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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
5461 O_BomoIG11152_complete:A_BomoIG_DN31313_c6_g3_i8
311bp
5462 O_BomoIG11153_complete:A_BomoIG_DN31313_c6_g3_i9
513bp
 DNA_ligase_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003909 F DNA ligase activity
GO:0003910 F DNA ligase (ATP) activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
GO:0051103 P DNA ligation involved in DNA repair
GO:0051301 P cell division
GO:0071897 P DNA biosynthetic process
5463 O_BomoIG11154_complete:A_BomoIG_DN31313_c6_g3_i9
311bp
5464 O_BomoIG11155_complete:A_BomoIG_DN31313_c6_g3_i10
343bp
 DNA_ligase_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003909 F DNA ligase activity
GO:0003910 F DNA ligase (ATP) activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
GO:0051103 P DNA ligation involved in DNA repair
GO:0051301 P cell division
GO:0071897 P DNA biosynthetic process
5465 O_BomoIG11156_5prime_partial:A_BomoIG_DN31313_c6_g5_i1
113bp
5466 O_BomoIG11157_complete:A_BomoIG_DN31313_c6_g3_i13
886bp
 DNA_ligase_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003909 F DNA ligase activity
GO:0003910 F DNA ligase (ATP) activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
GO:0051103 P DNA ligation involved in DNA repair
GO:0051301 P cell division
GO:0071897 P DNA biosynthetic process
5467 O_BomoIG11158_complete:A_BomoIG_DN31313_c6_g3_i13
311bp
5468 O_BomoIG11159_complete:A_BomoIG_DN31313_c6_g3_i14
843bp
 DNA_ligase_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003909 F DNA ligase activity
GO:0003910 F DNA ligase (ATP) activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
GO:0051103 P DNA ligation involved in DNA repair
GO:0051301 P cell division
GO:0071897 P DNA biosynthetic process
5469 O_BomoIG1115_5prime_partial:A_BomoIG_DN30255_c2_g1_i8
105bp
5470 O_BomoIG11160_complete:A_BomoIG_DN31313_c6_g3_i14
311bp
5471 O_BomoIG11161_internal:A_BomoIG_DN31313_c6_g3_i15
580bp
 DNA_ligase_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003909 F DNA ligase activity
GO:0003910 F DNA ligase (ATP) activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
GO:0051103 P DNA ligation involved in DNA repair
GO:0051301 P cell division
GO:0071897 P DNA biosynthetic process
5472 O_BomoIG11162_complete:A_BomoIG_DN31313_c6_g3_i15
311bp
5473 O_BomoIG11163_complete:A_BomoIG_DN31313_c6_g3_i16
386bp
 DNA_ligase_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003909 F DNA ligase activity
GO:0003910 F DNA ligase (ATP) activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
GO:0051103 P DNA ligation involved in DNA repair
GO:0051301 P cell division
GO:0071897 P DNA biosynthetic process
5474 O_BomoIG11164_complete:A_BomoIG_DN31313_c6_g3_i17
110bp
 DNA_ligase_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003909 F DNA ligase activity
GO:0003910 F DNA ligase (ATP) activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006260 P DNA replication
GO:0006266 P DNA ligation
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0016874 F ligase activity
GO:0043596 C nuclear replication fork
GO:0051103 P DNA ligation involved in DNA repair
GO:0051301 P cell division
GO:0071897 P DNA biosynthetic process
GO:1903461 P Okazaki fragment processing involved in mitotic DNA replication
5475 O_BomoIG11165_complete:A_BomoIG_DN31386_c3_g3_i1
104bp
5476 O_BomoIG11166_5prime_partial:A_BomoIG_DN31386_c3_g6_i1
108bp
5477 O_BomoIG11167_3prime_partial:A_BomoIG_DN31386_c3_g5_i2
464bp
 PREDICTED:_uncharacterized_protein_LOC106718363_[Papilio_machaon]
5478 O_BomoIG11168_complete:A_BomoIG_DN31386_c3_g5_i2
384bp
 1-acyl-sn-glycerol-3-phosphate_acyltransferase_gamma_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0003841 F 1-acylglycerol-3-phosphate O-acyltransferase activity
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005886 C plasma membrane
GO:0006629 P lipid metabolic process
GO:0006654 P phosphatidic acid biosynthetic process
GO:0008152 P metabolic process
GO:0008654 P phospholipid biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016024 P CDP-diacylglycerol biosynthetic process
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0019432 P triglyceride biosynthetic process
GO:0042171 F lysophosphatidic acid acyltransferase activity
5479 O_BomoIG11169_3prime_partial:A_BomoIG_DN31386_c3_g5_i3
464bp
 PREDICTED:_uncharacterized_protein_LOC106718363_[Papilio_machaon]
5480 O_BomoIG1116_complete:A_BomoIG_DN30255_c2_g1_i9
539bp
 kinesin-like_protein_Klp68D_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003774 F cytoskeletal motor activity
GO:0003777 F microtubule motor activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0007018 P microtubule-based movement
GO:0008017 F microtubule binding
GO:0008152 P metabolic process
5481 O_BomoIG11170_complete:A_BomoIG_DN31386_c3_g5_i3
416bp
 1-acyl-sn-glycerol-3-phosphate_acyltransferase_gamma_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0003841 F 1-acylglycerol-3-phosphate O-acyltransferase activity
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005886 C plasma membrane
GO:0006629 P lipid metabolic process
GO:0006654 P phosphatidic acid biosynthetic process
GO:0008152 P metabolic process
GO:0008654 P phospholipid biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016024 P CDP-diacylglycerol biosynthetic process
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0019432 P triglyceride biosynthetic process
GO:0042171 F lysophosphatidic acid acyltransferase activity
5482 O_BomoIG11171_complete:A_BomoIG_DN31386_c3_g5_i4
384bp
 1-acyl-sn-glycerol-3-phosphate_acyltransferase_gamma_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0003841 F 1-acylglycerol-3-phosphate O-acyltransferase activity
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005886 C plasma membrane
GO:0006629 P lipid metabolic process
GO:0006654 P phosphatidic acid biosynthetic process
GO:0008152 P metabolic process
GO:0008654 P phospholipid biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016024 P CDP-diacylglycerol biosynthetic process
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0019432 P triglyceride biosynthetic process
GO:0042171 F lysophosphatidic acid acyltransferase activity
5483 O_BomoIG11172_3prime_partial:A_BomoIG_DN31386_c3_g5_i6
231bp
 uncharacterized_protein_LOC110384942_[Bombyx_mori]
5484 O_BomoIG11173_complete:A_BomoIG_DN31386_c3_g3_i2
104bp
5485 O_BomoIG11174_3prime_partial:A_BomoIG_DN31386_c3_g5_i7
231bp
 uncharacterized_protein_LOC110384942_[Bombyx_mori]
5486 O_BomoIG11175_complete:A_BomoIG_DN31386_c3_g5_i9
129bp
 1-acyl-sn-glycerol-3-phosphate_acyltransferase_gamma_[Bombyx_mori]
5487 O_BomoIG11176_5prime_partial:A_BomoIG_DN31311_c0_g2_i1
277bp
 protein_disulfide-isomerase_TMX3_[Bombyx_mori]
GO:0003756 F protein disulfide isomerase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006457 P protein folding
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016853 F isomerase activity
GO:0045454 P cell redox homeostasis
5488 O_BomoIG11177_complete:A_BomoIG_DN31311_c0_g6_i1
454bp
 serine--tRNA_synthetase-like_protein_Slimp_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004828 F serine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006434 P seryl-tRNA aminoacylation
GO:0007005 P mitochondrion organization
GO:0009507 C chloroplast
GO:0009536 C plastid
GO:0009658 P chloroplast organization
GO:0016874 F ligase activity
GO:0048481 P plant ovule development
GO:0097056 P selenocysteinyl-tRNA(Sec) biosynthetic process
5489 O_BomoIG11178_complete:A_BomoIG_DN31311_c0_g6_i1
274bp
 transport_and_Golgi_organization_protein_2_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0007030 P Golgi organization
GO:0009306 P protein secretion
5490 O_BomoIG11179_complete:A_BomoIG_DN31311_c0_g6_i1
150bp
 zinc_finger_protein_593_homolog_isoform_X2_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
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