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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2191 O_BomoIG101973_complete:A_BomoIG_DN30736_c7_g1_i4
105bp
2192 O_BomoIG101974_complete:A_BomoIG_DN30736_c7_g1_i5
384bp
 glutamine_synthetase_2_cytoplasmic_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0004356 F glutamate-ammonia ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006538 P glutamate catabolic process
GO:0006542 P glutamine biosynthetic process
GO:0006807 P nitrogen compound metabolic process
GO:0007416 P synapse assembly
GO:0016874 F ligase activity
GO:0045213 P neurotransmitter receptor metabolic process
2193 O_BomoIG101975_complete:A_BomoIG_DN30736_c7_g1_i5
105bp
2194 O_BomoIG101976_internal:A_BomoIG_DN30736_c7_g2_i2
123bp
 uncharacterized_protein_LOC101744296_[Bombyx_mori]
2195 O_BomoIG101977_5prime_partial:A_BomoIG_DN30733_c0_g1_i1
401bp
 C-1-tetrahydrofolate_synthase,_cytoplasmic_isoform_X1_[Bombyx_mori]
GO:0000105 P histidine biosynthetic process
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0004329 F formate-tetrahydrofolate ligase activity
GO:0004477 F methenyltetrahydrofolate cyclohydrolase activity
GO:0004488 F methylenetetrahydrofolate dehydrogenase (NADP+) activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006164 P purine nucleotide biosynthetic process
GO:0006730 P one-carbon metabolic process
GO:0008152 P metabolic process
GO:0008652 P cellular amino acid biosynthetic process
GO:0009086 P methionine biosynthetic process
GO:0009396 P folic acid-containing compound biosynthetic process
GO:0016491 F oxidoreductase activity
GO:0016787 F hydrolase activity
GO:0016874 F ligase activity
GO:0035999 P tetrahydrofolate interconversion
GO:0055114 P obsolete oxidation-reduction process
2196 O_BomoIG101978_3prime_partial:A_BomoIG_DN30733_c0_g1_i1
214bp
 Uncharacterised_protein_[Mycobacterium_abscessus_subsp._abscessus]
2197 O_BomoIG101979_complete:A_BomoIG_DN30733_c0_g1_i1
100bp
2198 O_BomoIG10197_5prime_partial:A_BomoIG_DN33760_c1_g1_i13
178bp
 uncharacterized_protein_LOC105841533_[Bombyx_mori]
2199 O_BomoIG101980_5prime_partial:A_BomoIG_DN30733_c0_g1_i2
467bp
 C-1-tetrahydrofolate_synthase,_cytoplasmic_isoform_X2_[Bombyx_mori]
GO:0000105 P histidine biosynthetic process
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0004329 F formate-tetrahydrofolate ligase activity
GO:0004477 F methenyltetrahydrofolate cyclohydrolase activity
GO:0004488 F methylenetetrahydrofolate dehydrogenase (NADP+) activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006164 P purine nucleotide biosynthetic process
GO:0006730 P one-carbon metabolic process
GO:0008152 P metabolic process
GO:0008652 P cellular amino acid biosynthetic process
GO:0009086 P methionine biosynthetic process
GO:0009396 P folic acid-containing compound biosynthetic process
GO:0016491 F oxidoreductase activity
GO:0016787 F hydrolase activity
GO:0016874 F ligase activity
GO:0035999 P tetrahydrofolate interconversion
GO:0055114 P obsolete oxidation-reduction process
2200 O_BomoIG101981_3prime_partial:A_BomoIG_DN30733_c0_g1_i2
214bp
 Uncharacterised_protein_[Mycobacterium_abscessus_subsp._abscessus]
2201 O_BomoIG101982_complete:A_BomoIG_DN30733_c0_g1_i2
100bp
2202 O_BomoIG101983_internal:A_BomoIG_DN30733_c0_g3_i2
144bp
 C-1-tetrahydrofolate_synthase_[Bombyx_mori]
GO:0000105 P histidine biosynthetic process
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0004329 F formate-tetrahydrofolate ligase activity
GO:0004477 F methenyltetrahydrofolate cyclohydrolase activity
GO:0004488 F methylenetetrahydrofolate dehydrogenase (NADP+) activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006164 P purine nucleotide biosynthetic process
GO:0006730 P one-carbon metabolic process
GO:0008152 P metabolic process
GO:0008652 P cellular amino acid biosynthetic process
GO:0009086 P methionine biosynthetic process
GO:0009396 P folic acid-containing compound biosynthetic process
GO:0016491 F oxidoreductase activity
GO:0016787 F hydrolase activity
GO:0016874 F ligase activity
GO:0035999 P tetrahydrofolate interconversion
GO:0055114 P obsolete oxidation-reduction process
2203 O_BomoIG101984_5prime_partial:A_BomoIG_DN30733_c0_g1_i3
293bp
 C-1-tetrahydrofolate_synthase,_cytoplasmic_isoform_X1_[Bombyx_mori]
GO:0000105 P histidine biosynthetic process
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0004329 F formate-tetrahydrofolate ligase activity
GO:0004477 F methenyltetrahydrofolate cyclohydrolase activity
GO:0004488 F methylenetetrahydrofolate dehydrogenase (NADP+) activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006164 P purine nucleotide biosynthetic process
GO:0006730 P one-carbon metabolic process
GO:0008152 P metabolic process
GO:0008652 P cellular amino acid biosynthetic process
GO:0009086 P methionine biosynthetic process
GO:0009396 P folic acid-containing compound biosynthetic process
GO:0016491 F oxidoreductase activity
GO:0016787 F hydrolase activity
GO:0016874 F ligase activity
GO:0035999 P tetrahydrofolate interconversion
GO:0055114 P obsolete oxidation-reduction process
2204 O_BomoIG101985_complete:A_BomoIG_DN30733_c0_g1_i3
100bp
2205 O_BomoIG101986_internal:A_BomoIG_DN30733_c0_g3_i3
510bp
 C-1-tetrahydrofolate_synthase,_cytoplasmic_isoform_X2_[Bombyx_mori]
GO:0000105 P histidine biosynthetic process
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0004329 F formate-tetrahydrofolate ligase activity
GO:0004477 F methenyltetrahydrofolate cyclohydrolase activity
GO:0004488 F methylenetetrahydrofolate dehydrogenase (NADP+) activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006164 P purine nucleotide biosynthetic process
GO:0006730 P one-carbon metabolic process
GO:0008152 P metabolic process
GO:0008652 P cellular amino acid biosynthetic process
GO:0009086 P methionine biosynthetic process
GO:0009396 P folic acid-containing compound biosynthetic process
GO:0016491 F oxidoreductase activity
GO:0016787 F hydrolase activity
GO:0016874 F ligase activity
GO:0035999 P tetrahydrofolate interconversion
GO:0055114 P obsolete oxidation-reduction process
2206 O_BomoIG101987_3prime_partial:A_BomoIG_DN30733_c0_g3_i4
475bp
 C-1-tetrahydrofolate_synthase,_cytoplasmic_isoform_X1_[Bombyx_mori]
GO:0000105 P histidine biosynthetic process
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0004329 F formate-tetrahydrofolate ligase activity
GO:0004477 F methenyltetrahydrofolate cyclohydrolase activity
GO:0004488 F methylenetetrahydrofolate dehydrogenase (NADP+) activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006164 P purine nucleotide biosynthetic process
GO:0006730 P one-carbon metabolic process
GO:0008152 P metabolic process
GO:0008652 P cellular amino acid biosynthetic process
GO:0009086 P methionine biosynthetic process
GO:0009396 P folic acid-containing compound biosynthetic process
GO:0016491 F oxidoreductase activity
GO:0016787 F hydrolase activity
GO:0016874 F ligase activity
GO:0035999 P tetrahydrofolate interconversion
GO:0055114 P obsolete oxidation-reduction process
2207 O_BomoIG101988_5prime_partial:A_BomoIG_DN30733_c0_g3_i5
410bp
 C-1-tetrahydrofolate_synthase,_cytoplasmic_isoform_X2_[Bombyx_mori]
GO:0000105 P histidine biosynthetic process
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0004329 F formate-tetrahydrofolate ligase activity
GO:0004477 F methenyltetrahydrofolate cyclohydrolase activity
GO:0004488 F methylenetetrahydrofolate dehydrogenase (NADP+) activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006164 P purine nucleotide biosynthetic process
GO:0006730 P one-carbon metabolic process
GO:0008152 P metabolic process
GO:0008652 P cellular amino acid biosynthetic process
GO:0009086 P methionine biosynthetic process
GO:0009396 P folic acid-containing compound biosynthetic process
GO:0016491 F oxidoreductase activity
GO:0016787 F hydrolase activity
GO:0016874 F ligase activity
GO:0035999 P tetrahydrofolate interconversion
GO:0055114 P obsolete oxidation-reduction process
2208 O_BomoIG101989_5prime_partial:A_BomoIG_DN30733_c0_g1_i4
230bp
 C-1-tetrahydrofolate_synthase,_cytoplasmic_isoform_X1_[Bombyx_mori]
GO:0000105 P histidine biosynthetic process
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0004329 F formate-tetrahydrofolate ligase activity
GO:0004477 F methenyltetrahydrofolate cyclohydrolase activity
GO:0004488 F methylenetetrahydrofolate dehydrogenase (NADP+) activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006164 P purine nucleotide biosynthetic process
GO:0006730 P one-carbon metabolic process
GO:0008152 P metabolic process
GO:0008652 P cellular amino acid biosynthetic process
GO:0009086 P methionine biosynthetic process
GO:0009396 P folic acid-containing compound biosynthetic process
GO:0016491 F oxidoreductase activity
GO:0016787 F hydrolase activity
GO:0016874 F ligase activity
GO:0035999 P tetrahydrofolate interconversion
GO:0055114 P obsolete oxidation-reduction process
2209 O_BomoIG10198_3prime_partial:A_BomoIG_DN33760_c1_g1_i13
169bp
2210 O_BomoIG101990_3prime_partial:A_BomoIG_DN30733_c0_g1_i4
210bp
 Uncharacterised_protein_[Mycobacterium_abscessus_subsp._abscessus]
2211 O_BomoIG101991_complete:A_BomoIG_DN30733_c1_g1_i3
424bp
 Down_syndrome_cell_adhesion_molecule-like_protein_Dscam2_[Bombyx_mori]
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007162 P negative regulation of cell adhesion
GO:0007399 P nervous system development
GO:0007416 P synapse assembly
GO:0007626 P locomotory behavior
GO:0010842 P retina layer formation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0030424 C axon
GO:0030426 C growth cone
GO:0042327 P positive regulation of phosphorylation
GO:0042995 C cell projection
GO:0045202 C synapse
GO:0048813 P dendrite morphogenesis
GO:0048842 P positive regulation of axon extension involved in axon guidance
GO:0060060 P post-embryonic retina morphogenesis in camera-type eye
GO:0060219 P camera-type eye photoreceptor cell differentiation
GO:0070593 P dendrite self-avoidance
2212 O_BomoIG101992_complete:A_BomoIG_DN30733_c1_g2_i1
445bp
 egl_nine_homolog_1_[Bombyx_mori]
GO:0001666 P response to hypoxia
GO:0005506 F iron ion binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0016706 F 2-oxoglutarate-dependent dioxygenase activity
GO:0018401 P peptidyl-proline hydroxylation to 4-hydroxy-L-proline
GO:0019899 F enzyme binding
GO:0030821 P obsolete negative regulation of cAMP catabolic process
GO:0031418 F L-ascorbic acid binding
GO:0031543 F peptidyl-proline dioxygenase activity
GO:0031545 F peptidyl-proline 4-dioxygenase activity
GO:0032364 P oxygen homeostasis
GO:0043433 P negative regulation of DNA-binding transcription factor activity
GO:0045765 P regulation of angiogenesis
GO:0046872 F metal ion binding
GO:0051213 F dioxygenase activity
GO:0051344 P negative regulation of cyclic-nucleotide phosphodiesterase activity
GO:0055008 P cardiac muscle tissue morphogenesis
GO:0055114 P obsolete oxidation-reduction process
GO:0060347 P heart trabecula formation
GO:0060412 P ventricular septum morphogenesis
GO:0060711 P labyrinthine layer development
GO:0061418 P regulation of transcription from RNA polymerase II promoter in response to hypoxia
GO:0071731 P response to nitric oxide
2213 O_BomoIG101993_complete:A_BomoIG_DN30733_c1_g1_i5
1343bp
 PREDICTED:_Down_syndrome_cell_adhesion_molecule-like_protein_Dscam2_[Amyelois_transitella]
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042802 F identical protein binding
GO:0048812 P neuron projection morphogenesis
2214 O_BomoIG101994_complete:A_BomoIG_DN30733_c1_g1_i5
128bp
2215 O_BomoIG101995_complete:A_BomoIG_DN30733_c1_g1_i7
892bp
 PREDICTED:_Down_syndrome_cell_adhesion_molecule-like_protein_Dscam2_[Amyelois_transitella]
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042802 F identical protein binding
GO:0048812 P neuron projection morphogenesis
2216 O_BomoIG101996_complete:A_BomoIG_DN30733_c1_g1_i8
773bp
 PREDICTED:_Down_syndrome_cell_adhesion_molecule-like_protein_Dscam2_[Amyelois_transitella]
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042802 F identical protein binding
GO:0048812 P neuron projection morphogenesis
2217 O_BomoIG101997_complete:A_BomoIG_DN30733_c1_g1_i9
765bp
 Down_syndrome_cell_adhesion_molecule-like_protein_Dscam2_[Bombyx_mori]
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042802 F identical protein binding
GO:0048812 P neuron projection morphogenesis
2218 O_BomoIG101998_complete:A_BomoIG_DN30733_c1_g1_i9
128bp
2219 O_BomoIG101999_complete:A_BomoIG_DN30733_c1_g1_i10
176bp
 Down_syndrome_cell_adhesion_molecule-like_protein_Dscam2_[Bombyx_mori]
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007162 P negative regulation of cell adhesion
GO:0007399 P nervous system development
GO:0007416 P synapse assembly
GO:0007626 P locomotory behavior
GO:0010842 P retina layer formation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0030424 C axon
GO:0030426 C growth cone
GO:0042327 P positive regulation of phosphorylation
GO:0042995 C cell projection
GO:0045202 C synapse
GO:0048813 P dendrite morphogenesis
GO:0048842 P positive regulation of axon extension involved in axon guidance
GO:0060060 P post-embryonic retina morphogenesis in camera-type eye
GO:0060219 P camera-type eye photoreceptor cell differentiation
GO:0070593 P dendrite self-avoidance
2220 O_BomoIG10199_internal:A_BomoIG_DN33760_c1_g1_i15
117bp
 PREDICTED:_uncharacterized_protein_LOC106141856_[Amyelois_transitella]
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