SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

previous next from show/104180
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
4021 O_BomoIG10361_complete:A_BomoIG_DN33725_c0_g3_i4
219bp
 thioredoxin_[Bombyx_mori]
GO:0000103 P sulfate assimilation
GO:0000502 C proteasome complex
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006457 P protein folding
GO:0006662 P glycerol ether metabolic process
GO:0015035 F protein-disulfide reductase activity
GO:0016671 F oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
GO:0034599 P cellular response to oxidative stress
GO:0045454 P cell redox homeostasis
GO:0055114 P obsolete oxidation-reduction process
4022 O_BomoIG103620_complete:A_BomoIG_DN29808_c0_g1_i25
115bp
4023 O_BomoIG103621_5prime_partial:A_BomoIG_DN29862_c6_g1_i3
111bp
4024 O_BomoIG103622_5prime_partial:A_BomoIG_DN29862_c7_g1_i1
171bp
4025 O_BomoIG103623_3prime_partial:A_BomoIG_DN29862_c7_g1_i1
166bp
 uncharacterized_protein_LOC101742436_isoform_X3_[Bombyx_mori]
4026 O_BomoIG103624_complete:A_BomoIG_DN29862_c7_g3_i2
1246bp
 copper-transporting_ATPase_1_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001568 P blood vessel development
GO:0001701 P in utero embryonic development
GO:0001974 P blood vessel remodeling
GO:0002082 P regulation of oxidative phosphorylation
GO:0004008 F P-type divalent copper transporter activity
GO:0005375 F copper ion transmembrane transporter activity
GO:0005507 F copper ion binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005770 C late endosome
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006568 P tryptophan metabolic process
GO:0006584 P catecholamine metabolic process
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006812 P cation transport
GO:0006825 P copper ion transport
GO:0006878 P cellular copper ion homeostasis
GO:0007005 P mitochondrion organization
GO:0007595 P lactation
GO:0007626 P locomotory behavior
GO:0010041 P response to iron(III) ion
GO:0010043 P response to zinc ion
GO:0010273 P detoxification of copper ion
GO:0015677 P copper ion import
GO:0015679 P plasma membrane copper ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016323 C basolateral plasma membrane
GO:0016532 F superoxide dismutase copper chaperone activity
GO:0016787 F hydrolase activity
GO:0018205 P peptidyl-lysine modification
GO:0019430 P removal of superoxide radicals
GO:0019829 F ATPase-coupled cation transmembrane transporter activity
GO:0021702 P cerebellar Purkinje cell differentiation
GO:0021860 P pyramidal neuron development
GO:0021954 P central nervous system neuron development
GO:0030001 P metal ion transport
GO:0030140 C trans-Golgi network transport vesicle
GO:0030141 C secretory granule
GO:0030198 P extracellular matrix organization
GO:0030199 P collagen fibril organization
GO:0031069 P hair follicle morphogenesis
GO:0031526 C brush border membrane
GO:0032767 F copper-dependent protein binding
GO:0034220 P ion transmembrane transport
GO:0042093 P T-helper cell differentiation
GO:0042414 P epinephrine metabolic process
GO:0042415 P norepinephrine metabolic process
GO:0042417 P dopamine metabolic process
GO:0042428 P serotonin metabolic process
GO:0043005 C neuron projection
GO:0043025 C neuronal cell body
GO:0043085 P positive regulation of catalytic activity
GO:0043473 P pigmentation
GO:0043588 P skin development
GO:0046688 P response to copper ion
GO:0046872 F metal ion binding
GO:0048251 P elastic fiber assembly
GO:0048286 P lung alveolus development
GO:0048471 C perinuclear region of cytoplasm
GO:0048553 P negative regulation of catalytic activity
GO:0048554 P positive regulation of catalytic activity
GO:0048812 P neuron projection morphogenesis
GO:0051216 P cartilage development
GO:0051353 P positive regulation of oxidoreductase activity
GO:0051542 P elastin biosynthetic process
GO:0060003 P copper ion export
4027 O_BomoIG103625_complete:A_BomoIG_DN29862_c7_g3_i2
161bp
 Uncharacterised_protein_[Mycobacterium_abscessus_subsp._abscessus]
4028 O_BomoIG103626_complete:A_BomoIG_DN29862_c7_g3_i2
140bp
4029 O_BomoIG103627_complete:A_BomoIG_DN29862_c7_g3_i2
138bp
4030 O_BomoIG103628_complete:A_BomoIG_DN29862_c7_g3_i2
120bp
4031 O_BomoIG103629_complete:A_BomoIG_DN29862_c7_g3_i2
110bp
4032 O_BomoIG10362_complete:A_BomoIG_DN33725_c0_g8_i3
135bp
 probable_28S_rRNA_(cytosine-C(5))-methyltransferase_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0008168 F methyltransferase activity
GO:0016428 F tRNA (cytosine-5-)-methyltransferase activity
GO:0016740 F transferase activity
GO:0030488 P tRNA methylation
GO:0032259 P methylation
4033 O_BomoIG103630_complete:A_BomoIG_DN29862_c7_g3_i2
106bp
4034 O_BomoIG103631_complete:A_BomoIG_DN29862_c7_g3_i2
105bp
 Uncharacterised_protein_[Streptococcus_pneumoniae]
4035 O_BomoIG103632_complete:A_BomoIG_DN29862_c7_g3_i3
1254bp
 copper-transporting_ATPase_1_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001568 P blood vessel development
GO:0001701 P in utero embryonic development
GO:0001974 P blood vessel remodeling
GO:0002082 P regulation of oxidative phosphorylation
GO:0004008 F P-type divalent copper transporter activity
GO:0005375 F copper ion transmembrane transporter activity
GO:0005507 F copper ion binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005770 C late endosome
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006568 P tryptophan metabolic process
GO:0006584 P catecholamine metabolic process
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006812 P cation transport
GO:0006825 P copper ion transport
GO:0006878 P cellular copper ion homeostasis
GO:0007005 P mitochondrion organization
GO:0007595 P lactation
GO:0007626 P locomotory behavior
GO:0010041 P response to iron(III) ion
GO:0010043 P response to zinc ion
GO:0010273 P detoxification of copper ion
GO:0015677 P copper ion import
GO:0015679 P plasma membrane copper ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016323 C basolateral plasma membrane
GO:0016532 F superoxide dismutase copper chaperone activity
GO:0016787 F hydrolase activity
GO:0018205 P peptidyl-lysine modification
GO:0019430 P removal of superoxide radicals
GO:0019829 F ATPase-coupled cation transmembrane transporter activity
GO:0021702 P cerebellar Purkinje cell differentiation
GO:0021860 P pyramidal neuron development
GO:0021954 P central nervous system neuron development
GO:0030001 P metal ion transport
GO:0030140 C trans-Golgi network transport vesicle
GO:0030141 C secretory granule
GO:0030198 P extracellular matrix organization
GO:0030199 P collagen fibril organization
GO:0031069 P hair follicle morphogenesis
GO:0031526 C brush border membrane
GO:0032767 F copper-dependent protein binding
GO:0034220 P ion transmembrane transport
GO:0042093 P T-helper cell differentiation
GO:0042414 P epinephrine metabolic process
GO:0042415 P norepinephrine metabolic process
GO:0042417 P dopamine metabolic process
GO:0042428 P serotonin metabolic process
GO:0043005 C neuron projection
GO:0043025 C neuronal cell body
GO:0043085 P positive regulation of catalytic activity
GO:0043473 P pigmentation
GO:0043588 P skin development
GO:0046688 P response to copper ion
GO:0046872 F metal ion binding
GO:0048251 P elastic fiber assembly
GO:0048286 P lung alveolus development
GO:0048471 C perinuclear region of cytoplasm
GO:0048553 P negative regulation of catalytic activity
GO:0048554 P positive regulation of catalytic activity
GO:0048812 P neuron projection morphogenesis
GO:0051216 P cartilage development
GO:0051353 P positive regulation of oxidoreductase activity
GO:0051542 P elastin biosynthetic process
GO:0060003 P copper ion export
4036 O_BomoIG103633_complete:A_BomoIG_DN29862_c7_g3_i3
161bp
 Uncharacterised_protein_[Mycobacterium_abscessus_subsp._abscessus]
4037 O_BomoIG103634_complete:A_BomoIG_DN29862_c7_g3_i3
140bp
4038 O_BomoIG103635_complete:A_BomoIG_DN29862_c7_g3_i3
138bp
4039 O_BomoIG103636_complete:A_BomoIG_DN29862_c7_g3_i3
120bp
4040 O_BomoIG103637_complete:A_BomoIG_DN29862_c7_g3_i3
110bp
4041 O_BomoIG103638_complete:A_BomoIG_DN29862_c7_g3_i3
106bp
4042 O_BomoIG103639_complete:A_BomoIG_DN29862_c7_g3_i3
105bp
 Uncharacterised_protein_[Streptococcus_pneumoniae]
4043 O_BomoIG10363_complete:A_BomoIG_DN33725_c0_g8_i3
116bp
 unknown_unsecreted_protein_[Papilio_xuthus]
GO:0003674 F molecular_function
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0012507 C ER to Golgi transport vesicle membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030127 C COPII vesicle coat
GO:0031410 C cytoplasmic vesicle
GO:0033116 C endoplasmic reticulum-Golgi intermediate compartment membrane
GO:0070072 P vacuolar proton-transporting V-type ATPase complex assembly
4044 O_BomoIG103640_3prime_partial:A_BomoIG_DN29862_c7_g3_i4
405bp
 copper-transporting_ATPase_2_isoform_X3_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0000166 F nucleotide binding
GO:0004008 F P-type divalent copper transporter activity
GO:0005375 F copper ion transmembrane transporter activity
GO:0005507 F copper ion binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005770 C late endosome
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005923 C bicellular tight junction
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006812 P cation transport
GO:0006825 P copper ion transport
GO:0006878 P cellular copper ion homeostasis
GO:0006882 P cellular zinc ion homeostasis
GO:0007595 P lactation
GO:0007623 P circadian rhythm
GO:0008152 P metabolic process
GO:0008270 F zinc ion binding
GO:0010043 P response to zinc ion
GO:0015677 P copper ion import
GO:0015680 P protein maturation by copper ion transfer
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016023 C cytoplasmic vesicle
GO:0016323 C basolateral plasma membrane
GO:0016787 F hydrolase activity
GO:0019829 F ATPase-coupled cation transmembrane transporter activity
GO:0030001 P metal ion transport
GO:0032588 C trans-Golgi network membrane
GO:0034220 P ion transmembrane transport
GO:0035434 P copper ion transmembrane transport
GO:0043682 F P-type divalent copper transporter activity
GO:0046688 P response to copper ion
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0051208 P sequestering of calcium ion
GO:0051591 P response to cAMP
GO:0060003 P copper ion export
4045 O_BomoIG103641_5prime_partial:A_BomoIG_DN29862_c7_g3_i4
115bp
4046 O_BomoIG103642_complete:A_BomoIG_DN29862_c7_g3_i4
110bp
4047 O_BomoIG103643_3prime_partial:A_BomoIG_DN29862_c7_g1_i3
311bp
 uncharacterized_protein_LOC101742436_isoform_X1_[Bombyx_mori]
4048 O_BomoIG103644_5prime_partial:A_BomoIG_DN29862_c7_g1_i3
171bp
4049 O_BomoIG103645_complete:A_BomoIG_DN29862_c7_g1_i3
104bp
4050 O_BomoIG103646_complete:A_BomoIG_DN29862_c7_g3_i6
1221bp
 copper-transporting_ATPase_1_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001568 P blood vessel development
GO:0001701 P in utero embryonic development
GO:0001974 P blood vessel remodeling
GO:0002082 P regulation of oxidative phosphorylation
GO:0004008 F P-type divalent copper transporter activity
GO:0005375 F copper ion transmembrane transporter activity
GO:0005507 F copper ion binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005770 C late endosome
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006568 P tryptophan metabolic process
GO:0006584 P catecholamine metabolic process
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006812 P cation transport
GO:0006825 P copper ion transport
GO:0006878 P cellular copper ion homeostasis
GO:0007005 P mitochondrion organization
GO:0007595 P lactation
GO:0007626 P locomotory behavior
GO:0010041 P response to iron(III) ion
GO:0010043 P response to zinc ion
GO:0010273 P detoxification of copper ion
GO:0015677 P copper ion import
GO:0015679 P plasma membrane copper ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016323 C basolateral plasma membrane
GO:0016532 F superoxide dismutase copper chaperone activity
GO:0016787 F hydrolase activity
GO:0018205 P peptidyl-lysine modification
GO:0019430 P removal of superoxide radicals
GO:0019829 F ATPase-coupled cation transmembrane transporter activity
GO:0021702 P cerebellar Purkinje cell differentiation
GO:0021860 P pyramidal neuron development
GO:0021954 P central nervous system neuron development
GO:0030001 P metal ion transport
GO:0030140 C trans-Golgi network transport vesicle
GO:0030141 C secretory granule
GO:0030198 P extracellular matrix organization
GO:0030199 P collagen fibril organization
GO:0031069 P hair follicle morphogenesis
GO:0031526 C brush border membrane
GO:0032767 F copper-dependent protein binding
GO:0034220 P ion transmembrane transport
GO:0042093 P T-helper cell differentiation
GO:0042414 P epinephrine metabolic process
GO:0042415 P norepinephrine metabolic process
GO:0042417 P dopamine metabolic process
GO:0042428 P serotonin metabolic process
GO:0043005 C neuron projection
GO:0043025 C neuronal cell body
GO:0043085 P positive regulation of catalytic activity
GO:0043473 P pigmentation
GO:0043588 P skin development
GO:0046688 P response to copper ion
GO:0046872 F metal ion binding
GO:0048251 P elastic fiber assembly
GO:0048286 P lung alveolus development
GO:0048471 C perinuclear region of cytoplasm
GO:0048553 P negative regulation of catalytic activity
GO:0048554 P positive regulation of catalytic activity
GO:0048812 P neuron projection morphogenesis
GO:0051216 P cartilage development
GO:0051353 P positive regulation of oxidoreductase activity
GO:0051542 P elastin biosynthetic process
GO:0060003 P copper ion export
previous next from show/104180

- SilkBase 1999-2023 -