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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3931 O_BomoIG103539_5prime_partial:A_BomoIG_DN29808_c0_g1_i3
185bp
3932 O_BomoIG10353_3prime_partial:A_BomoIG_DN33725_c0_g2_i2
1097bp
 LOW_QUALITY_PROTEIN:_myosin_heavy_chain,_non-muscle_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000281 P mitotic cytokinesis
GO:0001736 P establishment of planar polarity
GO:0003774 F cytoskeletal motor activity
GO:0003779 F actin binding
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005938 C cell cortex
GO:0006936 P muscle contraction
GO:0007297 P ovarian follicle cell migration
GO:0007298 P border follicle cell migration
GO:0007391 P dorsal closure
GO:0007395 P dorsal closure, spreading of leading edge cells
GO:0007435 P salivary gland morphogenesis
GO:0007443 P Malpighian tubule morphogenesis
GO:0007496 P anterior midgut development
GO:0008152 P metabolic process
GO:0008258 P head involution
GO:0016203 P muscle attachment
GO:0016459 C myosin complex
GO:0016460 C myosin II complex
GO:0016461 C unconventional myosin complex
GO:0022008 P neurogenesis
GO:0030018 C Z disc
GO:0030239 P myofibril assembly
GO:0031036 P myosin II filament assembly
GO:0031252 C cell leading edge
GO:0032027 F myosin light chain binding
GO:0032154 C cleavage furrow
GO:0032507 P maintenance of protein location in cell
GO:0035017 P cuticle pattern formation
GO:0035072 P ecdysone-mediated induction of salivary gland cell autophagic cell death
GO:0035159 P regulation of tube length, open tracheal system
GO:0035277 P spiracle morphogenesis, open tracheal system
GO:0035317 P imaginal disc-derived wing hair organization
GO:0042060 P wound healing
GO:0042623 F ATP hydrolysis activity
GO:0044291 C cell-cell contact zone
GO:0045179 C apical cortex
GO:0045200 P establishment of neuroblast polarity
GO:0045214 P sarcomere organization
GO:0046663 P dorsal closure, leading edge cell differentiation
GO:0046664 P dorsal closure, amnioserosa morphology change
GO:0051259 P protein complex oligomerization
GO:0051726 P regulation of cell cycle
GO:0070938 C contractile ring
GO:0070986 P left/right axis specification
GO:0071260 P cellular response to mechanical stimulus
GO:1901739 P regulation of myoblast fusion
3933 O_BomoIG103540_5prime_partial:A_BomoIG_DN29808_c0_g1_i3
178bp
3934 O_BomoIG103541_5prime_partial:A_BomoIG_DN29808_c0_g1_i3
144bp
3935 O_BomoIG103542_complete:A_BomoIG_DN29808_c0_g1_i4
424bp
 mediator_of_RNA_polymerase_II_transcription_subunit_13_[Bombyx_mori]
GO:0001104 F transcription coregulator activity
GO:0004252 F serine-type endopeptidase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006508 P proteolysis
GO:0007275 P multicellular organism development
GO:0007526 P larval somatic muscle development
GO:0016592 C mediator complex
GO:0022416 P chaeta development
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0036011 P imaginal disc-derived leg segmentation
GO:0045165 P cell fate commitment
GO:0045498 P sex comb development
GO:0048190 P wing disc dorsal/ventral pattern formation
GO:0048749 P compound eye development
GO:0070847 C core mediator complex
3936 O_BomoIG103543_5prime_partial:A_BomoIG_DN29808_c0_g1_i4
241bp
3937 O_BomoIG103544_complete:A_BomoIG_DN29808_c0_g1_i4
115bp
3938 O_BomoIG103545_5prime_partial:A_BomoIG_DN29808_c0_g1_i4
109bp
3939 O_BomoIG103546_complete:A_BomoIG_DN29808_c0_g1_i5
212bp
 mediator_of_RNA_polymerase_2_transcription_subunit_13_like_protein_[Danaus_plexippus_plexippus]
GO:0001104 F transcription coregulator activity
GO:0004252 F serine-type endopeptidase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006508 P proteolysis
GO:0007275 P multicellular organism development
GO:0007526 P larval somatic muscle development
GO:0016592 C mediator complex
GO:0022416 P chaeta development
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0036011 P imaginal disc-derived leg segmentation
GO:0045165 P cell fate commitment
GO:0045498 P sex comb development
GO:0048190 P wing disc dorsal/ventral pattern formation
GO:0048749 P compound eye development
GO:0070847 C core mediator complex
3940 O_BomoIG103547_complete:A_BomoIG_DN29808_c0_g1_i6
429bp
 mediator_of_RNA_polymerase_II_transcription_subunit_13_[Bombyx_mori]
GO:0001104 F transcription coregulator activity
GO:0004252 F serine-type endopeptidase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006508 P proteolysis
GO:0007275 P multicellular organism development
GO:0007526 P larval somatic muscle development
GO:0016592 C mediator complex
GO:0022416 P chaeta development
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0036011 P imaginal disc-derived leg segmentation
GO:0045165 P cell fate commitment
GO:0045498 P sex comb development
GO:0048190 P wing disc dorsal/ventral pattern formation
GO:0048749 P compound eye development
GO:0070847 C core mediator complex
3941 O_BomoIG103548_5prime_partial:A_BomoIG_DN29808_c0_g1_i6
246bp
3942 O_BomoIG103549_complete:A_BomoIG_DN29808_c0_g1_i6
115bp
3943 O_BomoIG10354_complete:A_BomoIG_DN33725_c0_g2_i2
122bp
 hypothetical_protein_AX774_g2910_[Zancudomyces_culisetae]
3944 O_BomoIG103550_5prime_partial:A_BomoIG_DN29808_c0_g1_i6
114bp
3945 O_BomoIG103551_5prime_partial:A_BomoIG_DN29808_c0_g1_i6
102bp
3946 O_BomoIG103552_complete:A_BomoIG_DN29808_c0_g1_i7
451bp
 mediator_of_RNA_polymerase_II_transcription_subunit_13_[Bombyx_mori]
GO:0001104 F transcription coregulator activity
GO:0004252 F serine-type endopeptidase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006508 P proteolysis
GO:0007275 P multicellular organism development
GO:0007526 P larval somatic muscle development
GO:0016592 C mediator complex
GO:0022416 P chaeta development
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0036011 P imaginal disc-derived leg segmentation
GO:0045165 P cell fate commitment
GO:0045498 P sex comb development
GO:0048190 P wing disc dorsal/ventral pattern formation
GO:0048749 P compound eye development
GO:0070847 C core mediator complex
3947 O_BomoIG103553_5prime_partial:A_BomoIG_DN29808_c0_g1_i7
268bp
3948 O_BomoIG103554_5prime_partial:A_BomoIG_DN29808_c0_g1_i7
136bp
3949 O_BomoIG103555_5prime_partial:A_BomoIG_DN29808_c0_g1_i7
124bp
3950 O_BomoIG103556_complete:A_BomoIG_DN29808_c0_g1_i7
115bp
3951 O_BomoIG103557_complete:A_BomoIG_DN29808_c0_g1_i8
429bp
 mediator_of_RNA_polymerase_II_transcription_subunit_13_[Bombyx_mori]
GO:0001104 F transcription coregulator activity
GO:0004252 F serine-type endopeptidase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006508 P proteolysis
GO:0007275 P multicellular organism development
GO:0007526 P larval somatic muscle development
GO:0016592 C mediator complex
GO:0022416 P chaeta development
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0036011 P imaginal disc-derived leg segmentation
GO:0045165 P cell fate commitment
GO:0045498 P sex comb development
GO:0048190 P wing disc dorsal/ventral pattern formation
GO:0048749 P compound eye development
GO:0070847 C core mediator complex
3952 O_BomoIG103558_5prime_partial:A_BomoIG_DN29808_c0_g1_i8
246bp
3953 O_BomoIG103559_complete:A_BomoIG_DN29808_c0_g1_i8
115bp
3954 O_BomoIG10355_complete:A_BomoIG_DN33725_c0_g7_i2
131bp
 uncharacterized_protein_LOC101744608_[Bombyx_mori]
GO:0004129 F cytochrome-c oxidase activity
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005746 C mitochondrial respirasome
GO:0006091 P generation of precursor metabolites and energy
GO:0009055 F electron transfer activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:1902600 P proton transmembrane transport
3955 O_BomoIG103560_5prime_partial:A_BomoIG_DN29808_c0_g1_i8
114bp
3956 O_BomoIG103561_5prime_partial:A_BomoIG_DN29808_c0_g1_i8
102bp
3957 O_BomoIG103562_complete:A_BomoIG_DN29808_c0_g1_i9
365bp
 mediator_of_RNA_polymerase_II_transcription_subunit_13_[Bombyx_mori]
GO:0001104 F transcription coregulator activity
GO:0003712 F transcription coregulator activity
GO:0003713 F transcription coactivator activity
GO:0004872 F signaling receptor activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0016020 C membrane
GO:0016592 C mediator complex
GO:0030374 F nuclear receptor coactivator activity
GO:0030518 P intracellular steroid hormone receptor signaling pathway
GO:0030521 P androgen receptor signaling pathway
GO:0042632 P cholesterol homeostasis
GO:0042809 F vitamin D receptor binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046966 F thyroid hormone receptor binding
GO:0070328 P triglyceride homeostasis
GO:1904168 P negative regulation of DNA-binding transcription factor activity
3958 O_BomoIG103563_5prime_partial:A_BomoIG_DN29808_c0_g1_i9
268bp
3959 O_BomoIG103564_5prime_partial:A_BomoIG_DN29808_c0_g1_i9
136bp
3960 O_BomoIG103565_5prime_partial:A_BomoIG_DN29808_c0_g1_i9
124bp
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