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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2251 O_BomoIG102026_complete:A_BomoIG_DN30737_c6_g1_i1
142bp
2252 O_BomoIG102027_complete:A_BomoIG_DN30737_c6_g1_i1
140bp
2253 O_BomoIG102028_complete:A_BomoIG_DN30737_c6_g1_i1
108bp
2254 O_BomoIG102029_complete:A_BomoIG_DN30737_c6_g1_i2
330bp
 nuclear_pore_complex_protein_Nup98-Nup96_[Bombyx_mori]
GO:0000059 P obsolete protein import into nucleus, docking
GO:0000776 C kinetochore
GO:0000973 P posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery
GO:0003723 F RNA binding
GO:0005215 F transporter activity
GO:0005487 F structural constituent of nuclear pore
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005643 C nuclear pore
GO:0005654 C nucleoplasm
GO:0005829 C cytosol
GO:0006260 P DNA replication
GO:0006405 P RNA export from nucleus
GO:0006406 P mRNA export from nucleus
GO:0006409 P tRNA export from nucleus
GO:0006810 P transport
GO:0006913 P nucleocytoplasmic transport
GO:0006999 P nuclear pore organization
GO:0007062 P sister chromatid cohesion
GO:0007077 P mitotic nuclear membrane disassembly
GO:0008139 F nuclear localization sequence binding
GO:0010827 P regulation of glucose transmembrane transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016032 P viral process
GO:0016925 P protein sumoylation
GO:0017056 F structural constituent of nuclear pore
GO:0019083 P viral transcription
GO:0031047 P gene silencing by RNA
GO:0031080 C nuclear pore outer ring
GO:0031965 C nuclear membrane
GO:0034398 P telomere tethering at nuclear periphery
GO:0034399 C nuclear periphery
GO:0042277 F peptide binding
GO:0042405 C nuclear inclusion body
GO:0044614 C nuclear pore cytoplasmic filaments
GO:0044615 C nuclear pore nuclear basket
GO:0051028 P mRNA transport
GO:0051292 P nuclear pore complex assembly
GO:0075733 P intracellular transport of virus
GO:1900034 P regulation of cellular response to heat
2255 O_BomoIG10202_3prime_partial:A_BomoIG_DN33760_c1_g1_i18
169bp
2256 O_BomoIG102030_complete:A_BomoIG_DN30737_c6_g1_i2
207bp
2257 O_BomoIG102031_complete:A_BomoIG_DN30737_c6_g1_i2
140bp
2258 O_BomoIG102032_3prime_partial:A_BomoIG_DN30737_c6_g1_i3
628bp
 nuclear_pore_complex_protein_Nup98-Nup96_[Bombyx_mori]
GO:0000059 P obsolete protein import into nucleus, docking
GO:0000776 C kinetochore
GO:0000973 P posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery
GO:0003723 F RNA binding
GO:0005215 F transporter activity
GO:0005487 F structural constituent of nuclear pore
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005643 C nuclear pore
GO:0005654 C nucleoplasm
GO:0005829 C cytosol
GO:0006260 P DNA replication
GO:0006405 P RNA export from nucleus
GO:0006406 P mRNA export from nucleus
GO:0006409 P tRNA export from nucleus
GO:0006810 P transport
GO:0006913 P nucleocytoplasmic transport
GO:0006999 P nuclear pore organization
GO:0007062 P sister chromatid cohesion
GO:0007077 P mitotic nuclear membrane disassembly
GO:0008139 F nuclear localization sequence binding
GO:0010827 P regulation of glucose transmembrane transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016032 P viral process
GO:0016925 P protein sumoylation
GO:0017056 F structural constituent of nuclear pore
GO:0019083 P viral transcription
GO:0031047 P gene silencing by RNA
GO:0031080 C nuclear pore outer ring
GO:0031965 C nuclear membrane
GO:0034398 P telomere tethering at nuclear periphery
GO:0034399 C nuclear periphery
GO:0042277 F peptide binding
GO:0042405 C nuclear inclusion body
GO:0044614 C nuclear pore cytoplasmic filaments
GO:0044615 C nuclear pore nuclear basket
GO:0051028 P mRNA transport
GO:0051292 P nuclear pore complex assembly
GO:0075733 P intracellular transport of virus
GO:1900034 P regulation of cellular response to heat
2259 O_BomoIG102033_5prime_partial:A_BomoIG_DN30737_c6_g1_i3
178bp
2260 O_BomoIG102034_complete:A_BomoIG_DN30737_c6_g1_i3
142bp
2261 O_BomoIG102035_complete:A_BomoIG_DN30737_c6_g1_i3
108bp
2262 O_BomoIG102036_complete:A_BomoIG_DN30737_c6_g1_i4
300bp
 nuclear_pore_complex_protein_Nup98-Nup96_[Bombyx_mori]
GO:0000059 P obsolete protein import into nucleus, docking
GO:0000776 C kinetochore
GO:0000973 P posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery
GO:0003723 F RNA binding
GO:0005487 F structural constituent of nuclear pore
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005643 C nuclear pore
GO:0005654 C nucleoplasm
GO:0006260 P DNA replication
GO:0006405 P RNA export from nucleus
GO:0006810 P transport
GO:0008139 F nuclear localization sequence binding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0017056 F structural constituent of nuclear pore
GO:0031080 C nuclear pore outer ring
GO:0031965 C nuclear membrane
GO:0034398 P telomere tethering at nuclear periphery
GO:0034399 C nuclear periphery
GO:0042277 F peptide binding
GO:0042405 C nuclear inclusion body
GO:0044614 C nuclear pore cytoplasmic filaments
GO:0044615 C nuclear pore nuclear basket
GO:0051028 P mRNA transport
GO:0051292 P nuclear pore complex assembly
2263 O_BomoIG102037_complete:A_BomoIG_DN30737_c6_g1_i4
214bp
2264 O_BomoIG102038_complete:A_BomoIG_DN30737_c6_g1_i4
184bp
2265 O_BomoIG102039_3prime_partial:A_BomoIG_DN30737_c6_g1_i5
1431bp
 nuclear_pore_complex_protein_Nup98-Nup96_[Bombyx_mori]
GO:0000059 P obsolete protein import into nucleus, docking
GO:0000776 C kinetochore
GO:0000973 P posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery
GO:0003723 F RNA binding
GO:0005215 F transporter activity
GO:0005487 F structural constituent of nuclear pore
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005643 C nuclear pore
GO:0005654 C nucleoplasm
GO:0005829 C cytosol
GO:0006260 P DNA replication
GO:0006405 P RNA export from nucleus
GO:0006406 P mRNA export from nucleus
GO:0006409 P tRNA export from nucleus
GO:0006810 P transport
GO:0006913 P nucleocytoplasmic transport
GO:0006999 P nuclear pore organization
GO:0007062 P sister chromatid cohesion
GO:0007077 P mitotic nuclear membrane disassembly
GO:0008139 F nuclear localization sequence binding
GO:0010827 P regulation of glucose transmembrane transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016032 P viral process
GO:0016925 P protein sumoylation
GO:0017056 F structural constituent of nuclear pore
GO:0019083 P viral transcription
GO:0031047 P gene silencing by RNA
GO:0031080 C nuclear pore outer ring
GO:0031965 C nuclear membrane
GO:0034398 P telomere tethering at nuclear periphery
GO:0034399 C nuclear periphery
GO:0042277 F peptide binding
GO:0042405 C nuclear inclusion body
GO:0044614 C nuclear pore cytoplasmic filaments
GO:0044615 C nuclear pore nuclear basket
GO:0051028 P mRNA transport
GO:0051292 P nuclear pore complex assembly
GO:0075733 P intracellular transport of virus
GO:1900034 P regulation of cellular response to heat
2266 O_BomoIG10203_complete:A_BomoIG_DN33760_c1_g1_i19
198bp
 tetratricopeptide_repeat_protein_7B_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0046854 P phosphatidylinositol phosphate biosynthetic process
GO:0090002 P protein localization to plasma membrane
2267 O_BomoIG102040_complete:A_BomoIG_DN30737_c6_g1_i5
207bp
2268 O_BomoIG102041_complete:A_BomoIG_DN30737_c6_g1_i5
184bp
2269 O_BomoIG102042_complete:A_BomoIG_DN30737_c6_g1_i5
184bp
2270 O_BomoIG102043_5prime_partial:A_BomoIG_DN30737_c6_g1_i5
178bp
2271 O_BomoIG102044_complete:A_BomoIG_DN30737_c6_g1_i5
142bp
2272 O_BomoIG102045_complete:A_BomoIG_DN30737_c6_g1_i5
140bp
2273 O_BomoIG102046_complete:A_BomoIG_DN30737_c6_g1_i5
108bp
2274 O_BomoIG102047_complete:A_BomoIG_DN30737_c7_g4_i2
201bp
 zinc_finger_SWIM_domain-containing_protein_8_isoform_X2_[Bombyx_mori]
2275 O_BomoIG102048_5prime_partial:A_BomoIG_DN30737_c7_g4_i3
621bp
 zinc_finger_SWIM_domain-containing_protein_8_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
2276 O_BomoIG102049_internal:A_BomoIG_DN30737_c7_g4_i4
627bp
 zinc_finger_SWIM_domain-containing_protein_8_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
2277 O_BomoIG10204_internal:A_BomoIG_DN33760_c1_g1_i20
159bp
2278 O_BomoIG102050_3prime_partial:A_BomoIG_DN30737_c7_g4_i4
100bp
2279 O_BomoIG102051_complete:A_BomoIG_DN30714_c2_g6_i1
110bp
2280 O_BomoIG102052_5prime_partial:A_BomoIG_DN30714_c2_g11_i1
268bp
 juvenile_hormone_epoxide_hydrolase_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0019439 P aromatic compound catabolic process
GO:0031090 C organelle membrane
GO:0033961 F cis-stilbene-oxide hydrolase activity
GO:0043231 C intracellular membrane-bounded organelle
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