA polymerase II transcription preinitiation complex assembly
GO:1901800 P positive regulation of proteasomal protein catabolic process
6355 O_BomoIG11958_complete:A_BomoIG_DN31309_c7_g1_i2
186bp
 hypothetical_protein_CAALFM_C105250WA_[Candida_albicans_SC5314]
6356 O_BomoIG11959_complete:A_BomoIG_DN31309_c7_g1_i2
135bp
 hypothetical_protein_CLUG_03378_[Clavispora_lusitaniae_ATCC_42720]
6357 O_BomoIG1195_5prime_partial:A_BomoIG_DN30281_c6_g5_i3
249bp
 ribosomal_protein_L15_[Bombyx_mori]
GO:0002181 P cytoplasmic translation
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0022625 C cytosolic large ribosomal subunit
GO:0030529 C ribonucleoprotein complex
6358 O_BomoIG11960_complete:A_BomoIG_DN31309_c7_g1_i11
435bp
 26S_protease_regulatory_subunit_7_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000502 C proteasome complex
GO:0000932 C P-body
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0022624 C proteasome accessory complex
GO:0030163 P protein catabolic process
6359 O_BomoIG11961_complete:A_BomoIG_DN31309_c7_g1_i11
186bp
 hypothetical_protein_CAALFM_C105250WA_[Candida_albicans_SC5314]
6360 O_BomoIG11962_complete:A_BomoIG_DN31309_c7_g1_i11
135bp
 hypothetical_protein_CLUG_03378_[Clavispora_lusitaniae_ATCC_42720]
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