Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
3991	O_BomoIG103593_complete:A_BomoIG_DN29808_c0_g1_i16 115bp	Bomo_Chr10
3992	O_BomoIG103594_complete:A_BomoIG_DN29808_c0_g1_i17 132bp	Bomo_Chr10	mediator_of_RNA_polymerase_II_transcription_subunit_13_[Bombyx_mori]	GO:0001104 F transcription coregulator activity GO:0004252 F serine-type endopeptidase activity GO:0005515 F protein binding GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006357 P regulation of transcription by RNA polymerase II GO:0006366 P transcription by RNA polymerase II GO:0006367 P transcription initiation from RNA polymerase II promoter GO:0006508 P proteolysis GO:0007275 P multicellular organism development GO:0007526 P larval somatic muscle development GO:0016592 C mediator complex GO:0022416 P chaeta development GO:0030177 P positive regulation of Wnt signaling pathway GO:0036011 P imaginal disc-derived leg segmentation GO:0045165 P cell fate commitment GO:0045498 P sex comb development GO:0048190 P wing disc dorsal/ventral pattern formation GO:0048749 P compound eye development GO:0070847 C core mediator complex
3993	O_BomoIG103595_internal:A_BomoIG_DN29808_c0_g1_i18 195bp	Bomo_Chr10
3994	O_BomoIG103596_internal:A_BomoIG_DN29808_c0_g1_i18 194bp	Bomo_Chr10
3995	O_BomoIG103597_5prime_partial:A_BomoIG_DN29808_c0_g1_i18 189bp	Bomo_Chr10	mediator_of_RNA_polymerase_II_transcription_subunit_13_[Bombyx_mori]
3996	O_BomoIG103598_5prime_partial:A_BomoIG_DN29808_c0_g1_i18 141bp	Bomo_Chr10
3997	O_BomoIG103599_5prime_partial:A_BomoIG_DN29808_c0_g1_i18 129bp	Bomo_Chr10
3998	O_BomoIG10359_complete:A_BomoIG_DN33725_c0_g3_i3 213bp	Bomo_Chr15	thioredoxin_[Bombyx_mori]	GO:0000103 P sulfate assimilation GO:0000502 C proteasome complex GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0005739 C mitochondrion GO:0006457 P protein folding GO:0015035 F protein-disulfide reductase activity GO:0015036 F disulfide oxidoreductase activity GO:0016671 F oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor GO:0034599 P cellular response to oxidative stress GO:0045454 P cell redox homeostasis GO:0055114 P obsolete oxidation-reduction process GO:0070062 C extracellular exosome
3999	O_BomoIG1035_complete:A_BomoIG_DN30287_c0_g1_i5 310bp	Bomo_Chr15	minichromosome_maintenance_complex_component_7_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0003677 F DNA binding GO:0003678 F DNA helicase activity GO:0003682 F chromatin binding GO:0004386 F helicase activity GO:0005524 F ATP binding GO:0005634 C nucleus GO:0005656 C nuclear pre-replicative complex GO:0005875 C microtubule associated complex GO:0006260 P DNA replication GO:0006267 P pre-replicative complex assembly involved in nuclear cell cycle DNA replication GO:0006270 P DNA replication initiation GO:0007049 P cell cycle GO:0007095 P mitotic G2 DNA damage checkpoint signaling GO:0016787 F hydrolase activity GO:0032508 P DNA duplex unwinding GO:0042555 C MCM complex GO:0043138 F 3'-5' DNA helicase activity
4000	O_BomoIG103600_5prime_partial:A_BomoIG_DN29808_c0_g1_i19 110bp	Bomo_Chr10
4001	O_BomoIG103601_complete:A_BomoIG_DN29808_c0_g1_i20 132bp	Bomo_Chr10	mediator_of_RNA_polymerase_II_transcription_subunit_13_[Bombyx_mori]	GO:0001104 F transcription coregulator activity GO:0004252 F serine-type endopeptidase activity GO:0005515 F protein binding GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006357 P regulation of transcription by RNA polymerase II GO:0006366 P transcription by RNA polymerase II GO:0006367 P transcription initiation from RNA polymerase II promoter GO:0006508 P proteolysis GO:0007275 P multicellular organism development GO:0007526 P larval somatic muscle development GO:0016592 C mediator complex GO:0022416 P chaeta development GO:0030177 P positive regulation of Wnt signaling pathway GO:0036011 P imaginal disc-derived leg segmentation GO:0045165 P cell fate commitment GO:0045498 P sex comb development GO:0048190 P wing disc dorsal/ventral pattern formation GO:0048749 P compound eye development GO:0070847 C core mediator complex
4002	O_BomoIG103602_3prime_partial:A_BomoIG_DN29808_c0_g1_i21 502bp	Bomo_Chr10	mediator_of_RNA_polymerase_II_transcription_subunit_13_[Bombyx_mori]	GO:0001104 F transcription coregulator activity GO:0004252 F serine-type endopeptidase activity GO:0005515 F protein binding GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006357 P regulation of transcription by RNA polymerase II GO:0006366 P transcription by RNA polymerase II GO:0006367 P transcription initiation from RNA polymerase II promoter GO:0006508 P proteolysis GO:0007275 P multicellular organism development GO:0007526 P larval somatic muscle development GO:0016592 C mediator complex GO:0022416 P chaeta development GO:0030177 P positive regulation of Wnt signaling pathway GO:0036011 P imaginal disc-derived leg segmentation GO:0045165 P cell fate commitment GO:0045498 P sex comb development GO:0048190 P wing disc dorsal/ventral pattern formation GO:0048749 P compound eye development GO:0070847 C core mediator complex
4003	O_BomoIG103603_complete:A_BomoIG_DN29808_c0_g1_i21 182bp	Bomo_Chr10
4004	O_BomoIG103604_complete:A_BomoIG_DN29808_c0_g1_i21 115bp	Bomo_Chr10
4005	O_BomoIG103605_internal:A_BomoIG_DN29808_c0_g1_i22 163bp	Bomo_Chr10
4006	O_BomoIG103606_internal:A_BomoIG_DN29808_c0_g1_i22 162bp	Bomo_Chr10
4007	O_BomoIG103607_5prime_partial:A_BomoIG_DN29808_c0_g1_i22 157bp	Bomo_Chr10	mediator_of_RNA_polymerase_II_transcription_subunit_13_[Bombyx_mori]
4008	O_BomoIG103608_5prime_partial:A_BomoIG_DN29808_c0_g1_i22 109bp	Bomo_Chr10
4009	O_BomoIG103609_5prime_partial:A_BomoIG_DN29808_c0_g1_i23 268bp	Bomo_Chr10
4010	O_BomoIG10360_internal:A_BomoIG_DN33725_c0_g9_i2 130bp	Bomo_Chr11	reticulon-4-interacting_protein_1,_mitochondrial_[Bombyx_mori]	GO:0005739 C mitochondrion GO:0008270 F zinc ion binding GO:0016491 F oxidoreductase activity GO:0055114 P obsolete oxidation-reduction process
4011	O_BomoIG103610_complete:A_BomoIG_DN29808_c0_g1_i23 163bp	Bomo_Chr10	mediator_of_RNA_polymerase_II_transcription_subunit_13_[Bombyx_mori]
4012	O_BomoIG103611_5prime_partial:A_BomoIG_DN29808_c0_g1_i23 136bp	Bomo_Chr10
4013	O_BomoIG103612_5prime_partial:A_BomoIG_DN29808_c0_g1_i23 124bp	Bomo_Chr10
4014	O_BomoIG103613_complete:A_BomoIG_DN29808_c0_g1_i23 117bp	Bomo_Chr10
4015	O_BomoIG103614_internal:A_BomoIG_DN29808_c0_g1_i24 190bp	Bomo_Chr10
4016	O_BomoIG103615_internal:A_BomoIG_DN29808_c0_g1_i24 189bp	Bomo_Chr10
4017	O_BomoIG103616_5prime_partial:A_BomoIG_DN29808_c0_g1_i24 184bp	Bomo_Chr10	mediator_of_RNA_polymerase_II_transcription_subunit_13_[Bombyx_mori]
4018	O_BomoIG103617_5prime_partial:A_BomoIG_DN29808_c0_g1_i24 136bp	Bomo_Chr10
4019	O_BomoIG103618_5prime_partial:A_BomoIG_DN29808_c0_g1_i24 124bp	Bomo_Chr10
4020	O_BomoIG103619_3prime_partial:A_BomoIG_DN29808_c0_g1_i25 475bp	Bomo_Chr10	mediator_of_RNA_polymerase_II_transcription_subunit_13_[Bombyx_mori]	GO:0001104 F transcription coregulator activity GO:0004252 F serine-type endopeptidase activity GO:0005515 F protein binding GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006357 P regulation of transcription by RNA polymerase II GO:0006366 P transcription by RNA polymerase II GO:0006367 P transcription initiation from RNA polymerase II promoter GO:0006508 P proteolysis GO:0007275 P multicellular organism development GO:0007526 P larval somatic muscle development GO:0016592 C mediator complex GO:0022416 P chaeta development GO:0030177 P positive regulation of Wnt signaling pathway GO:0036011 P imaginal disc-derived leg segmentation GO:0045165 P cell fate commitment GO:0045498 P sex comb development GO:0048190 P wing disc dorsal/ventral pattern formation GO:0048749 P compound eye development GO:0070847 C core mediator complex