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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
5431 O_BomoIG11125_complete:A_BomoIG_DN31349_c1_g6_i5
106bp
5432 O_BomoIG11126_complete:A_BomoIG_DN31349_c1_g5_i7
185bp
 TLD_domain-containing_protein_1_[Bombyx_mori]
5433 O_BomoIG11127_3prime_partial:A_BomoIG_DN31349_c1_g5_i8
457bp
 TLD_domain-containing_protein_1_[Bombyx_mori]
5434 O_BomoIG11128_complete:A_BomoIG_DN31349_c1_g5_i9
452bp
 TLD_domain-containing_protein_1_[Bombyx_mori]
5435 O_BomoIG11129_complete:A_BomoIG_DN31349_c1_g6_i6
1896bp
 uncharacterized_protein_LOC101737406_[Bombyx_mori]
5436 O_BomoIG1112_complete:A_BomoIG_DN30255_c2_g1_i8
159bp
5437 O_BomoIG11130_complete:A_BomoIG_DN31349_c1_g6_i6
166bp
5438 O_BomoIG11131_complete:A_BomoIG_DN31349_c1_g6_i6
106bp
5439 O_BomoIG11132_complete:A_BomoIG_DN31349_c1_g1_i7
746bp
 PREDICTED:_nephrin-like_[Amyelois_transitella]
GO:0000165 P MAPK cascade
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007254 P JNK cascade
GO:0007275 P multicellular organism development
GO:0007517 P muscle organ development
GO:0007519 P skeletal muscle tissue development
GO:0007520 P myoblast fusion
GO:0007588 P excretion
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0017022 F myosin binding
GO:0030838 P positive regulation of actin filament polymerization
GO:0032836 P glomerular basement membrane development
GO:0035418 P protein localization to synapse
GO:0036057 C slit diaphragm
GO:0042995 C cell projection
GO:0044062 P regulation of excretion
GO:0070062 C extracellular exosome
GO:0072015 P glomerular visceral epithelial cell development
5440 O_BomoIG11133_5prime_partial:A_BomoIG_DN31305_c2_g2_i1
103bp
5441 O_BomoIG11134_complete:A_BomoIG_DN31305_c2_g3_i4
139bp
 bombyxin_A-1_homolog_[Bombyx_mori]
GO:0005179 F hormone activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0008083 F growth factor activity
5442 O_BomoIG11135_complete:A_BomoIG_DN31305_c2_g3_i6
123bp
 bombyxin_A-1_homolog_[Bombyx_mori]
GO:0005179 F hormone activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0008083 F growth factor activity
5443 O_BomoIG11136_complete:A_BomoIG_DN31305_c2_g3_i8
139bp
 bombyxin_A-1_homolog_[Bombyx_mori]
GO:0005179 F hormone activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0008083 F growth factor activity
5444 O_BomoIG11137_complete:A_BomoIG_DN31305_c2_g3_i9
123bp
 bombyxin_A-1_homolog_[Bombyx_mori]
GO:0005179 F hormone activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0008083 F growth factor activity
5445 O_BomoIG11138_internal:A_BomoIG_DN31313_c6_g3_i1
586bp
 DNA_ligase_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003909 F DNA ligase activity
GO:0003910 F DNA ligase (ATP) activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
GO:0051103 P DNA ligation involved in DNA repair
GO:0051301 P cell division
GO:0071897 P DNA biosynthetic process
5446 O_BomoIG11139_complete:A_BomoIG_DN31313_c6_g3_i1
311bp
5447 O_BomoIG1113_complete:A_BomoIG_DN30255_c2_g1_i8
139bp
 hypothetical_protein_AX774_g1302_[Zancudomyces_culisetae]
5448 O_BomoIG11140_complete:A_BomoIG_DN31313_c6_g3_i3
395bp
 DNA_ligase_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003909 F DNA ligase activity
GO:0003910 F DNA ligase (ATP) activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006260 P DNA replication
GO:0006266 P DNA ligation
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0016874 F ligase activity
GO:0043596 C nuclear replication fork
GO:0051103 P DNA ligation involved in DNA repair
GO:0051301 P cell division
GO:0071897 P DNA biosynthetic process
GO:1903461 P Okazaki fragment processing involved in mitotic DNA replication
5449 O_BomoIG11141_complete:A_BomoIG_DN31313_c6_g3_i3
289bp
5450 O_BomoIG11142_complete:A_BomoIG_DN31313_c6_g3_i4
798bp
 DNA_ligase_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003909 F DNA ligase activity
GO:0003910 F DNA ligase (ATP) activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
GO:0051103 P DNA ligation involved in DNA repair
GO:0051301 P cell division
GO:0071897 P DNA biosynthetic process
5451 O_BomoIG11143_complete:A_BomoIG_DN31313_c6_g3_i4
311bp
5452 O_BomoIG11144_internal:A_BomoIG_DN31313_c6_g3_i5
581bp
 DNA_ligase_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003909 F DNA ligase activity
GO:0003910 F DNA ligase (ATP) activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
GO:0051103 P DNA ligation involved in DNA repair
GO:0051301 P cell division
GO:0071897 P DNA biosynthetic process
5453 O_BomoIG11145_complete:A_BomoIG_DN31313_c6_g3_i5
311bp
5454 O_BomoIG11146_complete:A_BomoIG_DN31313_c6_g3_i6
841bp
 DNA_ligase_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003909 F DNA ligase activity
GO:0003910 F DNA ligase (ATP) activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
GO:0051103 P DNA ligation involved in DNA repair
GO:0051301 P cell division
GO:0071897 P DNA biosynthetic process
5455 O_BomoIG11147_complete:A_BomoIG_DN31313_c6_g3_i6
311bp
5456 O_BomoIG11148_complete:A_BomoIG_DN31313_c6_g3_i7
330bp
 DNA_ligase_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003909 F DNA ligase activity
GO:0003910 F DNA ligase (ATP) activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006260 P DNA replication
GO:0006266 P DNA ligation
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0016874 F ligase activity
GO:0043596 C nuclear replication fork
GO:0051103 P DNA ligation involved in DNA repair
GO:0051301 P cell division
GO:0071897 P DNA biosynthetic process
GO:1903461 P Okazaki fragment processing involved in mitotic DNA replication
5457 O_BomoIG11149_complete:A_BomoIG_DN31313_c6_g3_i7
136bp
5458 O_BomoIG1114_5prime_partial:A_BomoIG_DN30255_c2_g1_i8
136bp
5459 O_BomoIG11150_complete:A_BomoIG_DN31313_c6_g3_i7
129bp
5460 O_BomoIG11151_complete:A_BomoIG_DN31313_c6_g3_i8
571bp
 DNA_ligase_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003909 F DNA ligase activity
GO:0003910 F DNA ligase (ATP) activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
GO:0051103 P DNA ligation involved in DNA repair
GO:0051301 P cell division
GO:0071897 P DNA biosynthetic process
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