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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
5491 O_BomoIG1117_complete:A_BomoIG_DN30255_c2_g1_i9
177bp
 hypothetical_protein_X777_06784,_partial_[Ooceraea_biroi]
5492 O_BomoIG11180_complete:A_BomoIG_DN31311_c0_g6_i2
454bp
 serine--tRNA_synthetase-like_protein_Slimp_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004828 F serine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006434 P seryl-tRNA aminoacylation
GO:0007005 P mitochondrion organization
GO:0009507 C chloroplast
GO:0009536 C plastid
GO:0009658 P chloroplast organization
GO:0016874 F ligase activity
GO:0048481 P plant ovule development
GO:0097056 P selenocysteinyl-tRNA(Sec) biosynthetic process
5493 O_BomoIG11181_complete:A_BomoIG_DN31311_c0_g6_i2
150bp
 zinc_finger_protein_593_homolog_isoform_X2_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
5494 O_BomoIG11182_complete:A_BomoIG_DN31311_c0_g6_i2
116bp
 transport_and_Golgi_organization_protein_2_isoform_X2_[Bombyx_mori]
5495 O_BomoIG11183_3prime_partial:A_BomoIG_DN31311_c0_g8_i1
156bp
 protein_disulfide-isomerase_TMX3_[Bombyx_mori]
GO:0003756 F protein disulfide isomerase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006457 P protein folding
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016853 F isomerase activity
GO:0045454 P cell redox homeostasis
5496 O_BomoIG11184_complete:A_BomoIG_DN31311_c0_g6_i3
454bp
 serine--tRNA_synthetase-like_protein_Slimp_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004828 F serine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006434 P seryl-tRNA aminoacylation
GO:0007005 P mitochondrion organization
GO:0009507 C chloroplast
GO:0009536 C plastid
GO:0009658 P chloroplast organization
GO:0016874 F ligase activity
GO:0048481 P plant ovule development
GO:0097056 P selenocysteinyl-tRNA(Sec) biosynthetic process
5497 O_BomoIG11185_5prime_partial:A_BomoIG_DN31311_c0_g6_i3
281bp
 transport_and_Golgi_organization_protein_2_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0007030 P Golgi organization
GO:0009306 P protein secretion
5498 O_BomoIG11186_5prime_partial:A_BomoIG_DN31311_c0_g6_i3
174bp
 zinc_finger_protein_593_homolog_isoform_X2_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
5499 O_BomoIG11187_5prime_partial:A_BomoIG_DN31311_c0_g10_i1
100bp
 Elongation_factor_1-alpha_[Operophtera_brumata]
5500 O_BomoIG11188_5prime_partial:A_BomoIG_DN31311_c0_g7_i3
110bp
 lola_[Danaus_plexippus_plexippus]
GO:0001964 P startle response
GO:0002121 P inter-male aggressive behavior
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007409 P axonogenesis
GO:0007411 P axon guidance
GO:0007464 P R3/R4 cell fate commitment
GO:0007526 P larval somatic muscle development
GO:0008406 P gonad development
GO:0010906 P regulation of glucose metabolic process
GO:0016199 P axon midline choice point recognition
GO:0019730 P antimicrobial humoral response
GO:0022008 P neurogenesis
GO:0030154 P cell differentiation
GO:0031987 P locomotion involved in locomotory behavior
GO:0035167 P larval lymph gland hemopoiesis
GO:0044719 P regulation of imaginal disc-derived wing size
GO:0045467 P R7 cell development
GO:0045476 P nurse cell apoptotic process
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0048813 P dendrite morphogenesis
GO:0048854 P brain morphogenesis
5501 O_BomoIG11189_5prime_partial:A_BomoIG_DN31311_c0_g7_i4
110bp
 lola_[Danaus_plexippus_plexippus]
GO:0001964 P startle response
GO:0002121 P inter-male aggressive behavior
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007409 P axonogenesis
GO:0007411 P axon guidance
GO:0007464 P R3/R4 cell fate commitment
GO:0007526 P larval somatic muscle development
GO:0008406 P gonad development
GO:0010906 P regulation of glucose metabolic process
GO:0016199 P axon midline choice point recognition
GO:0019730 P antimicrobial humoral response
GO:0022008 P neurogenesis
GO:0030154 P cell differentiation
GO:0031987 P locomotion involved in locomotory behavior
GO:0035167 P larval lymph gland hemopoiesis
GO:0044719 P regulation of imaginal disc-derived wing size
GO:0045467 P R7 cell development
GO:0045476 P nurse cell apoptotic process
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0048813 P dendrite morphogenesis
GO:0048854 P brain morphogenesis
5502 O_BomoIG1118_complete:A_BomoIG_DN30255_c2_g1_i9
159bp
5503 O_BomoIG11190_complete:A_BomoIG_DN31311_c0_g6_i5
454bp
 serine--tRNA_synthetase-like_protein_Slimp_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004828 F serine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006434 P seryl-tRNA aminoacylation
GO:0007005 P mitochondrion organization
GO:0009507 C chloroplast
GO:0009536 C plastid
GO:0009658 P chloroplast organization
GO:0016874 F ligase activity
GO:0048481 P plant ovule development
GO:0097056 P selenocysteinyl-tRNA(Sec) biosynthetic process
5504 O_BomoIG11191_5prime_partial:A_BomoIG_DN31311_c0_g6_i5
174bp
 zinc_finger_protein_593_homolog_isoform_X2_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
5505 O_BomoIG11192_complete:A_BomoIG_DN31311_c0_g6_i5
116bp
 transport_and_Golgi_organization_protein_2_isoform_X2_[Bombyx_mori]
5506 O_BomoIG11193_complete:A_BomoIG_DN31311_c0_g14_i1
693bp
 probable_ATP-dependent_RNA_helicase_DDX20_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000387 P spliceosomal snRNP assembly
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0010501 P RNA secondary structure unwinding
GO:0016787 F hydrolase activity
GO:0032797 C SMN complex
GO:0034719 C SMN-Sm protein complex
5507 O_BomoIG11194_complete:A_BomoIG_DN31311_c0_g10_i2
106bp
 Elongation_factor_1-alpha_[Operophtera_brumata]
5508 O_BomoIG11195_complete:A_BomoIG_DN31311_c0_g6_i8
127bp
 transport_and_Golgi_organization_protein_2_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0007030 P Golgi organization
GO:0009306 P protein secretion
5509 O_BomoIG11196_complete:A_BomoIG_DN31311_c0_g6_i9
454bp
 serine--tRNA_synthetase-like_protein_Slimp_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004828 F serine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006434 P seryl-tRNA aminoacylation
GO:0007005 P mitochondrion organization
GO:0009507 C chloroplast
GO:0009536 C plastid
GO:0009658 P chloroplast organization
GO:0016874 F ligase activity
GO:0048481 P plant ovule development
GO:0097056 P selenocysteinyl-tRNA(Sec) biosynthetic process
5510 O_BomoIG11197_complete:A_BomoIG_DN31311_c0_g6_i9
167bp
 transport_and_Golgi_organization_protein_2_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0007030 P Golgi organization
GO:0009306 P protein secretion
5511 O_BomoIG11198_complete:A_BomoIG_DN31311_c0_g6_i9
150bp
 zinc_finger_protein_593_homolog_isoform_X2_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
5512 O_BomoIG11199_complete:A_BomoIG_DN31311_c0_g6_i10
454bp
 serine--tRNA_synthetase-like_protein_Slimp_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004828 F serine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006434 P seryl-tRNA aminoacylation
GO:0007005 P mitochondrion organization
GO:0009507 C chloroplast
GO:0009536 C plastid
GO:0009658 P chloroplast organization
GO:0016874 F ligase activity
GO:0048481 P plant ovule development
GO:0097056 P selenocysteinyl-tRNA(Sec) biosynthetic process
5513 O_BomoIG1119_complete:A_BomoIG_DN30255_c2_g1_i9
139bp
 hypothetical_protein_AX774_g1302_[Zancudomyces_culisetae]
5514 O_BomoIG111_complete:A_BomoIG_DN30288_c4_g4_i1
144bp
5515 O_BomoIG11200_complete:A_BomoIG_DN31311_c0_g6_i10
167bp
 transport_and_Golgi_organization_protein_2_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0007030 P Golgi organization
GO:0009306 P protein secretion
5516 O_BomoIG11201_complete:A_BomoIG_DN31311_c0_g6_i11
454bp
 serine--tRNA_synthetase-like_protein_Slimp_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004828 F serine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006434 P seryl-tRNA aminoacylation
GO:0007005 P mitochondrion organization
GO:0009507 C chloroplast
GO:0009536 C plastid
GO:0009658 P chloroplast organization
GO:0016874 F ligase activity
GO:0048481 P plant ovule development
GO:0097056 P selenocysteinyl-tRNA(Sec) biosynthetic process
5517 O_BomoIG11202_complete:A_BomoIG_DN31311_c0_g6_i11
150bp
 zinc_finger_protein_593_homolog_isoform_X2_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
5518 O_BomoIG11203_complete:A_BomoIG_DN31311_c0_g6_i11
116bp
 transport_and_Golgi_organization_protein_2_isoform_X2_[Bombyx_mori]
5519 O_BomoIG11204_complete:A_BomoIG_DN31355_c2_g1_i2
912bp
 ubiquitin_carboxyl-terminal_hydrolase_8_[Bombyx_mori]
GO:0000281 P mitotic cytokinesis
GO:0001669 C acrosomal vesicle
GO:0004843 F thiol-dependent deubiquitinase
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0007032 P endosome organization
GO:0007049 P cell cycle
GO:0007265 P Ras protein signal transduction
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0010008 C endosome membrane
GO:0016020 C membrane
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0017124 F SH3 domain binding
GO:0019897 C extrinsic component of plasma membrane
GO:0030496 C midbody
GO:0031313 C extrinsic component of endosome membrane
GO:0036459 F thiol-dependent deubiquitinase
GO:0070536 P protein K63-linked deubiquitination
GO:0071108 P protein K48-linked deubiquitination
5520 O_BomoIG11205_complete:A_BomoIG_DN31355_c2_g1_i2
128bp
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