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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3961 O_BomoIG103566_complete:A_BomoIG_DN29808_c0_g1_i9
115bp
3962 O_BomoIG103567_complete:A_BomoIG_DN29808_c0_g1_i10
212bp
 mediator_of_RNA_polymerase_2_transcription_subunit_13_like_protein_[Danaus_plexippus_plexippus]
GO:0001104 F transcription coregulator activity
GO:0004252 F serine-type endopeptidase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006508 P proteolysis
GO:0007275 P multicellular organism development
GO:0007526 P larval somatic muscle development
GO:0016592 C mediator complex
GO:0022416 P chaeta development
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0036011 P imaginal disc-derived leg segmentation
GO:0045165 P cell fate commitment
GO:0045498 P sex comb development
GO:0048190 P wing disc dorsal/ventral pattern formation
GO:0048749 P compound eye development
GO:0070847 C core mediator complex
3963 O_BomoIG103568_complete:A_BomoIG_DN29808_c0_g1_i11
451bp
 mediator_of_RNA_polymerase_II_transcription_subunit_13_[Bombyx_mori]
GO:0001104 F transcription coregulator activity
GO:0004252 F serine-type endopeptidase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006508 P proteolysis
GO:0007275 P multicellular organism development
GO:0007526 P larval somatic muscle development
GO:0016592 C mediator complex
GO:0022416 P chaeta development
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0036011 P imaginal disc-derived leg segmentation
GO:0045165 P cell fate commitment
GO:0045498 P sex comb development
GO:0048190 P wing disc dorsal/ventral pattern formation
GO:0048749 P compound eye development
GO:0070847 C core mediator complex
3964 O_BomoIG103569_5prime_partial:A_BomoIG_DN29808_c0_g1_i11
268bp
3965 O_BomoIG10356_internal:A_BomoIG_DN33725_c0_g9_i1
135bp
 reticulon-4-interacting_protein_1,_mitochondrial_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0008270 F zinc ion binding
GO:0016491 F oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
3966 O_BomoIG103570_5prime_partial:A_BomoIG_DN29808_c0_g1_i11
136bp
3967 O_BomoIG103571_5prime_partial:A_BomoIG_DN29808_c0_g1_i11
124bp
3968 O_BomoIG103572_complete:A_BomoIG_DN29808_c0_g1_i11
115bp
3969 O_BomoIG103573_5prime_partial:A_BomoIG_DN29808_c0_g1_i12
180bp
3970 O_BomoIG103574_5prime_partial:A_BomoIG_DN29808_c0_g1_i12
173bp
3971 O_BomoIG103575_5prime_partial:A_BomoIG_DN29808_c0_g1_i12
139bp
3972 O_BomoIG103576_3prime_partial:A_BomoIG_DN29808_c0_g1_i13
502bp
 mediator_of_RNA_polymerase_II_transcription_subunit_13_[Bombyx_mori]
GO:0001104 F transcription coregulator activity
GO:0004252 F serine-type endopeptidase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006508 P proteolysis
GO:0007275 P multicellular organism development
GO:0007526 P larval somatic muscle development
GO:0016592 C mediator complex
GO:0022416 P chaeta development
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0036011 P imaginal disc-derived leg segmentation
GO:0045165 P cell fate commitment
GO:0045498 P sex comb development
GO:0048190 P wing disc dorsal/ventral pattern formation
GO:0048749 P compound eye development
GO:0070847 C core mediator complex
3973 O_BomoIG103577_complete:A_BomoIG_DN29808_c0_g1_i13
182bp
3974 O_BomoIG103578_complete:A_BomoIG_DN29808_c0_g1_i13
115bp
3975 O_BomoIG103579_complete:A_BomoIG_DN29808_c0_g1_i14
370bp
 mediator_of_RNA_polymerase_II_transcription_subunit_13_[Bombyx_mori]
GO:0001104 F transcription coregulator activity
GO:0003712 F transcription coregulator activity
GO:0003713 F transcription coactivator activity
GO:0004872 F signaling receptor activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0016020 C membrane
GO:0016592 C mediator complex
GO:0030374 F nuclear receptor coactivator activity
GO:0030518 P intracellular steroid hormone receptor signaling pathway
GO:0030521 P androgen receptor signaling pathway
GO:0042632 P cholesterol homeostasis
GO:0042809 F vitamin D receptor binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046966 F thyroid hormone receptor binding
GO:0070328 P triglyceride homeostasis
GO:1904168 P negative regulation of DNA-binding transcription factor activity
3976 O_BomoIG10357_complete:A_BomoIG_DN33725_c0_g3_i2
288bp
 thioredoxin_[Bombyx_mori]
GO:0000103 P sulfate assimilation
GO:0000502 C proteasome complex
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006457 P protein folding
GO:0015035 F protein-disulfide reductase activity
GO:0015036 F disulfide oxidoreductase activity
GO:0016671 F oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
GO:0034599 P cellular response to oxidative stress
GO:0045454 P cell redox homeostasis
GO:0055114 P obsolete oxidation-reduction process
GO:0070062 C extracellular exosome
3977 O_BomoIG103580_5prime_partial:A_BomoIG_DN29808_c0_g1_i14
273bp
3978 O_BomoIG103581_5prime_partial:A_BomoIG_DN29808_c0_g1_i14
141bp
3979 O_BomoIG103582_5prime_partial:A_BomoIG_DN29808_c0_g1_i14
129bp
3980 O_BomoIG103583_complete:A_BomoIG_DN29808_c0_g1_i14
115bp
3981 O_BomoIG103584_complete:A_BomoIG_DN29808_c0_g1_i15
456bp
 mediator_of_RNA_polymerase_II_transcription_subunit_13_[Bombyx_mori]
GO:0001104 F transcription coregulator activity
GO:0004252 F serine-type endopeptidase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006508 P proteolysis
GO:0007275 P multicellular organism development
GO:0007526 P larval somatic muscle development
GO:0016592 C mediator complex
GO:0022416 P chaeta development
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0036011 P imaginal disc-derived leg segmentation
GO:0045165 P cell fate commitment
GO:0045498 P sex comb development
GO:0048190 P wing disc dorsal/ventral pattern formation
GO:0048749 P compound eye development
GO:0070847 C core mediator complex
3982 O_BomoIG103585_5prime_partial:A_BomoIG_DN29808_c0_g1_i15
273bp
3983 O_BomoIG103586_5prime_partial:A_BomoIG_DN29808_c0_g1_i15
141bp
3984 O_BomoIG103587_5prime_partial:A_BomoIG_DN29808_c0_g1_i15
129bp
3985 O_BomoIG103588_complete:A_BomoIG_DN29808_c0_g1_i15
115bp
3986 O_BomoIG103589_complete:A_BomoIG_DN29808_c0_g1_i16
456bp
 mediator_of_RNA_polymerase_II_transcription_subunit_13_[Bombyx_mori]
GO:0001104 F transcription coregulator activity
GO:0004252 F serine-type endopeptidase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006508 P proteolysis
GO:0007275 P multicellular organism development
GO:0007526 P larval somatic muscle development
GO:0016592 C mediator complex
GO:0022416 P chaeta development
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0036011 P imaginal disc-derived leg segmentation
GO:0045165 P cell fate commitment
GO:0045498 P sex comb development
GO:0048190 P wing disc dorsal/ventral pattern formation
GO:0048749 P compound eye development
GO:0070847 C core mediator complex
3987 O_BomoIG10358_3prime_partial:A_BomoIG_DN33725_c0_g8_i2
519bp
 probable_28S_rRNA_(cytosine-C(5))-methyltransferase_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0008150 P biological_process
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0044822 F RNA binding
3988 O_BomoIG103590_5prime_partial:A_BomoIG_DN29808_c0_g1_i16
273bp
3989 O_BomoIG103591_5prime_partial:A_BomoIG_DN29808_c0_g1_i16
141bp
3990 O_BomoIG103592_5prime_partial:A_BomoIG_DN29808_c0_g1_i16
129bp
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