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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2221 O_BomoIG1019_complete:A_BomoIG_DN30229_c1_g2_i9
456bp
 histone_acetyltransferase_Tip60_isoform_X2_[Bombyx_mori]
GO:0000123 C histone acetyltransferase complex
GO:0004402 F histone acetyltransferase activity
GO:0005634 C nucleus
GO:0005705 C polytene chromosome interband
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0007399 P nervous system development
GO:0010468 P regulation of gene expression
GO:0016568 P chromatin organization
GO:0016573 P histone acetylation
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0016747 F acyltransferase activity, transferring groups other than amino-acyl groups
GO:0035267 C NuA4 histone acetyltransferase complex
GO:0043486 P histone exchange
GO:0043524 P negative regulation of neuron apoptotic process
GO:0043967 P histone H4 acetylation
GO:0048167 P regulation of synaptic plasticity
GO:2000331 P regulation of terminal button organization
2222 O_BomoIG101_complete:A_BomoIG_DN30212_c3_g1_i7
139bp
 forkhead_box_sub-group_O_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007049 P cell cycle
GO:0007275 P multicellular organism development
GO:0008285 P negative regulation of cell population proliferation
GO:0010259 P multicellular organism aging
GO:0019216 P regulation of lipid metabolic process
GO:0030154 P cell differentiation
GO:0030308 P negative regulation of cell growth
GO:0040008 P regulation of growth
GO:0042593 P glucose homeostasis
GO:0043565 F sequence-specific DNA binding
GO:0046627 P negative regulation of insulin receptor signaling pathway
2223 O_BomoIG102000_complete:A_BomoIG_DN30733_c1_g1_i11
1462bp
 PREDICTED:_Down_syndrome_cell_adhesion_molecule-like_protein_Dscam2_[Amyelois_transitella]
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042802 F identical protein binding
GO:0048812 P neuron projection morphogenesis
2224 O_BomoIG102001_complete:A_BomoIG_DN30733_c1_g1_i11
128bp
2225 O_BomoIG102002_complete:A_BomoIG_DN30733_c1_g1_i12
1188bp
 PREDICTED:_Down_syndrome_cell_adhesion_molecule-like_protein_Dscam2_[Amyelois_transitella]
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007162 P negative regulation of cell adhesion
GO:0007399 P nervous system development
GO:0007416 P synapse assembly
GO:0007626 P locomotory behavior
GO:0010842 P retina layer formation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0030424 C axon
GO:0030426 C growth cone
GO:0042327 P positive regulation of phosphorylation
GO:0042995 C cell projection
GO:0045202 C synapse
GO:0048813 P dendrite morphogenesis
GO:0048842 P positive regulation of axon extension involved in axon guidance
GO:0060060 P post-embryonic retina morphogenesis in camera-type eye
GO:0060219 P camera-type eye photoreceptor cell differentiation
GO:0070593 P dendrite self-avoidance
2226 O_BomoIG102003_complete:A_BomoIG_DN30733_c1_g1_i12
184bp
 Down_syndrome_cell_adhesion_molecule-like_protein_Dscam2_[Bombyx_mori]
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042802 F identical protein binding
GO:0048812 P neuron projection morphogenesis
2227 O_BomoIG102004_complete:A_BomoIG_DN30733_c1_g1_i12
128bp
2228 O_BomoIG102005_complete:A_BomoIG_DN30733_c1_g1_i13
1068bp
 PREDICTED:_Down_syndrome_cell_adhesion_molecule-like_protein_Dscam2_[Amyelois_transitella]
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042802 F identical protein binding
GO:0048812 P neuron projection morphogenesis
2229 O_BomoIG102006_complete:A_BomoIG_DN30733_c1_g1_i14
228bp
 Down_syndrome_cell_adhesion_molecule-like_protein_Dscam2_[Bombyx_mori]
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042802 F identical protein binding
GO:0048812 P neuron projection morphogenesis
2230 O_BomoIG102007_complete:A_BomoIG_DN30733_c1_g1_i14
128bp
2231 O_BomoIG102008_complete:A_BomoIG_DN30733_c1_g1_i16
583bp
 Down_syndrome_cell_adhesion_molecule-like_protein_Dscam2_[Bombyx_mori]
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007162 P negative regulation of cell adhesion
GO:0007399 P nervous system development
GO:0007416 P synapse assembly
GO:0007626 P locomotory behavior
GO:0010842 P retina layer formation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0030424 C axon
GO:0030426 C growth cone
GO:0042327 P positive regulation of phosphorylation
GO:0042995 C cell projection
GO:0045202 C synapse
GO:0048813 P dendrite morphogenesis
GO:0048842 P positive regulation of axon extension involved in axon guidance
GO:0060060 P post-embryonic retina morphogenesis in camera-type eye
GO:0060219 P camera-type eye photoreceptor cell differentiation
GO:0070593 P dendrite self-avoidance
2232 O_BomoIG102009_complete:A_BomoIG_DN30733_c1_g1_i16
128bp
2233 O_BomoIG10200_3prime_partial:A_BomoIG_DN33760_c1_g1_i16
231bp
 tetratricopeptide_repeat_protein_7B_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0046854 P phosphatidylinositol phosphate biosynthetic process
GO:0090002 P protein localization to plasma membrane
2234 O_BomoIG102010_complete:A_BomoIG_DN30733_c1_g1_i17
315bp
 Down_syndrome_cell_adhesion_molecule-like_protein_Dscam2_[Bombyx_mori]
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042802 F identical protein binding
GO:0048812 P neuron projection morphogenesis
2235 O_BomoIG102011_complete:A_BomoIG_DN30733_c1_g1_i17
139bp
2236 O_BomoIG102012_complete:A_BomoIG_DN30733_c1_g2_i2
473bp
 egl_nine_homolog_1_[Bombyx_mori]
GO:0001666 P response to hypoxia
GO:0005506 F iron ion binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0016706 F 2-oxoglutarate-dependent dioxygenase activity
GO:0018401 P peptidyl-proline hydroxylation to 4-hydroxy-L-proline
GO:0019899 F enzyme binding
GO:0030821 P obsolete negative regulation of cAMP catabolic process
GO:0031418 F L-ascorbic acid binding
GO:0031543 F peptidyl-proline dioxygenase activity
GO:0031545 F peptidyl-proline 4-dioxygenase activity
GO:0032364 P oxygen homeostasis
GO:0043433 P negative regulation of DNA-binding transcription factor activity
GO:0045765 P regulation of angiogenesis
GO:0046872 F metal ion binding
GO:0051213 F dioxygenase activity
GO:0051344 P negative regulation of cyclic-nucleotide phosphodiesterase activity
GO:0055008 P cardiac muscle tissue morphogenesis
GO:0055114 P obsolete oxidation-reduction process
GO:0060347 P heart trabecula formation
GO:0060412 P ventricular septum morphogenesis
GO:0060711 P labyrinthine layer development
GO:0061418 P regulation of transcription from RNA polymerase II promoter in response to hypoxia
GO:0071731 P response to nitric oxide
2237 O_BomoIG102013_complete:A_BomoIG_DN30733_c1_g2_i3
473bp
 egl_nine_homolog_1_[Bombyx_mori]
GO:0001666 P response to hypoxia
GO:0005506 F iron ion binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0016706 F 2-oxoglutarate-dependent dioxygenase activity
GO:0018401 P peptidyl-proline hydroxylation to 4-hydroxy-L-proline
GO:0019899 F enzyme binding
GO:0030821 P obsolete negative regulation of cAMP catabolic process
GO:0031418 F L-ascorbic acid binding
GO:0031543 F peptidyl-proline dioxygenase activity
GO:0031545 F peptidyl-proline 4-dioxygenase activity
GO:0032364 P oxygen homeostasis
GO:0043433 P negative regulation of DNA-binding transcription factor activity
GO:0045765 P regulation of angiogenesis
GO:0046872 F metal ion binding
GO:0051213 F dioxygenase activity
GO:0051344 P negative regulation of cyclic-nucleotide phosphodiesterase activity
GO:0055008 P cardiac muscle tissue morphogenesis
GO:0055114 P obsolete oxidation-reduction process
GO:0060347 P heart trabecula formation
GO:0060412 P ventricular septum morphogenesis
GO:0060711 P labyrinthine layer development
GO:0061418 P regulation of transcription from RNA polymerase II promoter in response to hypoxia
GO:0071731 P response to nitric oxide
2238 O_BomoIG102014_complete:A_BomoIG_DN30733_c1_g1_i18
434bp
 Down_syndrome_cell_adhesion_molecule-like_protein_Dscam2_[Bombyx_mori]
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042802 F identical protein binding
GO:0048812 P neuron projection morphogenesis
2239 O_BomoIG102015_complete:A_BomoIG_DN30733_c1_g1_i18
139bp
2240 O_BomoIG102016_complete:A_BomoIG_DN30733_c1_g1_i19
228bp
 Down_syndrome_cell_adhesion_molecule-like_protein_Dscam2_[Bombyx_mori]
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042802 F identical protein binding
GO:0048812 P neuron projection morphogenesis
2241 O_BomoIG102017_complete:A_BomoIG_DN30733_c1_g1_i19
128bp
2242 O_BomoIG102018_complete:A_BomoIG_DN30733_c1_g1_i20
1188bp
 PREDICTED:_Down_syndrome_cell_adhesion_molecule-like_protein_Dscam2_[Amyelois_transitella]
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007162 P negative regulation of cell adhesion
GO:0007399 P nervous system development
GO:0007416 P synapse assembly
GO:0007626 P locomotory behavior
GO:0010842 P retina layer formation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0030424 C axon
GO:0030426 C growth cone
GO:0042327 P positive regulation of phosphorylation
GO:0042995 C cell projection
GO:0045202 C synapse
GO:0048813 P dendrite morphogenesis
GO:0048842 P positive regulation of axon extension involved in axon guidance
GO:0060060 P post-embryonic retina morphogenesis in camera-type eye
GO:0060219 P camera-type eye photoreceptor cell differentiation
GO:0070593 P dendrite self-avoidance
2243 O_BomoIG102019_complete:A_BomoIG_DN30733_c1_g1_i20
128bp
2244 O_BomoIG10201_5prime_partial:A_BomoIG_DN33760_c1_g1_i18
178bp
 uncharacterized_protein_LOC105841533_[Bombyx_mori]
2245 O_BomoIG102020_complete:A_BomoIG_DN30733_c1_g1_i21
1187bp
 PREDICTED:_Down_syndrome_cell_adhesion_molecule-like_protein_Dscam2_[Amyelois_transitella]
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042802 F identical protein binding
GO:0048812 P neuron projection morphogenesis
2246 O_BomoIG102021_3prime_partial:A_BomoIG_DN30737_c6_g1_i1
1431bp
 nuclear_pore_complex_protein_Nup98-Nup96_[Bombyx_mori]
GO:0000059 P obsolete protein import into nucleus, docking
GO:0000776 C kinetochore
GO:0000973 P posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery
GO:0003723 F RNA binding
GO:0005215 F transporter activity
GO:0005487 F structural constituent of nuclear pore
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005643 C nuclear pore
GO:0005654 C nucleoplasm
GO:0005829 C cytosol
GO:0006260 P DNA replication
GO:0006405 P RNA export from nucleus
GO:0006406 P mRNA export from nucleus
GO:0006409 P tRNA export from nucleus
GO:0006810 P transport
GO:0006913 P nucleocytoplasmic transport
GO:0006999 P nuclear pore organization
GO:0007062 P sister chromatid cohesion
GO:0007077 P mitotic nuclear membrane disassembly
GO:0008139 F nuclear localization sequence binding
GO:0010827 P regulation of glucose transmembrane transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016032 P viral process
GO:0016925 P protein sumoylation
GO:0017056 F structural constituent of nuclear pore
GO:0019083 P viral transcription
GO:0031047 P gene silencing by RNA
GO:0031080 C nuclear pore outer ring
GO:0031965 C nuclear membrane
GO:0034398 P telomere tethering at nuclear periphery
GO:0034399 C nuclear periphery
GO:0042277 F peptide binding
GO:0042405 C nuclear inclusion body
GO:0044614 C nuclear pore cytoplasmic filaments
GO:0044615 C nuclear pore nuclear basket
GO:0051028 P mRNA transport
GO:0051292 P nuclear pore complex assembly
GO:0075733 P intracellular transport of virus
GO:1900034 P regulation of cellular response to heat
2247 O_BomoIG102022_complete:A_BomoIG_DN30737_c6_g1_i1
214bp
2248 O_BomoIG102023_complete:A_BomoIG_DN30737_c6_g1_i1
207bp
2249 O_BomoIG102024_complete:A_BomoIG_DN30737_c6_g1_i1
184bp
2250 O_BomoIG102025_5prime_partial:A_BomoIG_DN30737_c6_g1_i1
178bp
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